RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 NCLP19338 710 aaKnown RBP6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 CCND3P30281 292 aaPredicted RBP6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 SOX10P56693 466 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 FUT2Q10981 343 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 NTRK3Q16288 839 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 UVSSAQ2YD98 709 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 RILPL1Q5EBL4 403 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 ODR4Q5SWX8 454 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 C1orf53Q5VUE5 145 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 LARP1BQ659C4 914 aaKnown RBP6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 HAUS3Q68CZ6 603 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 MCTP1Q6DN14 999 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 PPP4R3AQ6IN85 833 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 CAVIN1Q6NZI2 390 aaKnown RBP6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 USP17L6PQ6QN14 398 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 EEPD1Q7L9B9 569 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 C7orf31Q8N865 590 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 NSUN7Q8NE18 718 aaKnown RBP6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 NEK9Q8TD19 979 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 ATP6V0A1Q93050 837 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 CCDC34Q96HJ3 373 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 TMX3Q96JJ7 454 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 FAM20AQ96MK3 541 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 TAAR1Q96RJ0 339 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 RIT2Q99578 217 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 MXRA8Q9BRK3 442 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 ZNF577Q9BSK1 485 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 PHF20Q9BVI0 1012 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 TEKT3Q9BXF9 490 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 GTPBP4Q9BZE4 634 aaKnown RBP6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 SMARCAD1Q9H4L7 1026 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 ZSCAN16Q9H4T2 348 aaPredicted RBP6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 JADE2Q9NQC1 790 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 DDX25Q9UHL0 483 aaKnown RBP6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 PHF24Q9UPV7 400 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 SAMM50Q9Y512 469 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 PLXNA1Q9UIW2 1896 aa6.36□□□□□ -1.39
CTNNA1-220ENST00000520260 hCG_1642624A0A1W2PR95 340 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 A6NJR5 290 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 SPATA31C2B4DYI2 1134 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 IPO5O00410 1097 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 BACH1O14867 736 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 NEMFO60524 1076 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 CCNT1O60563 726 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 PPP1R11O60927 126 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 GGPS1O95749 300 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 MYL3P08590 195 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 TXLNAP40222 546 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 ADCYAP1R1P41586 468 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 CLK2P49760 499 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 ACLYP53396 1101 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 NKX3-2P78367 333 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 CDC42EP1Q00587 391 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 BFSP2Q13515 415 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 LRRC41Q15345 812 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 MTFR1Q15390 333 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 UBE2SQ16763 222 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 LETM2Q2VYF4 491 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 PRR16Q569H4 304 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 CELF3Q5SZQ8 465 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 JAKMIP3Q5VZ66 844 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 ZNF746Q6NUN9 644 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 NFRKBQ6P4R8 1299 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 PLA2G4DQ86XP0 818 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 NOSTRINQ8IVI9 506 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 CKAP2LQ8IYA6 745 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 DIS3L2Q8IYB7 885 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 KCTD17Q8N5Z5 321 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 NECAB1Q8N987 351 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 RETREG2Q8NC44 543 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 FBXO18Q8NFZ0 1043 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 GPT2Q8TD30 523 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 TBCKQ8TEA7 893 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 SEPT1Q8WYJ6 367 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 GLG1Q92896 1179 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 TOX2Q96NM4 488 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 SENP6Q9GZR1 1112 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 FAM217BQ9NTX9 383 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 ERAP1Q9NZ08 941 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 FLRT1Q9NZU1 646 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 SLC9A2Q9UBY0 812 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 PPME1Q9Y570 386 aa6.35□□□□□ -1.39
CTNNA1-220ENST00000520260 A0A1W2PQ45 241 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 A0A1W2PQY0 241 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 RRN3P2A6NIE6 340 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 PEX10O60683 326 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 CAND2O75155 1236 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 KIF20AO95235 890 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 ASGR1P07306 291 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 PFKMP08237 780 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 SMPD1P17405 629 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 UBA1P22314 1058 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 TMOD1P28289 359 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 GJB2P29033 226 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 CIITAP33076 1130 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 RGS19P49795 217 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 DNM2P50570 870 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 KCNA10Q16322 511 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 PKN1Q16512 942 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 CALCRLQ16602 461 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms