RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 HOXC8P31273 242 aa13.96□□□□□ -0.17
CHKA-203ENST00000525155 ZNF618Q5T7W0 954 aa13.96□□□□□ -0.17
CHKA-203ENST00000525155 LRRC8DQ7L1W4 858 aa13.96□□□□□ -0.17
CHKA-203ENST00000525155 HEATR3Q7Z4Q2 680 aa13.96□□□□□ -0.17
CHKA-203ENST00000525155 CAGE1Q8TC20 777 aa13.96□□□□□ -0.17
CHKA-203ENST00000525155 AFAP1L1Q8TED9 768 aa13.96□□□□□ -0.17
CHKA-203ENST00000525155 CUL5Q93034 780 aa13.96□□□□□ -0.17
CHKA-203ENST00000525155 SPATA33Q96N06 139 aa13.96□□□□□ -0.17
CHKA-203ENST00000525155 BARHL2Q9NY43 387 aa13.96□□□□□ -0.17
CHKA-203ENST00000525155 RTEL1Q9NZ71 1219 aa13.96□□□□□ -0.17
CHKA-203ENST00000525155 PRRC2BQ5JSZ5 2229 aaKnown RBP13.95□□□□□ -0.18
CHKA-203ENST00000525155 FRMPD4Q14CM0 1322 aa13.95□□□□□ -0.18
CHKA-203ENST00000525155 STK36Q9NRP7 1315 aa13.95□□□□□ -0.18
CHKA-203ENST00000525155 SPATA31C2B4DYI2 1134 aa13.95□□□□□ -0.18
CHKA-203ENST00000525155 MEIS2O14770 477 aa13.95□□□□□ -0.18
CHKA-203ENST00000525155 TGFB3P10600 412 aa13.95□□□□□ -0.18
CHKA-203ENST00000525155 WDR5P61964 334 aaKnown RBP13.95□□□□□ -0.18
CHKA-203ENST00000525155 TFF2Q03403 129 aa13.95□□□□□ -0.18
CHKA-203ENST00000525155 MCTP2Q6DN12 878 aa13.95□□□□□ -0.18
CHKA-203ENST00000525155 USP17L6PQ6QN14 398 aa13.95□□□□□ -0.18
CHKA-203ENST00000525155 C7orf31Q8N865 590 aa13.95□□□□□ -0.18
CHKA-203ENST00000525155 CCDC148Q8NFR7 591 aa13.95□□□□□ -0.18
CHKA-203ENST00000525155 ATXN2LQ8WWM7 1075 aaKnown RBP13.95□□□□□ -0.18
CHKA-203ENST00000525155 PHKBQ93100 1093 aa13.95□□□□□ -0.18
CHKA-203ENST00000525155 INPP4AQ96PE3 977 aaPredicted RBP13.95□□□□□ -0.18
CHKA-203ENST00000525155 SLC9A7Q96T83 725 aa13.95□□□□□ -0.18
CHKA-203ENST00000525155 PSTPIP2Q9H939 334 aa13.95□□□□□ -0.18
CHKA-203ENST00000525155 SH3GLB2Q9NR46 395 aa13.95□□□□□ -0.18
CHKA-203ENST00000525155 NOD1Q9Y239 953 aa13.95□□□□□ -0.18
CHKA-203ENST00000525155 ACTN1P12814 892 aa13.94□□□□□ -0.18
CHKA-203ENST00000525155 BMP1P13497 986 aa13.94□□□□□ -0.18
CHKA-203ENST00000525155 GNA11P29992 359 aa13.94□□□□□ -0.18
CHKA-203ENST00000525155 ICAM3P32942 547 aa13.94□□□□□ -0.18
CHKA-203ENST00000525155 NAPAP54920 295 aa13.94□□□□□ -0.18
CHKA-203ENST00000525155 HMGN5P82970 282 aaKnown RBP13.94□□□□□ -0.18
CHKA-203ENST00000525155 PTK7Q13308 1070 aa13.94□□□□□ -0.18
CHKA-203ENST00000525155 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.94□□□□□ -0.187e-6■□□□□ 11
CHKA-203ENST00000525155 BICD2Q8TD16 824 aa13.94□□□□□ -0.18
CHKA-203ENST00000525155 NECAB3Q96P71 396 aaPredicted RBP13.94□□□□□ -0.18
CHKA-203ENST00000525155 RNPEPQ9H4A4 650 aa13.94□□□□□ -0.18
CHKA-203ENST00000525155 KIF3AQ9Y496 699 aa13.94□□□□□ -0.18
CHKA-203ENST00000525155 BDP1A6H8Y1 2624 aa13.94□□□□□ -0.18
CHKA-203ENST00000525155 hCG_1642624A0A1W2PR95 340 aa13.93□□□□□ -0.18
CHKA-203ENST00000525155 ESYT2A0FGR8 921 aa13.93□□□□□ -0.18
CHKA-203ENST00000525155 PIK3CDO00329 1044 aa13.93□□□□□ -0.18
CHKA-203ENST00000525155 TREHO43280 583 aa13.93□□□□□ -0.18
CHKA-203ENST00000525155 BAIAP3O94812 1187 aa13.93□□□□□ -0.18
CHKA-203ENST00000525155 CCND2P30279 289 aa13.93□□□□□ -0.18
CHKA-203ENST00000525155 GRB10Q13322 594 aa13.93□□□□□ -0.18
CHKA-203ENST00000525155 WWC2Q6AWC2 1192 aa13.93□□□□□ -0.18
CHKA-203ENST00000525155 GALNT17Q6IS24 598 aa13.93□□□□□ -0.18
CHKA-203ENST00000525155 KCNV1Q6PIU1 500 aa13.93□□□□□ -0.18
CHKA-203ENST00000525155 SERINC5Q86VE9 423 aa13.93□□□□□ -0.18
CHKA-203ENST00000525155 NECAB1Q8N987 351 aa13.93□□□□□ -0.18
CHKA-203ENST00000525155 ARNTL2Q8WYA1 636 aa13.93□□□□□ -0.18
CHKA-203ENST00000525155 SYMPKQ92797 1274 aaKnown RBP13.93□□□□□ -0.18
CHKA-203ENST00000525155 EHMT1Q9H9B1 1298 aa13.93□□□□□ -0.18
CHKA-203ENST00000525155 C6orf50Q9HD87 102 aa13.93□□□□□ -0.18
CHKA-203ENST00000525155 THEGQ9P2T0 379 aa13.93□□□□□ -0.18
CHKA-203ENST00000525155 NCOR1O75376 2440 aa13.92□□□□□ -0.18
CHKA-203ENST00000525155 H3BRB1 525 aa13.92□□□□□ -0.18
CHKA-203ENST00000525155 STXBP3O00186 592 aa13.92□□□□□ -0.18
CHKA-203ENST00000525155 ATP9AO75110 1047 aa13.92□□□□□ -0.18
CHKA-203ENST00000525155 ADCY7P51828 1080 aa13.92□□□□□ -0.18
CHKA-203ENST00000525155 ADAM17P78536 824 aa13.92□□□□□ -0.18
CHKA-203ENST00000525155 MRPS5P82675 430 aaKnown RBP13.92□□□□□ -0.18
CHKA-203ENST00000525155 PKN1Q16512 942 aa13.92□□□□□ -0.18
CHKA-203ENST00000525155 CNKSR3Q6P9H4 555 aa13.92□□□□□ -0.18
CHKA-203ENST00000525155 CYFIP1Q7L576 1253 aa13.92□□□□□ -0.18
CHKA-203ENST00000525155 TRIM50Q86XT4 487 aa13.92□□□□□ -0.18
CHKA-203ENST00000525155 CCDC83Q8IWF9 413 aa13.92□□□□□ -0.18
CHKA-203ENST00000525155 DBF4BQ8NFT6 615 aa13.92□□□□□ -0.18
CHKA-203ENST00000525155 SMARCC2Q8TAQ2 1214 aa13.92□□□□□ -0.18
CHKA-203ENST00000525155 SNX21Q969T3 373 aa13.92□□□□□ -0.18
CHKA-203ENST00000525155 TMX3Q96JJ7 454 aa13.92□□□□□ -0.18
CHKA-203ENST00000525155 GPR20Q99678 358 aa13.92□□□□□ -0.18
CHKA-203ENST00000525155 TUT1Q9H6E5 874 aaKnown RBP13.92□□□□□ -0.18
CHKA-203ENST00000525155 MLXIPQ9HAP2 919 aa13.92□□□□□ -0.18
CHKA-203ENST00000525155 RIC8AQ9NPQ8 531 aa13.92□□□□□ -0.18
CHKA-203ENST00000525155 ORC3Q9UBD5 711 aaPredicted RBP13.92□□□□□ -0.18
CHKA-203ENST00000525155 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.92□□□□□ -0.18
CHKA-203ENST00000525155 ABHD14A-ACY1A0A1B0GW23 586 aa13.91□□□□□ -0.18
CHKA-203ENST00000525155 SMCO2A6NFE2 343 aa13.91□□□□□ -0.18
CHKA-203ENST00000525155 TLL1O43897 1013 aa13.91□□□□□ -0.18
CHKA-203ENST00000525155 GJB5O95377 273 aa13.91□□□□□ -0.18
CHKA-203ENST00000525155 LARGE1O95461 756 aa13.91□□□□□ -0.18
CHKA-203ENST00000525155 FOSP01100 380 aaPredicted RBP13.91□□□□□ -0.18
CHKA-203ENST00000525155 LGALS2P05162 132 aa13.91□□□□□ -0.18
CHKA-203ENST00000525155 SMIM10L2AP0DMW4 78 aa13.91□□□□□ -0.18
CHKA-203ENST00000525155 SMIM10L2BP0DMW5 78 aa13.91□□□□□ -0.18
CHKA-203ENST00000525155 MICALL1Q8N3F8 863 aa13.91□□□□□ -0.18
CHKA-203ENST00000525155 NSUN7Q8NE18 718 aaKnown RBP13.91□□□□□ -0.18
CHKA-203ENST00000525155 KATNAL1Q9BW62 490 aa13.91□□□□□ -0.18
CHKA-203ENST00000525155 ZMYND12Q9H0C1 365 aa13.91□□□□□ -0.18
CHKA-203ENST00000525155 SUGCTQ9HAC7 445 aa13.91□□□□□ -0.18
CHKA-203ENST00000525155 SETD4Q9NVD3 440 aa13.91□□□□□ -0.18
CHKA-203ENST00000525155 TRIP12Q14669 1992 aaPredicted RBP13.91□□□□□ -0.18
CHKA-203ENST00000525155 SPDYE3A6NKU9 549 aa13.9□□□□□ -0.18
CHKA-203ENST00000525155 TNFRSF10AO00220 468 aa13.9□□□□□ -0.18
CHKA-203ENST00000525155 LGR5O75473 907 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms