RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 SLC27A2O14975 620 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 NKRFO15226 690 aaKnown RBP eCLIP2.87□□□□□ -1.95
CD44-212ENST00000524922 FGFR1P11362 822 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 FAHP16930 419 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 TACR2P21452 398 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 CSF2RBP32927 897 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 KCNJ6P48051 423 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 SURF1Q15526 300 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 YOD1Q5VVQ6 348 aaPredicted RBP2.87□□□□□ -1.95
CD44-212ENST00000524922 PRAMEF18Q5VWM3 479 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 CYB5RLQ6IPT4 315 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 KCNT2Q6UVM3 1135 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 GLB1LQ6UWU2 654 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 LBX2Q6XYB7 198 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 EEPD1Q7L9B9 569 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 FAM124AQ86V42 546 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 Q8TCH9 128 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 SH3RF2Q8TEC5 729 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 SH3RF3Q8TEJ3 882 aaPredicted RBP2.87□□□□□ -1.95
CD44-212ENST00000524922 HNRNPLLQ8WVV9 542 aaKnown RBP2.87□□□□□ -1.95
CD44-212ENST00000524922 KCTD13Q8WZ19 329 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 AJUBAQ96IF1 538 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 CLIC6Q96NY7 704 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 SORCS2Q96PQ0 1159 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 PHF20Q9BVI0 1012 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 L2HGDHQ9H9P8 463 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 CAPN10Q9HC96 672 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 IGSF5Q9NSI5 407 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 SYNJ2O15056 1496 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 TOPBP1Q92547 1522 aa2.87□□□□□ -1.95
CD44-212ENST00000524922 TARBP1Q13395 1621 aaKnown RBP2.86□□□□□ -1.95
CD44-212ENST00000524922 PRDM2Q13029 1718 aa2.86□□□□□ -1.95
CD44-212ENST00000524922 WNT9AO14904 365 aa2.86□□□□□ -1.95
CD44-212ENST00000524922 FOXS1O43638 330 aa2.86□□□□□ -1.95
CD44-212ENST00000524922 ADCY3O60266 1144 aa2.86□□□□□ -1.95
CD44-212ENST00000524922 CYP1A1P04798 512 aaPredicted RBP2.86□□□□□ -1.95
CD44-212ENST00000524922 CHGBP05060 677 aa2.86□□□□□ -1.95
CD44-212ENST00000524922 SSBP05455 408 aaKnown RBP eCLIP2.86□□□□□ -1.95
CD44-212ENST00000524922 CKMP06732 381 aa2.86□□□□□ -1.95
CD44-212ENST00000524922 C6P13671 934 aa2.86□□□□□ -1.95
CD44-212ENST00000524922 ERCC5P28715 1186 aaPredicted RBP2.86□□□□□ -1.95
CD44-212ENST00000524922 GRIN1Q05586 938 aa2.86□□□□□ -1.95
CD44-212ENST00000524922 DUSP8Q13202 625 aa2.86□□□□□ -1.95
CD44-212ENST00000524922 TUSC3Q13454 348 aa2.86□□□□□ -1.95
CD44-212ENST00000524922 DDR2Q16832 855 aa2.86□□□□□ -1.95
CD44-212ENST00000524922 CD276Q5ZPR3 534 aa2.86□□□□□ -1.95
CD44-212ENST00000524922 SLFN13Q68D06 897 aa2.86□□□□□ -1.95
CD44-212ENST00000524922 STYK1Q6J9G0 422 aa2.86□□□□□ -1.95
CD44-212ENST00000524922 Q6ZUG5 572 aa2.86□□□□□ -1.95
CD44-212ENST00000524922 CIR1Q86X95 450 aaPredicted RBP2.86□□□□□ -1.95
CD44-212ENST00000524922 SGSM3Q96HU1 749 aa2.86□□□□□ -1.95
CD44-212ENST00000524922 DLL4Q9NR61 685 aa2.86□□□□□ -1.95
CD44-212ENST00000524922 LRP2BPQ9P2M1 347 aa2.86□□□□□ -1.95
CD44-212ENST00000524922 CROTQ9UKG9 612 aa2.86□□□□□ -1.95
CD44-212ENST00000524922 TESMINQ9Y4I5 508 aa2.86□□□□□ -1.95
CD44-212ENST00000524922 SLC4A7Q9Y6M7 1214 aa2.86□□□□□ -1.95
CD44-212ENST00000524922 TOP2AP11388 1531 aaKnown RBP2.86□□□□□ -1.95
CD44-212ENST00000524922 ZNF608Q9ULD9 1512 aaPredicted RBP2.86□□□□□ -1.95
CD44-212ENST00000524922 ZNF536O15090 1300 aa2.86□□□□□ -1.95
CD44-212ENST00000524922 GAPVD1Q14C86 1478 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 ABCC10Q5T3U5 1492 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 BLACEA4D250 179 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 ZNF839A8K0R7 811 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 MATN2O00339 956 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 PLSCR1O15162 318 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 B4GALT4O60513 344 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 PABPC1P11940 636 aaKnown RBP2.85□□□□□ -1.95
CD44-212ENST00000524922 COL6A2P12110 1019 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 TCF3P15923 654 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 GRK2P25098 689 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 GRK3P35626 688 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 PFKPQ01813 784 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 SMAD2Q15796 467 aaKnown RBP2.85□□□□□ -1.95
CD44-212ENST00000524922 SKIDA1Q1XH10 827 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 PAN2Q504Q3 1202 aaKnown RBP2.85□□□□□ -1.95
CD44-212ENST00000524922 IGFL4Q6B9Z1 124 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 TCTN3Q6NUS6 607 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 TRMT10BQ6PF06 316 aaKnown RBP2.85□□□□□ -1.95
CD44-212ENST00000524922 PLEKHH3Q7Z736 793 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 TRIM48Q8IWZ4 208 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 SLC43A3Q8NBI5 491 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 DCAF4Q8WV16 495 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 WRNIP1Q96S55 665 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.85□□□□□ -1.95
CD44-212ENST00000524922 YIPF4Q9BSR8 244 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 SEC61A2Q9H9S3 476 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 ST7Q9NRC1 585 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 ZFP69BQ9UJL9 534 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 PTPN22Q9Y2R2 807 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 MSRB2Q9Y3D2 182 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 NUP160Q12769 1436 aa2.85□□□□□ -1.95
CD44-212ENST00000524922 GRIN2BQ13224 1484 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 NPEPPSL1A6NEC2 478 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 KRIT1O00522 736 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 ZNF623O75123 536 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 CYP7B1O75881 506 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 FSHBP01225 129 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 C6orf222P0C671 652 aaPredicted RBP2.84□□□□□ -1.95
CD44-212ENST00000524922 ZNF888P0CJ79 500 aaPredicted RBP2.84□□□□□ -1.95
CD44-212ENST00000524922 SELENOPP49908 381 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms