RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 IPO5O00410 1097 aaKnown RBP19.13■□□□□ 0.65
HIF3A-211ENST00000528563 ATG7O95352 703 aa19.13■□□□□ 0.65
HIF3A-211ENST00000528563 HOXC8P31273 242 aa19.13■□□□□ 0.65
HIF3A-211ENST00000528563 LRIT3Q3SXY7 679 aa19.13■□□□□ 0.65
HIF3A-211ENST00000528563 PRR16Q569H4 304 aa19.13■□□□□ 0.65
HIF3A-211ENST00000528563 LLPHQ9BRT6 129 aaKnown RBP19.13■□□□□ 0.65
HIF3A-211ENST00000528563 BACH2Q9BYV9 841 aa19.13■□□□□ 0.65
HIF3A-211ENST00000528563 RNPEPQ9H4A4 650 aa19.13■□□□□ 0.65
HIF3A-211ENST00000528563 NOD1Q9Y239 953 aa19.13■□□□□ 0.65
HIF3A-211ENST00000528563 CYP3A7-CYP3A51PA0A087WV96 503 aa19.12■□□□□ 0.65
HIF3A-211ENST00000528563 LGR5O75473 907 aa19.12■□□□□ 0.65
HIF3A-211ENST00000528563 CYP3A7P24462 503 aa19.12■□□□□ 0.65
HIF3A-211ENST00000528563 CCL23P55773 120 aa19.12■□□□□ 0.65
HIF3A-211ENST00000528563 ACTR2P61160 394 aa19.12■□□□□ 0.65
HIF3A-211ENST00000528563 ZNF200P98182 395 aaPredicted RBP19.12■□□□□ 0.65
HIF3A-211ENST00000528563 SETQ01105 290 aaPredicted RBP19.12■□□□□ 0.65
HIF3A-211ENST00000528563 PPIGQ13427 754 aaKnown RBP eCLIP19.12■□□□□ 0.65
HIF3A-211ENST00000528563 KRT25Q7Z3Z0 450 aa19.12■□□□□ 0.65
HIF3A-211ENST00000528563 CCDC83Q8IWF9 413 aa19.12■□□□□ 0.65
HIF3A-211ENST00000528563 OXER1Q8TDS5 423 aa19.12■□□□□ 0.65
HIF3A-211ENST00000528563 PCYT2Q99447 389 aa19.12■□□□□ 0.65
HIF3A-211ENST00000528563 ZNF577Q9BSK1 485 aa19.12■□□□□ 0.65
HIF3A-211ENST00000528563 TBC1D22BQ9NU19 505 aa19.12■□□□□ 0.65
HIF3A-211ENST00000528563 ZNF215Q9UL58 517 aaPredicted RBP19.12■□□□□ 0.65
HIF3A-211ENST00000528563 PITPNM1O00562 1244 aa19.11■□□□□ 0.65
HIF3A-211ENST00000528563 CCNE2O96020 404 aa19.11■□□□□ 0.65
HIF3A-211ENST00000528563 SMIM10L2AP0DMW4 78 aa19.11■□□□□ 0.65
HIF3A-211ENST00000528563 SMIM10L2BP0DMW5 78 aa19.11■□□□□ 0.65
HIF3A-211ENST00000528563 NONOQ15233 471 aaKnown RBP eCLIP19.11■□□□□ 0.65
HIF3A-211ENST00000528563 DHX38Q92620 1227 aaKnown RBP19.11■□□□□ 0.65
HIF3A-211ENST00000528563 VWCEQ96DN2 955 aa19.11■□□□□ 0.65
HIF3A-211ENST00000528563 UIMC1Q96RL1 719 aa19.11■□□□□ 0.65
HIF3A-211ENST00000528563 SMARCAD1Q9H4L7 1026 aa19.11■□□□□ 0.65
HIF3A-211ENST00000528563 SOX1O00570 391 aaPredicted RBP19.1■□□□□ 0.65
HIF3A-211ENST00000528563 ADAM17P78536 824 aa19.1■□□□□ 0.65
HIF3A-211ENST00000528563 PTK7Q13308 1070 aa19.1■□□□□ 0.65
HIF3A-211ENST00000528563 BFSP2Q13515 415 aa19.1■□□□□ 0.65
HIF3A-211ENST00000528563 INF2Q27J81 1249 aa19.1■□□□□ 0.65
HIF3A-211ENST00000528563 TMEM240Q5SV17 173 aa19.1■□□□□ 0.65
HIF3A-211ENST00000528563 MBOAT7Q96N66 472 aa19.1■□□□□ 0.65
HIF3A-211ENST00000528563 IL23AQ9NPF7 189 aa19.1■□□□□ 0.65
HIF3A-211ENST00000528563 ERAP1Q9NZ08 941 aa19.1■□□□□ 0.65
HIF3A-211ENST00000528563 EMSYQ7Z589 1322 aa19.1■□□□□ 0.65
HIF3A-211ENST00000528563 TRIP12Q14669 1992 aaPredicted RBP19.1■□□□□ 0.65
HIF3A-211ENST00000528563 IGKV6D-21A0A0A0MT36 114 aa19.09■□□□□ 0.65
HIF3A-211ENST00000528563 C17orf102A2RUQ5 167 aa19.09■□□□□ 0.65
HIF3A-211ENST00000528563 MSH4O15457 936 aa19.09■□□□□ 0.65
HIF3A-211ENST00000528563 ST18O60284 1047 aa19.09■□□□□ 0.65
HIF3A-211ENST00000528563 RBL2Q08999 1139 aa19.09■□□□□ 0.65
HIF3A-211ENST00000528563 TRIM71Q2Q1W2 868 aaKnown RBP19.09■□□□□ 0.65
HIF3A-211ENST00000528563 Q4G0T1 1027 aa19.09■□□□□ 0.65
HIF3A-211ENST00000528563 MOXD1Q6UVY6 613 aa19.09■□□□□ 0.65
HIF3A-211ENST00000528563 ABHD15Q6UXT9 468 aa19.09■□□□□ 0.65
HIF3A-211ENST00000528563 SERINC5Q86VE9 423 aa19.09■□□□□ 0.65
HIF3A-211ENST00000528563 RETREG2Q8NC44 543 aa19.09■□□□□ 0.65
HIF3A-211ENST00000528563 CAGE1Q8TC20 777 aa19.09■□□□□ 0.65
HIF3A-211ENST00000528563 GLG1Q92896 1179 aa19.09■□□□□ 0.65
HIF3A-211ENST00000528563 SCLYQ96I15 445 aa19.09■□□□□ 0.65
HIF3A-211ENST00000528563 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.09■□□□□ 0.65
HIF3A-211ENST00000528563 SETD4Q9NVD3 440 aa19.09■□□□□ 0.65
HIF3A-211ENST00000528563 CCDC194A0A1B0GVG4 234 aa19.09■□□□□ 0.65
HIF3A-211ENST00000528563 DDX39AO00148 427 aaKnown RBP19.09■□□□□ 0.65
HIF3A-211ENST00000528563 IQCF3P0C7M6 154 aa19.09■□□□□ 0.65
HIF3A-211ENST00000528563 ACRP10323 421 aa19.09■□□□□ 0.65
HIF3A-211ENST00000528563 KRT40Q6A162 431 aa19.09■□□□□ 0.65
HIF3A-211ENST00000528563 ZNF365Q70YC5 407 aa19.09■□□□□ 0.65
HIF3A-211ENST00000528563 PLPPR4Q7Z2D5 763 aa19.09■□□□□ 0.65
HIF3A-211ENST00000528563 TNFRSF25Q93038 417 aa19.09■□□□□ 0.65
HIF3A-211ENST00000528563 ATP6V0A1Q93050 837 aa19.09■□□□□ 0.65
HIF3A-211ENST00000528563 NRCAMQ92823 1304 aa19.08■□□□□ 0.65
HIF3A-211ENST00000528563 TREHO43280 583 aa19.08■□□□□ 0.64
HIF3A-211ENST00000528563 CD2BP2O95400 341 aaKnown RBP19.08■□□□□ 0.64
HIF3A-211ENST00000528563 TDP2O95551 362 aa19.08■□□□□ 0.64
HIF3A-211ENST00000528563 MMP1P03956 469 aa19.08■□□□□ 0.64
HIF3A-211ENST00000528563 GNAT1P11488 350 aa19.08■□□□□ 0.64
HIF3A-211ENST00000528563 STAT5BP51692 787 aa19.08■□□□□ 0.64
HIF3A-211ENST00000528563 NR5A1Q13285 461 aa19.08■□□□□ 0.64
HIF3A-211ENST00000528563 EARS2Q5JPH6 523 aaKnown RBP19.08■□□□□ 0.64
HIF3A-211ENST00000528563 ZNF746Q6NUN9 644 aaPredicted RBP19.08■□□□□ 0.64
HIF3A-211ENST00000528563 RPUSD2Q8IZ73 545 aaKnown RBP19.08■□□□□ 0.64
HIF3A-211ENST00000528563 CCDC155Q8N6L0 562 aa19.08■□□□□ 0.64
HIF3A-211ENST00000528563 SLC5A5Q92911 643 aa19.08■□□□□ 0.64
HIF3A-211ENST00000528563 WNT8BQ93098 351 aa19.08■□□□□ 0.64
HIF3A-211ENST00000528563 RIT2Q99578 217 aa19.08■□□□□ 0.64
HIF3A-211ENST00000528563 AZI2Q9H6S1 392 aa19.08■□□□□ 0.64
HIF3A-211ENST00000528563 LAMA3Q16787 3333 aa19.08■□□□□ 0.64
HIF3A-211ENST00000528563 BTBD18B2RXH4 712 aa19.07■□□□□ 0.64
HIF3A-211ENST00000528563 CKBP12277 381 aa19.07■□□□□ 0.64
HIF3A-211ENST00000528563 KRT2P35908 639 aa19.07■□□□□ 0.64
HIF3A-211ENST00000528563 RASIP1Q5U651 963 aa19.07■□□□□ 0.64
HIF3A-211ENST00000528563 PIK3AP1Q6ZUJ8 805 aa19.07■□□□□ 0.64
HIF3A-211ENST00000528563 NEK8Q86SG6 692 aa19.07■□□□□ 0.64
HIF3A-211ENST00000528563 AFAP1L1Q8TED9 768 aa19.07■□□□□ 0.64
HIF3A-211ENST00000528563 LMBR1Q8WVP7 490 aa19.07■□□□□ 0.64
HIF3A-211ENST00000528563 FGBP02675 491 aa19.06■□□□□ 0.64
HIF3A-211ENST00000528563 SELPP16109 830 aa19.06■□□□□ 0.64
HIF3A-211ENST00000528563 MARK3P27448 753 aa19.06■□□□□ 0.64
HIF3A-211ENST00000528563 RFC2P35250 354 aa19.06■□□□□ 0.64
HIF3A-211ENST00000528563 HMGN5P82970 282 aaKnown RBP19.06■□□□□ 0.64
HIF3A-211ENST00000528563 KRT76Q01546 638 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms