RNA–Protein interactions for RNA: ENST00000526639.2

SNRNP35-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP35, Length 1,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-203ENST00000526639 DEKP35659 375 aaKnown RBP12.69□□□□□ -0.38
SNRNP35-203ENST00000526639 NEK4P51957 841 aa12.69□□□□□ -0.38
SNRNP35-203ENST00000526639 GIMAP8Q8ND71 665 aaPredicted RBP12.69□□□□□ -0.38
SNRNP35-203ENST00000526639 SNX21Q969T3 373 aa12.69□□□□□ -0.38
SNRNP35-203ENST00000526639 VWCEQ96DN2 955 aa12.69□□□□□ -0.38
SNRNP35-203ENST00000526639 RNPEPQ9H4A4 650 aa12.69□□□□□ -0.38
SNRNP35-203ENST00000526639 CXXC1Q9P0U4 656 aaPredicted RBP12.69□□□□□ -0.38
SNRNP35-203ENST00000526639 TRIP12Q14669 1992 aaPredicted RBP12.68□□□□□ -0.38
SNRNP35-203ENST00000526639 FGBP02675 491 aa12.68□□□□□ -0.38
SNRNP35-203ENST00000526639 IQCF3P0C7M6 154 aa12.68□□□□□ -0.38
SNRNP35-203ENST00000526639 NLRP5P59047 1200 aa12.68□□□□□ -0.38
SNRNP35-203ENST00000526639 BECN1Q14457 450 aa12.68□□□□□ -0.38
SNRNP35-203ENST00000526639 RETREG2Q8NC44 543 aa12.68□□□□□ -0.38
SNRNP35-203ENST00000526639 CCDC148Q8NFR7 591 aa12.68□□□□□ -0.38
SNRNP35-203ENST00000526639 DHX38Q92620 1227 aaKnown RBP12.68□□□□□ -0.38
SNRNP35-203ENST00000526639 WNT8BQ93098 351 aa12.68□□□□□ -0.38
SNRNP35-203ENST00000526639 SCN5AQ14524 2016 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 GSTTP1A0A1W2PQM5 241 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 GRXCR1A8MXD5 290 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 MEIS1O00470 390 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 PITPNM1O00562 1244 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 DEXIO95424 95 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 SMIM10L2AP0DMW4 78 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 SMIM10L2BP0DMW5 78 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 MARK3P27448 753 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 PSRC1Q6PGN9 363 aaPredicted RBP12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 CPLX2Q6PUV4 134 aaKnown RBP12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 NECAB1Q8N987 351 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 SEPT1Q8WYJ6 367 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 JPH1Q9HDC5 661 aaPredicted RBP12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 SETD4Q9NVD3 440 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 DDX39AO00148 427 aaKnown RBP12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 CD2BP2O95400 341 aaKnown RBP12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 LARGE1O95461 756 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 ITGB3BPQ13352 177 aaPredicted RBP12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 BFSP2Q13515 415 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 ANKRD1Q15327 319 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 ME3Q16798 604 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 TEX2Q8IWB9 1127 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 RPUSD2Q8IZ73 545 aaKnown RBP12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 BICD2Q8TD16 824 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 CRYGNQ8WXF5 182 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 ATP6V0A1Q93050 837 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 AGO4Q9HCK5 861 aaKnown RBP12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 SH3GLB2Q9NR46 395 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 GJB4Q9NTQ9 266 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 SLC9A2Q9UBY0 812 aa12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 ZNF215Q9UL58 517 aaPredicted RBP12.67□□□□□ -0.38
SNRNP35-203ENST00000526639 C17orf102A2RUQ5 167 aa12.66□□□□□ -0.38
SNRNP35-203ENST00000526639 TREHO43280 583 aa12.66□□□□□ -0.38
SNRNP35-203ENST00000526639 PFKFB2O60825 505 aa12.66□□□□□ -0.38
SNRNP35-203ENST00000526639 CKBP12277 381 aa12.66□□□□□ -0.38
SNRNP35-203ENST00000526639 GPR153Q6NV75 609 aa12.66□□□□□ -0.38
SNRNP35-203ENST00000526639 PLA2G4DQ86XP0 818 aa12.66□□□□□ -0.38
SNRNP35-203ENST00000526639 HSCBQ8IWL3 235 aa12.66□□□□□ -0.38
SNRNP35-203ENST00000526639 CAGE1Q8TC20 777 aa12.66□□□□□ -0.38
SNRNP35-203ENST00000526639 GLG1Q92896 1179 aa12.66□□□□□ -0.38
SNRNP35-203ENST00000526639 SDF4Q9BRK5 362 aa12.66□□□□□ -0.38
SNRNP35-203ENST00000526639 KCNJ14Q9UNX9 436 aa12.66□□□□□ -0.38
SNRNP35-203ENST00000526639 IGLV3-22A0A075B6J6 115 aa12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 ZBBXA8MT70 800 aa12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 ST18O60284 1047 aa12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 CTDNEP1O95476 244 aa12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 SMAD3P84022 425 aaKnown RBP12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 NBR1Q14596 966 aa12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 RASIP1Q5U651 963 aa12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 HERVK_113Q902F9 699 aa12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 FTOQ9C0B1 505 aaKnown RBP eCLIP12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 CDKL5O76039 1030 aa12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 CYP3A4P08684 503 aa12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 PBX2P40425 430 aa12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 ACTR2P61160 394 aa12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 PTK7Q13308 1070 aa12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 GPNMBQ14956 572 aa12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 PRR16Q569H4 304 aa12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 ZNF618Q5T7W0 954 aa12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 LRRC8DQ7L1W4 858 aa12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 CCDC155Q8N6L0 562 aa12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 IL27Q8NEV9 243 aa12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 AFAP1L1Q8TED9 768 aa12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 PCYT2Q99447 389 aa12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 ERAP1Q9NZ08 941 aa12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 PCDHA4Q9UN74 947 aa12.65□□□□□ -0.38
SNRNP35-203ENST00000526639 TET1Q8NFU7 2136 aa12.64□□□□□ -0.39
SNRNP35-203ENST00000526639 IPO5O00410 1097 aaKnown RBP12.64□□□□□ -0.39
SNRNP35-203ENST00000526639 EDIL3O43854 480 aa12.64□□□□□ -0.39
SNRNP35-203ENST00000526639 SELPP16109 830 aa12.64□□□□□ -0.39
SNRNP35-203ENST00000526639 HOXC8P31273 242 aa12.64□□□□□ -0.39
SNRNP35-203ENST00000526639 THPOP40225 353 aa12.64□□□□□ -0.39
SNRNP35-203ENST00000526639 NPY5RQ15761 445 aa12.64□□□□□ -0.39
SNRNP35-203ENST00000526639 ZNF697Q5TEC3 545 aa12.64□□□□□ -0.39
SNRNP35-203ENST00000526639 MCTP2Q6DN12 878 aa12.64□□□□□ -0.39
SNRNP35-203ENST00000526639 SERINC5Q86VE9 423 aa12.64□□□□□ -0.39
SNRNP35-203ENST00000526639 BLIDQ8IZY5 108 aa12.64□□□□□ -0.39
SNRNP35-203ENST00000526639 TBCKQ8TEA7 893 aa12.64□□□□□ -0.39
SNRNP35-203ENST00000526639 LMBR1Q8WVP7 490 aa12.64□□□□□ -0.39
SNRNP35-203ENST00000526639 ZNF577Q9BSK1 485 aa12.64□□□□□ -0.39
SNRNP35-203ENST00000526639 MTMR10Q9NXD2 777 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms