RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 V9GY48 417 aaPredicted RBP17.33■□□□□ 0.36
PCM1-218ENST00000523055 NID2Q14112 1375 aa17.32■□□□□ 0.36
PCM1-218ENST00000523055 PIK3CDO00329 1044 aa17.32■□□□□ 0.36
PCM1-218ENST00000523055 PSMA5P28066 241 aa17.32■□□□□ 0.36
PCM1-218ENST00000523055 CCND2P30279 289 aa17.32■□□□□ 0.36
PCM1-218ENST00000523055 AFG1LQ8WV93 481 aa17.32■□□□□ 0.36
PCM1-218ENST00000523055 RAD9AQ99638 391 aa17.32■□□□□ 0.36
PCM1-218ENST00000523055 TECTAO75443 2155 aa17.31■□□□□ 0.36
PCM1-218ENST00000523055 DCXO43602 365 aa17.31■□□□□ 0.36
PCM1-218ENST00000523055 GH1P01241 217 aa17.31■□□□□ 0.36
PCM1-218ENST00000523055 RCAN1P53805 252 aa17.31■□□□□ 0.36
PCM1-218ENST00000523055 SP2Q02086 613 aa17.31■□□□□ 0.36
PCM1-218ENST00000523055 RBL2Q08999 1139 aa17.31■□□□□ 0.36
PCM1-218ENST00000523055 GDF6Q6KF10 455 aaPredicted RBP17.31■□□□□ 0.36
PCM1-218ENST00000523055 CNKSR3Q6P9H4 555 aa17.31■□□□□ 0.36
PCM1-218ENST00000523055 FBXL16Q8N461 479 aa17.31■□□□□ 0.36
PCM1-218ENST00000523055 CAGE1Q8TC20 777 aa17.31■□□□□ 0.36
PCM1-218ENST00000523055 AFAP1L1Q8TED9 768 aa17.31■□□□□ 0.36
PCM1-218ENST00000523055 CUL5Q93034 780 aa17.31■□□□□ 0.36
PCM1-218ENST00000523055 PHOX2BQ99453 314 aa17.31■□□□□ 0.36
PCM1-218ENST00000523055 ZBED2Q9BTP6 218 aa17.31■□□□□ 0.36
PCM1-218ENST00000523055 BCAS3Q9H6U6 928 aa17.31■□□□□ 0.36
PCM1-218ENST00000523055 PSTPIP2Q9H939 334 aa17.31■□□□□ 0.36
PCM1-218ENST00000523055 NCOA5Q9HCD5 579 aaKnown RBP17.31■□□□□ 0.36
PCM1-218ENST00000523055 STXBP3O00186 592 aa17.3■□□□□ 0.36
PCM1-218ENST00000523055 SEC24BO95487 1268 aa17.3■□□□□ 0.36
PCM1-218ENST00000523055 MMP3P08254 477 aa17.3■□□□□ 0.36
PCM1-218ENST00000523055 UBA1P22314 1058 aaKnown RBP17.3■□□□□ 0.36
PCM1-218ENST00000523055 NAPAP54920 295 aa17.3■□□□□ 0.36
PCM1-218ENST00000523055 CCT2P78371 535 aaKnown RBP17.3■□□□□ 0.36
PCM1-218ENST00000523055 SEMA3FQ13275 785 aa17.3■□□□□ 0.36
PCM1-218ENST00000523055 PTGISQ16647 500 aa17.3■□□□□ 0.36
PCM1-218ENST00000523055 TRAF7Q6Q0C0 670 aa17.3■□□□□ 0.36
PCM1-218ENST00000523055 SESTD1Q86VW0 696 aa17.3■□□□□ 0.36
PCM1-218ENST00000523055 C17orf80Q9BSJ5 609 aa17.3■□□□□ 0.36
PCM1-218ENST00000523055 RTEL1Q9NZ71 1219 aa17.3■□□□□ 0.36
PCM1-218ENST00000523055 CYP46A1Q9Y6A2 500 aa17.3■□□□□ 0.36
PCM1-218ENST00000523055 C19orf67A6NJJ6 358 aa17.3■□□□□ 0.36
PCM1-218ENST00000523055 H3BQ06 376 aaPredicted RBP17.3■□□□□ 0.36
PCM1-218ENST00000523055 KPNA6O60684 536 aa17.3■□□□□ 0.36
PCM1-218ENST00000523055 SELPP16109 830 aa17.3■□□□□ 0.36
PCM1-218ENST00000523055 PDIA3P30101 505 aaKnown RBP17.3■□□□□ 0.36
PCM1-218ENST00000523055 ZP2Q05996 745 aa17.3■□□□□ 0.36
PCM1-218ENST00000523055 MKRN4PQ13434 485 aaPredicted RBP17.3■□□□□ 0.36
PCM1-218ENST00000523055 COL19A1Q14993 1142 aa17.3■□□□□ 0.36
PCM1-218ENST00000523055 CSPP1Q1MSJ5 1256 aa17.3■□□□□ 0.36
PCM1-218ENST00000523055 HFE2Q6ZVN8 426 aa17.3■□□□□ 0.36
PCM1-218ENST00000523055 LRRC8DQ7L1W4 858 aa17.3■□□□□ 0.36
PCM1-218ENST00000523055 KAT2BQ92831 832 aa17.3■□□□□ 0.36
PCM1-218ENST00000523055 PHKBQ93100 1093 aa17.3■□□□□ 0.36
PCM1-218ENST00000523055 PGBD1Q96JS3 809 aa17.3■□□□□ 0.36
PCM1-218ENST00000523055 CACNA1HO95180 2353 aa17.29■□□□□ 0.36
PCM1-218ENST00000523055 ADAMTS3O15072 1205 aa17.29■□□□□ 0.36
PCM1-218ENST00000523055 GGPS1O95749 300 aa17.29■□□□□ 0.36
PCM1-218ENST00000523055 EVCP57679 992 aa17.29■□□□□ 0.36
PCM1-218ENST00000523055 CHMP4BP1P59074 171 aa17.29■□□□□ 0.36
PCM1-218ENST00000523055 NTRK3Q16288 839 aa17.29■□□□□ 0.36
PCM1-218ENST00000523055 INPP4AQ96PE3 977 aaPredicted RBP17.29■□□□□ 0.36
PCM1-218ENST00000523055 TM6SF1Q9BZW5 370 aa17.29■□□□□ 0.36
PCM1-218ENST00000523055 NOD1Q9Y239 953 aa17.29■□□□□ 0.36
PCM1-218ENST00000523055 TELO2Q9Y4R8 837 aa17.29■□□□□ 0.36
PCM1-218ENST00000523055 KAT6AQ92794 2004 aa17.28■□□□□ 0.36
PCM1-218ENST00000523055 ABHD14A-ACY1A0A1B0GW23 586 aa17.28■□□□□ 0.36
PCM1-218ENST00000523055 ZNF286BP0CG31 522 aa17.28■□□□□ 0.36
PCM1-218ENST00000523055 CKBP12277 381 aa17.28■□□□□ 0.36
PCM1-218ENST00000523055 MBTPS1Q14703 1052 aa17.28■□□□□ 0.36
PCM1-218ENST00000523055 PKN1Q16512 942 aa17.28■□□□□ 0.36
PCM1-218ENST00000523055 HSDL1Q3SXM5 330 aa17.28■□□□□ 0.36
PCM1-218ENST00000523055 BRDTQ58F21 947 aaPredicted RBP17.28■□□□□ 0.36
PCM1-218ENST00000523055 MYSM1Q5VVJ2 828 aa17.28■□□□□ 0.36
PCM1-218ENST00000523055 PCNX4Q63HM2 1172 aa17.28■□□□□ 0.36
PCM1-218ENST00000523055 DHX37Q8IY37 1157 aaKnown RBP17.28■□□□□ 0.36
PCM1-218ENST00000523055 MRPL38Q96DV4 380 aaKnown RBP17.28■□□□□ 0.36
PCM1-218ENST00000523055 BARHL2Q9NY43 387 aa17.28■□□□□ 0.36
PCM1-218ENST00000523055 WDR81Q562E7 1941 aa17.27■□□□□ 0.36
PCM1-218ENST00000523055 PFKFB3Q16875 520 aaPredicted RBP17.27■□□□□ 0.35
PCM1-218ENST00000523055 TRIM71Q2Q1W2 868 aaKnown RBP17.27■□□□□ 0.35
PCM1-218ENST00000523055 PUS10Q3MIT2 529 aaKnown RBP17.27■□□□□ 0.35
PCM1-218ENST00000523055 CELF3Q5SZQ8 465 aaKnown RBP17.27■□□□□ 0.35
PCM1-218ENST00000523055 FAM117BQ6P1L5 589 aa17.27■□□□□ 0.35
PCM1-218ENST00000523055 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.27■□□□□ 0.35
PCM1-218ENST00000523055 SP7Q8TDD2 431 aaPredicted RBP17.27■□□□□ 0.35
PCM1-218ENST00000523055 WNT8BQ93098 351 aa17.27■□□□□ 0.35
PCM1-218ENST00000523055 EMID1Q96A84 441 aaPredicted RBP17.27■□□□□ 0.35
PCM1-218ENST00000523055 RIC8AQ9NPQ8 531 aa17.27■□□□□ 0.35
PCM1-218ENST00000523055 TMEM260Q9NX78 707 aa17.27■□□□□ 0.35
PCM1-218ENST00000523055 PCDHA6Q9UN73 950 aa17.27■□□□□ 0.35
PCM1-218ENST00000523055 PCDHA8Q9Y5H6 950 aa17.27■□□□□ 0.35
PCM1-218ENST00000523055 ZDBF2Q9HCK1 2354 aa17.27■□□□□ 0.35
PCM1-218ENST00000523055 CCDC196A0A1B0GTZ2 297 aa17.26■□□□□ 0.35
PCM1-218ENST00000523055 SPDYE3A6NKU9 549 aa17.26■□□□□ 0.35
PCM1-218ENST00000523055 DTNBO60941 627 aa17.26■□□□□ 0.35
PCM1-218ENST00000523055 SCG2P13521 617 aa17.26■□□□□ 0.35
PCM1-218ENST00000523055 ADCY7P51828 1080 aa17.26■□□□□ 0.35
PCM1-218ENST00000523055 HTRA4P83105 476 aaPredicted RBP17.26■□□□□ 0.35
PCM1-218ENST00000523055 STK3Q13188 491 aa17.26■□□□□ 0.35
PCM1-218ENST00000523055 GNPTABQ3T906 1256 aa17.26■□□□□ 0.35
PCM1-218ENST00000523055 PPP1R18Q6NYC8 613 aa17.26■□□□□ 0.35
PCM1-218ENST00000523055 CCDC155Q8N6L0 562 aa17.26■□□□□ 0.35
PCM1-218ENST00000523055 FBXO22Q8NEZ5 403 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms