RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 PLEKHA8P1O95397 391 aa13.58□□□□□ -0.24
SPARC-206ENST00000524277 FOSP01100 380 aaPredicted RBP13.58□□□□□ -0.24
SPARC-206ENST00000524277 KCNA2P16389 499 aa13.58□□□□□ -0.24
SPARC-206ENST00000524277 TCF7P36402 384 aaPredicted RBP13.58□□□□□ -0.24
SPARC-206ENST00000524277 ARHGAP4P98171 946 aa13.58□□□□□ -0.24
SPARC-206ENST00000524277 TFF2Q03403 129 aa13.58□□□□□ -0.24
SPARC-206ENST00000524277 MTMR1Q13613 665 aa13.58□□□□□ -0.24
SPARC-206ENST00000524277 PTPROQ16827 1216 aa13.58□□□□□ -0.24
SPARC-206ENST00000524277 BMP2KLQ5H9B9 411 aa13.58□□□□□ -0.24
SPARC-206ENST00000524277 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.58□□□□□ -0.24
SPARC-206ENST00000524277 TMTC3Q6ZXV5 915 aa13.58□□□□□ -0.24
SPARC-206ENST00000524277 TMCO2Q7Z6W1 182 aaPredicted RBP13.58□□□□□ -0.24
SPARC-206ENST00000524277 ZNF713Q8N859 430 aaPredicted RBP13.58□□□□□ -0.24
SPARC-206ENST00000524277 FBXO22Q8NEZ5 403 aa13.58□□□□□ -0.24
SPARC-206ENST00000524277 C1QTNF1Q9BXJ1 281 aa13.58□□□□□ -0.24
SPARC-206ENST00000524277 ANO2Q9NQ90 1003 aa13.58□□□□□ -0.24
SPARC-206ENST00000524277 JADE2Q9NQC1 790 aa13.58□□□□□ -0.24
SPARC-206ENST00000524277 UBIAD1Q9Y5Z9 338 aa13.58□□□□□ -0.24
SPARC-206ENST00000524277 RRN3P2A6NIE6 340 aa13.57□□□□□ -0.24
SPARC-206ENST00000524277 ITGB5P18084 799 aa13.57□□□□□ -0.24
SPARC-206ENST00000524277 PPFIA1Q13136 1202 aa13.57□□□□□ -0.24
SPARC-206ENST00000524277 TSGA10IPQ3SY00 556 aa13.57□□□□□ -0.24
SPARC-206ENST00000524277 KRT40Q6A162 431 aa13.57□□□□□ -0.24
SPARC-206ENST00000524277 PPP1R18Q6NYC8 613 aa13.57□□□□□ -0.24
SPARC-206ENST00000524277 FAM117BQ6P1L5 589 aa13.57□□□□□ -0.24
SPARC-206ENST00000524277 GDPD5Q8WTR4 605 aa13.57□□□□□ -0.24
SPARC-206ENST00000524277 LMBR1Q8WVP7 490 aa13.57□□□□□ -0.24
SPARC-206ENST00000524277 NEK1Q96PY6 1258 aa13.57□□□□□ -0.24
SPARC-206ENST00000524277 YME1L1Q96TA2 773 aa13.57□□□□□ -0.24
SPARC-206ENST00000524277 IFIH1Q9BYX4 1025 aaKnown RBP13.57□□□□□ -0.24
SPARC-206ENST00000524277 PCDHA6Q9UN73 950 aa13.57□□□□□ -0.24
SPARC-206ENST00000524277 PCDHA8Q9Y5H6 950 aa13.57□□□□□ -0.24
SPARC-206ENST00000524277 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.56□□□□□ -0.24
SPARC-206ENST00000524277 GSTTP1A0A1W2PQM5 241 aa13.56□□□□□ -0.24
SPARC-206ENST00000524277 MBLAC1A4D2B0 266 aaPredicted RBP13.56□□□□□ -0.24
SPARC-206ENST00000524277 ATP9AO75110 1047 aa13.56□□□□□ -0.24
SPARC-206ENST00000524277 HMGB1P09429 215 aaKnown RBP13.56□□□□□ -0.24
SPARC-206ENST00000524277 CTSHP09668 335 aa13.56□□□□□ -0.24
SPARC-206ENST00000524277 KCNQ1P51787 676 aa13.56□□□□□ -0.24
SPARC-206ENST00000524277 RCAN1P53805 252 aa13.56□□□□□ -0.24
SPARC-206ENST00000524277 IRX6P78412 446 aaPredicted RBP13.56□□□□□ -0.24
SPARC-206ENST00000524277 SP4Q02446 784 aa13.56□□□□□ -0.24
SPARC-206ENST00000524277 KRT32Q14532 448 aa13.56□□□□□ -0.24
SPARC-206ENST00000524277 PUS10Q3MIT2 529 aaKnown RBP13.56□□□□□ -0.24
SPARC-206ENST00000524277 HEATR3Q7Z4Q2 680 aa13.56□□□□□ -0.24
SPARC-206ENST00000524277 TRIM50Q86XT4 487 aa13.56□□□□□ -0.24
SPARC-206ENST00000524277 GLG1Q92896 1179 aa13.56□□□□□ -0.24
SPARC-206ENST00000524277 MRPL38Q96DV4 380 aaKnown RBP13.56□□□□□ -0.24
SPARC-206ENST00000524277 AZI2Q9H6S1 392 aa13.56□□□□□ -0.24
SPARC-206ENST00000524277 MTUS1Q9ULD2 1270 aa13.56□□□□□ -0.24
SPARC-206ENST00000524277 RWDD3Q9Y3V2 267 aa13.56□□□□□ -0.24
SPARC-206ENST00000524277 SQORQ9Y6N5 450 aa13.56□□□□□ -0.24
SPARC-206ENST00000524277 XIRP2A4UGR9 3374 aa13.55□□□□□ -0.24
SPARC-206ENST00000524277 PTPRSQ13332 1948 aa13.55□□□□□ -0.24
SPARC-206ENST00000524277 H3BNC9 293 aa13.55□□□□□ -0.24
SPARC-206ENST00000524277 RB1P06400 928 aa13.55□□□□□ -0.24
SPARC-206ENST00000524277 RXRAP19793 462 aa13.55□□□□□ -0.24
SPARC-206ENST00000524277 GRIK4Q16099 956 aa13.55□□□□□ -0.24
SPARC-206ENST00000524277 EPC2Q52LR7 807 aa13.55□□□□□ -0.24
SPARC-206ENST00000524277 TIGD5Q53EQ6 642 aa13.55□□□□□ -0.24
SPARC-206ENST00000524277 IER5Q5VY09 327 aa13.55□□□□□ -0.24
SPARC-206ENST00000524277 DHX32Q7L7V1 743 aaKnown RBP13.55□□□□□ -0.24
SPARC-206ENST00000524277 SPRED2Q7Z698 418 aa13.55□□□□□ -0.24
SPARC-206ENST00000524277 MICU3Q86XE3 530 aa13.55□□□□□ -0.24
SPARC-206ENST00000524277 CMTR1Q8N1G2 835 aaKnown RBP13.55□□□□□ -0.24
SPARC-206ENST00000524277 CCDC82Q8N4S0 544 aa13.55□□□□□ -0.24
SPARC-206ENST00000524277 IL17RAQ96F46 866 aa13.55□□□□□ -0.24
SPARC-206ENST00000524277 MXRA8Q9BRK3 442 aa13.55□□□□□ -0.24
SPARC-206ENST00000524277 SDF4Q9BRK5 362 aa13.55□□□□□ -0.24
SPARC-206ENST00000524277 JPH1Q9HDC5 661 aaPredicted RBP13.55□□□□□ -0.24
SPARC-206ENST00000524277 RIC8AQ9NPQ8 531 aa13.55□□□□□ -0.24
SPARC-206ENST00000524277 SLC9A2Q9UBY0 812 aa13.55□□□□□ -0.24
SPARC-206ENST00000524277 TUBE1Q9UJT0 475 aa13.55□□□□□ -0.24
SPARC-206ENST00000524277 KAT6AQ92794 2004 aa13.55□□□□□ -0.24
SPARC-206ENST00000524277 NFASCO94856 1347 aa13.55□□□□□ -0.24
SPARC-206ENST00000524277 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.54□□□□□ -0.24
SPARC-206ENST00000524277 ZBTB43O43298 467 aa13.54□□□□□ -0.24
SPARC-206ENST00000524277 NCK2O43639 380 aa13.54□□□□□ -0.24
SPARC-206ENST00000524277 CHRNA1P02708 482 aa13.54□□□□□ -0.24
SPARC-206ENST00000524277 COL9A1P20849 921 aa13.54□□□□□ -0.24
SPARC-206ENST00000524277 SLC26A2P50443 739 aa13.54□□□□□ -0.24
SPARC-206ENST00000524277 EXOSC10Q01780 885 aaKnown RBP13.54□□□□□ -0.24
SPARC-206ENST00000524277 AP3B2Q13367 1082 aa13.54□□□□□ -0.24
SPARC-206ENST00000524277 UBE2SQ16763 222 aa13.54□□□□□ -0.24
SPARC-206ENST00000524277 RTN1Q16799 776 aa13.54□□□□□ -0.24
SPARC-206ENST00000524277 LEXMQ3ZCV2 418 aa13.54□□□□□ -0.24
SPARC-206ENST00000524277 MCTP2Q6DN12 878 aa13.54□□□□□ -0.24
SPARC-206ENST00000524277 APOA5Q6Q788 366 aa13.54□□□□□ -0.24
SPARC-206ENST00000524277 CENPQQ7L2Z9 268 aaPredicted RBP13.54□□□□□ -0.24
SPARC-206ENST00000524277 PLPPR4Q7Z2D5 763 aa13.54□□□□□ -0.24
SPARC-206ENST00000524277 TMEM192Q8IY95 271 aa13.54□□□□□ -0.24
SPARC-206ENST00000524277 NME8Q8N427 588 aa13.54□□□□□ -0.24
SPARC-206ENST00000524277 C17orf80Q9BSJ5 609 aa13.54□□□□□ -0.24
SPARC-206ENST00000524277 UBE2ZQ9H832 354 aaPredicted RBP13.54□□□□□ -0.24
SPARC-206ENST00000524277 KCNH7Q9NS40 1196 aa13.54□□□□□ -0.24
SPARC-206ENST00000524277 MICAL3Q7RTP6 2002 aa13.54□□□□□ -0.24
SPARC-206ENST00000524277 COL4A6Q14031 1691 aa13.53□□□□□ -0.24
SPARC-206ENST00000524277 REV3LO60673 3130 aa13.53□□□□□ -0.24
SPARC-206ENST00000524277 CCDC196A0A1B0GTZ2 297 aa13.53□□□□□ -0.24
SPARC-206ENST00000524277 UPP2O95045 317 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms