RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 RTN1Q16799 776 aa7.5□□□□□ -1.21
NUP98-213ENST00000524563 PTPROQ16827 1216 aa7.5□□□□□ -1.21
NUP98-213ENST00000524563 CSPP1Q1MSJ5 1256 aa7.5□□□□□ -1.21
NUP98-213ENST00000524563 GNPTABQ3T906 1256 aa7.5□□□□□ -1.21
NUP98-213ENST00000524563 TIGD5Q53EQ6 642 aa7.5□□□□□ -1.21
NUP98-213ENST00000524563 SYNE3Q6ZMZ3 975 aa7.5□□□□□ -1.21
NUP98-213ENST00000524563 SESTD1Q86VW0 696 aa7.5□□□□□ -1.21
NUP98-213ENST00000524563 FCHSD1Q86WN1 690 aa7.5□□□□□ -1.21
NUP98-213ENST00000524563 CCDC82Q8N4S0 544 aa7.5□□□□□ -1.21
NUP98-213ENST00000524563 PPTC7Q8NI37 304 aa7.5□□□□□ -1.21
NUP98-213ENST00000524563 UIMC1Q96RL1 719 aa7.5□□□□□ -1.21
NUP98-213ENST00000524563 MLXIPQ9HAP2 919 aa7.5□□□□□ -1.21
NUP98-213ENST00000524563 RBM28Q9NW13 759 aaKnown RBP7.5□□□□□ -1.21
NUP98-213ENST00000524563 COL20A1Q9P218 1284 aa7.5□□□□□ -1.21
NUP98-213ENST00000524563 NAP1L2Q9ULW6 460 aaPredicted RBP7.5□□□□□ -1.21
NUP98-213ENST00000524563 PCDHA1Q9Y5I3 950 aa7.5□□□□□ -1.21
NUP98-213ENST00000524563 TTC3P53804 2025 aa7.5□□□□□ -1.21
NUP98-213ENST00000524563 LGR5O75473 907 aa7.49□□□□□ -1.21
NUP98-213ENST00000524563 UPP2O95045 317 aa7.49□□□□□ -1.21
NUP98-213ENST00000524563 GJB5O95377 273 aa7.49□□□□□ -1.21
NUP98-213ENST00000524563 NR3C2P08235 984 aa7.49□□□□□ -1.21
NUP98-213ENST00000524563 UBA1P22314 1058 aaKnown RBP7.49□□□□□ -1.21
NUP98-213ENST00000524563 ADD1P35611 737 aaKnown RBP7.49□□□□□ -1.21
NUP98-213ENST00000524563 GNAQP50148 359 aa7.49□□□□□ -1.21
NUP98-213ENST00000524563 EVCP57679 992 aa7.49□□□□□ -1.21
NUP98-213ENST00000524563 GHRHRQ02643 423 aa7.49□□□□□ -1.21
NUP98-213ENST00000524563 RABEP1Q15276 862 aa7.49□□□□□ -1.21
NUP98-213ENST00000524563 ZNF618Q5T7W0 954 aa7.49□□□□□ -1.21
NUP98-213ENST00000524563 CCDC62Q6P9F0 684 aa7.49□□□□□ -1.21
NUP98-213ENST00000524563 KCNV1Q6PIU1 500 aa7.49□□□□□ -1.21
NUP98-213ENST00000524563 SPRED2Q7Z698 418 aa7.49□□□□□ -1.21
NUP98-213ENST00000524563 RGS22Q8NE09 1264 aa7.49□□□□□ -1.21
NUP98-213ENST00000524563 SEPT8Q92599 483 aa7.49□□□□□ -1.21
NUP98-213ENST00000524563 DHX38Q92620 1227 aaKnown RBP7.49□□□□□ -1.21
NUP98-213ENST00000524563 CUL5Q93034 780 aa7.49□□□□□ -1.21
NUP98-213ENST00000524563 ATP6V0A1Q93050 837 aa7.49□□□□□ -1.21
NUP98-213ENST00000524563 SNX21Q969T3 373 aa7.49□□□□□ -1.21
NUP98-213ENST00000524563 RRP36Q96EU6 259 aaKnown RBP7.49□□□□□ -1.21
NUP98-213ENST00000524563 RAD9AQ99638 391 aa7.49□□□□□ -1.21
NUP98-213ENST00000524563 LZTS2Q9BRK4 669 aa7.49□□□□□ -1.21
NUP98-213ENST00000524563 LARP6Q9BRS8 491 aaKnown RBP7.49□□□□□ -1.21
NUP98-213ENST00000524563 UBE2ZQ9H832 354 aaPredicted RBP7.49□□□□□ -1.21
NUP98-213ENST00000524563 SEC63Q9UGP8 760 aaKnown RBP7.49□□□□□ -1.21
NUP98-213ENST00000524563 ZNF215Q9UL58 517 aaPredicted RBP7.49□□□□□ -1.21
NUP98-213ENST00000524563 COL4A6Q14031 1691 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 ZNF318Q5VUA4 2279 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 LINC01553A4QN01 128 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 RSPH10B2B2RC85 870 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 GCOM1H8Y6P7 765 aaPredicted RBP7.48□□□□□ -1.21
NUP98-213ENST00000524563 ST18O60284 1047 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 NBNO60934 754 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 PPFIA3O75145 1194 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 EIF3JO75822 258 aaKnown RBP7.48□□□□□ -1.21
NUP98-213ENST00000524563 RSPH10BP0C881 870 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 POLR2MP0CAP2 368 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 BMP1P13497 986 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 IBSPP21815 317 aaPredicted RBP7.48□□□□□ -1.21
NUP98-213ENST00000524563 PDIA3P30101 505 aaKnown RBP7.48□□□□□ -1.21
NUP98-213ENST00000524563 CTNNB1P35222 781 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 HSD17B4P51659 736 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 AK2P54819 239 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 CCT2P78371 535 aaKnown RBP7.48□□□□□ -1.21
NUP98-213ENST00000524563 RBL2Q08999 1139 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 PGM5Q15124 567 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 NTRK3Q16288 839 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 UTP14CQ5TAP6 766 aaKnown RBP7.48□□□□□ -1.21
NUP98-213ENST00000524563 WWC2Q6AWC2 1192 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 TYW1BQ6NUM6 668 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 SPRYD3Q8NCJ5 442 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 SMARCC2Q8TAQ2 1214 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 KAT2BQ92831 832 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 GPKOWQ92917 476 aaPredicted RBP eCLIP7.48□□□□□ -1.21
NUP98-213ENST00000524563 PHKBQ93100 1093 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 KIF2CQ99661 725 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 PDCD2LQ9BRP1 358 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 IFIH1Q9BYX4 1025 aaKnown RBP7.48□□□□□ -1.21
NUP98-213ENST00000524563 MAF1Q9H063 256 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 NCOA5Q9HCD5 579 aaKnown RBP7.48□□□□□ -1.21
NUP98-213ENST00000524563 PDRG1Q9NUG6 133 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 DDX41Q9UJV9 622 aaKnown RBP7.48□□□□□ -1.21
NUP98-213ENST00000524563 FAM50BQ9Y247 325 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 INSL6Q9Y581 213 aa7.48□□□□□ -1.21
NUP98-213ENST00000524563 K7ELQ4 463 aaPredicted RBP7.47□□□□□ -1.21
NUP98-213ENST00000524563 LARGE1O95461 756 aa7.47□□□□□ -1.21
NUP98-213ENST00000524563 CXCL10P02778 98 aa7.47□□□□□ -1.21
NUP98-213ENST00000524563 LGALS2P05162 132 aa7.47□□□□□ -1.21
NUP98-213ENST00000524563 SMIM10L2AP0DMW4 78 aa7.47□□□□□ -1.21
NUP98-213ENST00000524563 SMIM10L2BP0DMW5 78 aa7.47□□□□□ -1.21
NUP98-213ENST00000524563 GNAT1P11488 350 aa7.47□□□□□ -1.21
NUP98-213ENST00000524563 ERVK-21P61565 698 aa7.47□□□□□ -1.21
NUP98-213ENST00000524563 ARHGAP4P98171 946 aa7.47□□□□□ -1.21
NUP98-213ENST00000524563 ZNF200P98182 395 aaPredicted RBP7.47□□□□□ -1.21
NUP98-213ENST00000524563 STK3Q13188 491 aa7.47□□□□□ -1.21
NUP98-213ENST00000524563 CELF3Q5SZQ8 465 aaKnown RBP7.47□□□□□ -1.21
NUP98-213ENST00000524563 PTCRAQ6ISU1 281 aaPredicted RBP7.47□□□□□ -1.21
NUP98-213ENST00000524563 HEATR3Q7Z4Q2 680 aa7.47□□□□□ -1.21
NUP98-213ENST00000524563 DBF4BQ8NFT6 615 aa7.47□□□□□ -1.21
NUP98-213ENST00000524563 IL31RAQ8NI17 732 aa7.47□□□□□ -1.21
NUP98-213ENST00000524563 EMID1Q96A84 441 aaPredicted RBP7.47□□□□□ -1.21
NUP98-213ENST00000524563 VWCEQ96DN2 955 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms