RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 FIGNQ5HY92 759 aa7.27□□□□□ -1.25
SKP1-208ENST00000521216 HHIPL2Q6UWX4 724 aa7.27□□□□□ -1.25
SKP1-208ENST00000521216 DDX46Q7L014 1031 aaKnown RBP7.27□□□□□ -1.25
SKP1-208ENST00000521216 FAM126BQ8IXS8 530 aa7.27□□□□□ -1.25
SKP1-208ENST00000521216 BOCQ9BWV1 1114 aa7.27□□□□□ -1.25
SKP1-208ENST00000521216 GCM1Q9NP62 436 aa7.27□□□□□ -1.25
SKP1-208ENST00000521216 DTLQ9NZJ0 730 aa7.27□□□□□ -1.25
SKP1-208ENST00000521216 PRAMEF25A6NGN4 478 aa7.26□□□□□ -1.25
SKP1-208ENST00000521216 FAM90A27PA6NNH2 459 aa7.26□□□□□ -1.25
SKP1-208ENST00000521216 NFIBO00712 420 aa7.26□□□□□ -1.25
SKP1-208ENST00000521216 ATF2P15336 505 aa7.26□□□□□ -1.25
SKP1-208ENST00000521216 MECP2P51608 486 aaKnown RBP7.26□□□□□ -1.25
SKP1-208ENST00000521216 EPHA5P54756 1037 aa7.26□□□□□ -1.25
SKP1-208ENST00000521216 NKX3-2P78367 333 aa7.26□□□□□ -1.25
SKP1-208ENST00000521216 CACNB2Q08289 660 aaPredicted RBP7.26□□□□□ -1.25
SKP1-208ENST00000521216 STRN3Q13033 797 aa7.26□□□□□ -1.25
SKP1-208ENST00000521216 TMEM132BQ14DG7 1078 aa7.26□□□□□ -1.25
SKP1-208ENST00000521216 PAN2Q504Q3 1202 aaKnown RBP7.26□□□□□ -1.25
SKP1-208ENST00000521216 FSTL4Q6MZW2 842 aa7.26□□□□□ -1.25
SKP1-208ENST00000521216 ATG14Q6ZNE5 492 aa7.26□□□□□ -1.25
SKP1-208ENST00000521216 RNF180Q86T96 592 aa7.26□□□□□ -1.25
SKP1-208ENST00000521216 MIB1Q86YT6 1006 aa7.26□□□□□ -1.25
SKP1-208ENST00000521216 IGDCC3Q8IVU1 814 aa7.26□□□□□ -1.25
SKP1-208ENST00000521216 OR2W6PQ8NHA6 318 aa7.26□□□□□ -1.25
SKP1-208ENST00000521216 RNF38Q9H0F5 515 aa7.26□□□□□ -1.25
SKP1-208ENST00000521216 B4GALT6Q9UBX8 382 aa7.26□□□□□ -1.25
SKP1-208ENST00000521216 TCAF2A6NFQ2 919 aa7.25□□□□□ -1.25
SKP1-208ENST00000521216 H7C1D1 291 aa7.25□□□□□ -1.25
SKP1-208ENST00000521216 CLASP2O75122 1294 aaKnown RBP7.25□□□□□ -1.25
SKP1-208ENST00000521216 LRG1P02750 347 aa7.25□□□□□ -1.25
SKP1-208ENST00000521216 FBLN1P23142 703 aa7.25□□□□□ -1.25
SKP1-208ENST00000521216 LIMS1P48059 325 aa7.25□□□□□ -1.25
SKP1-208ENST00000521216 TEPPQ6URK8 271 aa7.25□□□□□ -1.25
SKP1-208ENST00000521216 STK32CQ86UX6 486 aa7.25□□□□□ -1.25
SKP1-208ENST00000521216 ANKLE2Q86XL3 938 aa7.25□□□□□ -1.25
SKP1-208ENST00000521216 SMARCC2Q8TAQ2 1214 aa7.25□□□□□ -1.25
SKP1-208ENST00000521216 GPR101Q96P66 508 aaPredicted RBP7.25□□□□□ -1.25
SKP1-208ENST00000521216 SYT3Q9BQG1 590 aa7.25□□□□□ -1.25
SKP1-208ENST00000521216 THG1LQ9NWX6 298 aaKnown RBP7.25□□□□□ -1.25
SKP1-208ENST00000521216 IRAK3Q9Y616 596 aa7.25□□□□□ -1.25
SKP1-208ENST00000521216 IRS2Q9Y4H2 1338 aa7.25□□□□□ -1.25
SKP1-208ENST00000521216 ACOT7O00154 380 aa7.24□□□□□ -1.25
SKP1-208ENST00000521216 F2P00734 622 aa7.24□□□□□ -1.25
SKP1-208ENST00000521216 C8BP07358 591 aa7.24□□□□□ -1.25
SKP1-208ENST00000521216 CYP2C8P10632 490 aa7.24□□□□□ -1.25
SKP1-208ENST00000521216 FAHP16930 419 aa7.24□□□□□ -1.25
SKP1-208ENST00000521216 GJA4P35212 333 aa7.24□□□□□ -1.25
SKP1-208ENST00000521216 IL2P60568 153 aa7.24□□□□□ -1.25
SKP1-208ENST00000521216 FOXO4P98177 505 aa7.24□□□□□ -1.25
SKP1-208ENST00000521216 SEC23AQ15436 765 aa7.24□□□□□ -1.25
SKP1-208ENST00000521216 ZNF174Q15697 407 aa7.24□□□□□ -1.25
SKP1-208ENST00000521216 PKN1Q16512 942 aa7.24□□□□□ -1.25
SKP1-208ENST00000521216 CR1LQ2VPA4 569 aa7.24□□□□□ -1.25
SKP1-208ENST00000521216 KIF18BQ86Y91 864 aa7.24□□□□□ -1.25
SKP1-208ENST00000521216 NOSTRINQ8IVI9 506 aa7.24□□□□□ -1.25
SKP1-208ENST00000521216 TTLL11Q8NHH1 800 aa7.24□□□□□ -1.25
SKP1-208ENST00000521216 CPA5Q8WXQ8 436 aa7.24□□□□□ -1.25
SKP1-208ENST00000521216 USP7Q93009 1102 aa7.24□□□□□ -1.25
SKP1-208ENST00000521216 PPP1R16BQ96T49 567 aa7.24□□□□□ -1.25
SKP1-208ENST00000521216 TMX1Q9H3N1 280 aa7.24□□□□□ -1.25
SKP1-208ENST00000521216 PCIF1Q9H4Z3 704 aa7.24□□□□□ -1.25
SKP1-208ENST00000521216 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.23□□□□□ -1.25
SKP1-208ENST00000521216 C1QTNF9P0C862 333 aa7.23□□□□□ -1.25
SKP1-208ENST00000521216 ZBTB48P10074 688 aaPredicted RBP7.23□□□□□ -1.25
SKP1-208ENST00000521216 ATP2A2P16615 1042 aaKnown RBP7.23□□□□□ -1.25
SKP1-208ENST00000521216 KIF11P52732 1056 aa7.23□□□□□ -1.25
SKP1-208ENST00000521216 NFKB2Q00653 900 aa7.23□□□□□ -1.25
SKP1-208ENST00000521216 TMC5Q6UXY8 1006 aa7.23□□□□□ -1.25
SKP1-208ENST00000521216 OTOP1Q7RTM1 612 aa7.23□□□□□ -1.25
SKP1-208ENST00000521216 KRT26Q7Z3Y9 468 aa7.23□□□□□ -1.25
SKP1-208ENST00000521216 STRA8Q7Z7C7 330 aa7.23□□□□□ -1.25
SKP1-208ENST00000521216 CHTF18Q8WVB6 975 aa7.23□□□□□ -1.25
SKP1-208ENST00000521216 SIGLEC10Q96LC7 697 aa7.23□□□□□ -1.25
SKP1-208ENST00000521216 NGRNQ9NPE2 291 aaKnown RBP7.23□□□□□ -1.25
SKP1-208ENST00000521216 KCNH7Q9NS40 1196 aa7.23□□□□□ -1.25
SKP1-208ENST00000521216 RBPJLQ9UBG7 517 aa7.23□□□□□ -1.25
SKP1-208ENST00000521216 CNOT6Q9ULM6 557 aaKnown RBP7.23□□□□□ -1.25
SKP1-208ENST00000521216 VIL1P09327 827 aaKnown RBP7.22□□□□□ -1.25
SKP1-208ENST00000521216 SLC9A1P19634 815 aa7.22□□□□□ -1.25
SKP1-208ENST00000521216 GLDCP23378 1020 aa7.22□□□□□ -1.25
SKP1-208ENST00000521216 KPNA1P52294 538 aaPredicted RBP7.22□□□□□ -1.25
SKP1-208ENST00000521216 B3GNT8Q7Z7M8 397 aa7.22□□□□□ -1.25
SKP1-208ENST00000521216 KIAA1958Q8N8K9 716 aa7.22□□□□□ -1.25
SKP1-208ENST00000521216 ERCC4Q92889 916 aaPredicted RBP7.22□□□□□ -1.25
SKP1-208ENST00000521216 ORAI3Q9BRQ5 295 aa7.22□□□□□ -1.25
SKP1-208ENST00000521216 OXSMQ9NWU1 459 aa7.22□□□□□ -1.25
SKP1-208ENST00000521216 H2AFY2Q9P0M6 372 aaPredicted RBP7.22□□□□□ -1.25
SKP1-208ENST00000521216 ARHGAP28Q9P2N2 729 aa7.22□□□□□ -1.25
SKP1-208ENST00000521216 SMG5Q9UPR3 1016 aaKnown RBP7.22□□□□□ -1.25
SKP1-208ENST00000521216 C4BPAP04003 597 aaKnown RBP7.21□□□□□ -1.26
SKP1-208ENST00000521216 IGFBP6P24592 240 aaPredicted RBP7.21□□□□□ -1.26
SKP1-208ENST00000521216 DSG1Q02413 1049 aa7.21□□□□□ -1.26
SKP1-208ENST00000521216 SSPNQ14714 243 aa7.21□□□□□ -1.26
SKP1-208ENST00000521216 VASNQ6EMK4 673 aa7.21□□□□□ -1.26
SKP1-208ENST00000521216 B3GALT1Q9Y5Z6 326 aa7.21□□□□□ -1.26
SKP1-208ENST00000521216 DVL2O14641 736 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 FOXP2O15409 715 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 FKBP9O95302 570 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 MMEP08473 750 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 PI3P19957 117 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms