RNA–Protein interactions for RNA: ENST00000528395.1

TMX2-CTNND1-201, Transcript of TMX2-CTNND1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMX2-CTNND1, Length 585 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1-201ENST00000528395 PKD2L1Q9P0L9 805 aa12.76□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 HDAC6Q9UBN7 1215 aa12.76□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 NOD1Q9Y239 953 aa12.76□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 LAMA2P24043 3122 aaKnown RBP12.76□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 LTBP2Q14767 1821 aa12.76□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 PITPNM1O00562 1244 aa12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 LGR5O75473 907 aa12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 MMP1P03956 469 aa12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 GNAT1P11488 350 aa12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 GCFC2P16383 781 aaKnown RBP12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 HOXC8P31273 242 aa12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 ACTR2P61160 394 aa12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 SP4Q02446 784 aa12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 FPGSQ05932 587 aa12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 PPIGQ13427 754 aaKnown RBP eCLIP12.75□□□□□ -0.373e-11■■□□□ 13.9
TMX2-CTNND1-201ENST00000528395 BFSP2Q13515 415 aa12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 UTP14CQ5TAP6 766 aaKnown RBP12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 KRT40Q6A162 431 aa12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 GDF6Q6KF10 455 aaPredicted RBP12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 EMSYQ7Z589 1322 aa12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 NEK8Q86SG6 692 aa12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 TDHQ8IZJ6 230 aa12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 CCDC155Q8N6L0 562 aa12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 CAGE1Q8TC20 777 aa12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 TMX3Q96JJ7 454 aa12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 RIT2Q99578 217 aa12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 AZI2Q9H6S1 392 aa12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 DOCK5Q9H7D0 1870 aa12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 GJB4Q9NTQ9 266 aa12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 ERAP1Q9NZ08 941 aa12.75□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 NRCAMQ92823 1304 aa12.74□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 IGKV6D-21A0A0A0MT36 114 aa12.74□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 DTNBO60941 627 aa12.74□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 SLC26A2P50443 739 aa12.74□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 KRT76Q01546 638 aa12.74□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 PTK7Q13308 1070 aa12.74□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 SAFBQ15424 915 aaKnown RBP eCLIP12.74□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 INF2Q27J81 1249 aa12.74□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 PPP4R3AQ6IN85 833 aa12.74□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 ZNF746Q6NUN9 644 aaPredicted RBP12.74□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 PLPPR4Q7Z2D5 763 aa12.74□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 SMAP1Q8IYB5 467 aaPredicted RBP12.74□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 FAM184AQ8NB25 1140 aa12.74□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 OXER1Q8TDS5 423 aa12.74□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 GLG1Q92896 1179 aa12.74□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 SLC5A5Q92911 643 aa12.74□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 TNFRSF25Q93038 417 aa12.74□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 CTAGE1Q96RT6 745 aa12.74□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 PPP1R12CQ9BZL4 782 aa12.74□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 TCEAL9Q9UHQ7 104 aa12.74□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 KIF3AQ9Y496 699 aa12.74□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 TELO2Q9Y4R8 837 aa12.74□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 C17orf102A2RUQ5 167 aa12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 MSH4O15457 936 aa12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 CCNE2O96020 404 aa12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 SMIM10L2AP0DMW4 78 aa12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 SMIM10L2BP0DMW5 78 aa12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 CYP2C9P11712 490 aa12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 CYP2C18P33260 490 aa12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 STAT5BP51692 787 aa12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 RBL2Q08999 1139 aa12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 MIS18BP1Q6P0N0 1132 aa12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 ABHD15Q6UXT9 468 aa12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 PIK3AP1Q6ZUJ8 805 aa12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 TRIM50Q86XT4 487 aa12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 DIS3L2Q8IYB7 885 aaKnown RBP12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 RPUSD2Q8IZ73 545 aaKnown RBP12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 RETREG2Q8NC44 543 aa12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 FBXO18Q8NFZ0 1043 aa12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 AFAP1L1Q8TED9 768 aa12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 PPP1R13LQ8WUF5 828 aa12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 C8orf76Q96K31 380 aa12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 PCYT2Q99447 389 aa12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 RNPEPQ9H4A4 650 aa12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 DDX25Q9UHL0 483 aaKnown RBP12.73□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 BTBD18B2RXH4 712 aa12.72□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 TBX3O15119 743 aa12.72□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 CD2BP2O95400 341 aaKnown RBP12.72□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 PARNO95453 639 aaKnown RBP12.72□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 TDP2O95551 362 aa12.72□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 PFKMP08237 780 aa12.72□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 RFC2P35250 354 aa12.72□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 NR5A1Q13285 461 aa12.72□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 LETM2Q2VYF4 491 aa12.72□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 LRIT3Q3SXY7 679 aa12.72□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 FAM160B1Q5W0V3 765 aa12.72□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 SERINC5Q86VE9 423 aa12.72□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 RDM1Q8NG50 284 aa12.72□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 ATP6V0A1Q93050 837 aa12.72□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 FAM20AQ96MK3 541 aa12.72□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 WNT8AQ9H1J5 351 aa12.72□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 IL23AQ9NPF7 189 aa12.72□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 PCDHA10Q9Y5I2 948 aa12.72□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 UMODL1Q5DID0 1318 aa12.71□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 RRN3P2A6NIE6 340 aa12.71□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 WDR64B1ANS9 1081 aa12.71□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 DDX39AO00148 427 aaKnown RBP12.71□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 GAS7O60861 476 aa12.71□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 CAND2O75155 1236 aa12.71□□□□□ -0.37
TMX2-CTNND1-201ENST00000528395 PSMD10O75832 226 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms