RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 IRX2Q9BZI1 471 aaPredicted RBP8.75□□□□□ -1.01
SPIDR-223ENST00000524033 PI4KBQ9UBF8 816 aa8.75□□□□□ -1.01
SPIDR-223ENST00000524033 SRRDQ9UH36 339 aa8.75□□□□□ -1.01
SPIDR-223ENST00000524033 FEZ2Q9UHY8 353 aaPredicted RBP8.75□□□□□ -1.01
SPIDR-223ENST00000524033 SLC45A1Q9Y2W3 748 aa8.75□□□□□ -1.01
SPIDR-223ENST00000524033 FAM196BA6NMK8 535 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 PRKAB2O43741 272 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 KIF5CO60282 957 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 APPP05067 770 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 TUBBP07437 444 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 CDK11BP21127 795 aaKnown RBP8.74□□□□□ -1.01
SPIDR-223ENST00000524033 CTGFP29279 349 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 KRT2P35908 639 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 COPB1P53618 953 aaKnown RBP8.74□□□□□ -1.01
SPIDR-223ENST00000524033 FCGRTP55899 365 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 SPAG1Q07617 926 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 PPARAQ07869 468 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 SPP2Q13103 211 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 GPS2Q13227 327 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 SART3Q15020 963 aaKnown RBP8.74□□□□□ -1.01
SPIDR-223ENST00000524033 KRT31Q15323 416 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 HSP90AA4PQ58FG1 418 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 WDR93Q6P2C0 686 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 PDXDC2PQ6P474 469 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 MFSD6Q6ZSS7 791 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 HDXQ7Z353 690 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 PPFIBP1Q86W92 1011 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 TMTC1Q8IUR5 882 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 FAM177A1Q8N128 213 aaPredicted RBP8.74□□□□□ -1.01
SPIDR-223ENST00000524033 ZNF280CQ8ND82 737 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 EPS8L1Q8TE68 723 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 CCDC34Q96HJ3 373 aa8.74□□□□□ -1.01
SPIDR-223ENST00000524033 DHX36Q9H2U1 1008 aaKnown RBP8.74□□□□□ -1.01
SPIDR-223ENST00000524033 RNF41Q9H4P4 317 aaPredicted RBP8.74□□□□□ -1.01
SPIDR-223ENST00000524033 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.74□□□□□ -1.01
SPIDR-223ENST00000524033 BIN2Q9UBW5 565 aaPredicted RBP8.74□□□□□ -1.01
SPIDR-223ENST00000524033 HERC5Q9UII4 1024 aaKnown RBP8.74□□□□□ -1.01
SPIDR-223ENST00000524033 REXO2Q9Y3B8 237 aaKnown RBP8.74□□□□□ -1.01
SPIDR-223ENST00000524033 DDX60LQ5H9U9 1706 aaKnown RBP8.74□□□□□ -1.01
SPIDR-223ENST00000524033 CTAGE9A4FU28 777 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 USP17L5A8MUK1 530 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 RNF225M0QZC1 329 aaPredicted RBP8.73□□□□□ -1.01
SPIDR-223ENST00000524033 DXOO77932 396 aaKnown RBP8.73□□□□□ -1.01
SPIDR-223ENST00000524033 BCRP11274 1271 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 CASP14P31944 242 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 GRK4P32298 578 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 CAP2P40123 477 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 AARSP49588 968 aaKnown RBP eCLIP8.73□□□□□ -1.01
SPIDR-223ENST00000524033 VSNL1P62760 191 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 KCNC4Q03721 635 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 ZSCAN26Q16670 478 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 ZNF569Q5MCW4 686 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 TMED8Q6PL24 325 aaPredicted RBP8.73□□□□□ -1.01
SPIDR-223ENST00000524033 TRAPPC11Q7Z392 1133 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 CCDC84Q86UT8 332 aaPredicted RBP8.73□□□□□ -1.01
SPIDR-223ENST00000524033 ACRBPQ8NEB7 543 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 FAM71BQ8TC56 605 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 SMCR8Q8TEV9 937 aaPredicted RBP8.73□□□□□ -1.01
SPIDR-223ENST00000524033 TGFBRAP1Q8WUH2 860 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 EPSTI1Q96J88 318 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 PYM1Q9BRP8 204 aaKnown RBP8.73□□□□□ -1.01
SPIDR-223ENST00000524033 TRIM34Q9BYJ4 488 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 GBP3Q9H0R5 595 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 ABCB6Q9NP58 842 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 CABP5Q9NP86 173 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 ABHD10Q9NUJ1 306 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 RBM28Q9NW13 759 aaKnown RBP8.73□□□□□ -1.01
SPIDR-223ENST00000524033 MAP10Q9P2G4 905 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 RWDD2AQ9UIY3 292 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 ADAM21Q9UKJ8 722 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 AGTPBP1Q9UPW5 1226 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 CTNND2Q9UQB3 1225 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.73□□□□□ -1.01
SPIDR-223ENST00000524033 TNKSO95271 1327 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 ADGRA2Q96PE1 1338 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 ATAD5Q96QE3 1844 aa8.73□□□□□ -1.01
SPIDR-223ENST00000524033 NAV1Q8NEY1 1877 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 CDK5RAP2Q96SN8 1893 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 RANBP2P49792 3224 aaKnown RBP8.72□□□□□ -1.01
SPIDR-223ENST00000524033 ERLIN1O75477 346 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 DDAH1O94760 285 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 PCP11498 1178 aaKnown RBP8.72□□□□□ -1.01
SPIDR-223ENST00000524033 CYP7A1P22680 504 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 CASP1P29466 404 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 ACTN2P35609 894 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 TRAPPC10P48553 1259 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 TDO2P48775 406 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 STX17P56962 302 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 PRKCZQ05513 592 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 PABPC4Q13310 644 aaKnown RBP eCLIP8.72□□□□□ -1.01
SPIDR-223ENST00000524033 RRP1BQ14684 758 aaKnown RBP8.72□□□□□ -1.01
SPIDR-223ENST00000524033 MEA1Q16626 185 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 FILIP1LQ4L180 1135 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 TTC38Q5R3I4 469 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 TREML2Q5T2D2 321 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 CYP26C1Q6V0L0 522 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 TMTC3Q6ZXV5 915 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 ADGRA1Q86SQ6 560 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 IRF2BP1Q8IU81 584 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 MAPKAPK5Q8IW41 473 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms