RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 MBOAT7Q96N66 472 aa12.66□□□□□ -0.38
SCARNA20-201ENST00000516768 CTAGE1Q96RT6 745 aa12.66□□□□□ -0.38
SCARNA20-201ENST00000516768 ZNF577Q9BSK1 485 aa12.66□□□□□ -0.38
SCARNA20-201ENST00000516768 RNPEPQ9H4A4 650 aa12.66□□□□□ -0.38
SCARNA20-201ENST00000516768 GTF2IRD1Q9UHL9 959 aa12.66□□□□□ -0.38
SCARNA20-201ENST00000516768 IGKV6D-21A0A0A0MT36 114 aa12.65□□□□□ -0.38
SCARNA20-201ENST00000516768 A0A1W2PPC1 479 aa12.65□□□□□ -0.38
SCARNA20-201ENST00000516768 MSH4O15457 936 aa12.65□□□□□ -0.38
SCARNA20-201ENST00000516768 LGR5O75473 907 aa12.65□□□□□ -0.38
SCARNA20-201ENST00000516768 CYP2C9P11712 490 aa12.65□□□□□ -0.38
SCARNA20-201ENST00000516768 KRT2P35908 639 aa12.65□□□□□ -0.38
SCARNA20-201ENST00000516768 NR5A1Q13285 461 aa12.65□□□□□ -0.38
SCARNA20-201ENST00000516768 EARS2Q5JPH6 523 aaKnown RBP12.65□□□□□ -0.38
SCARNA20-201ENST00000516768 HABP4Q5JVS0 413 aaKnown RBP12.65□□□□□ -0.38
SCARNA20-201ENST00000516768 UTP14CQ5TAP6 766 aaKnown RBP12.65□□□□□ -0.38
SCARNA20-201ENST00000516768 PPP4R3AQ6IN85 833 aa12.65□□□□□ -0.38
SCARNA20-201ENST00000516768 ABHD15Q6UXT9 468 aa12.65□□□□□ -0.38
SCARNA20-201ENST00000516768 PIK3AP1Q6ZUJ8 805 aa12.65□□□□□ -0.38
SCARNA20-201ENST00000516768 FBXO18Q8NFZ0 1043 aa12.65□□□□□ -0.38
SCARNA20-201ENST00000516768 PCYT2Q99447 389 aa12.65□□□□□ -0.38
SCARNA20-201ENST00000516768 RIT2Q99578 217 aa12.65□□□□□ -0.38
SCARNA20-201ENST00000516768 NOC4LQ9BVI4 516 aaKnown RBP12.65□□□□□ -0.38
SCARNA20-201ENST00000516768 UBE2OQ9C0C9 1292 aaKnown RBP12.65□□□□□ -0.38
SCARNA20-201ENST00000516768 HIPK3Q9H422 1215 aa12.65□□□□□ -0.38
SCARNA20-201ENST00000516768 SMARCAD1Q9H4L7 1026 aa12.65□□□□□ -0.38
SCARNA20-201ENST00000516768 BRMS1Q9HCU9 246 aa12.65□□□□□ -0.38
SCARNA20-201ENST00000516768 CCNE2O96020 404 aa12.64□□□□□ -0.39
SCARNA20-201ENST00000516768 HOXC8P31273 242 aa12.64□□□□□ -0.39
SCARNA20-201ENST00000516768 CYP2C18P33260 490 aa12.64□□□□□ -0.39
SCARNA20-201ENST00000516768 STAT5BP51692 787 aa12.64□□□□□ -0.39
SCARNA20-201ENST00000516768 ZNF200P98182 395 aaPredicted RBP12.64□□□□□ -0.39
SCARNA20-201ENST00000516768 HIC1Q14526 733 aa12.64□□□□□ -0.39
SCARNA20-201ENST00000516768 LETM2Q2VYF4 491 aa12.64□□□□□ -0.39
SCARNA20-201ENST00000516768 PLPPR4Q7Z2D5 763 aa12.64□□□□□ -0.39
SCARNA20-201ENST00000516768 NEK8Q86SG6 692 aa12.64□□□□□ -0.39
SCARNA20-201ENST00000516768 TRIM50Q86XT4 487 aa12.64□□□□□ -0.39
SCARNA20-201ENST00000516768 DIS3L2Q8IYB7 885 aaKnown RBP12.64□□□□□ -0.39
SCARNA20-201ENST00000516768 TMEM199Q8N511 208 aa12.64□□□□□ -0.39
SCARNA20-201ENST00000516768 FAM184AQ8NB25 1140 aa12.64□□□□□ -0.39
SCARNA20-201ENST00000516768 GLG1Q92896 1179 aa12.64□□□□□ -0.39
SCARNA20-201ENST00000516768 C8orf76Q96K31 380 aa12.64□□□□□ -0.39
SCARNA20-201ENST00000516768 UIMC1Q96RL1 719 aa12.64□□□□□ -0.39
SCARNA20-201ENST00000516768 ERAP1Q9NZ08 941 aa12.64□□□□□ -0.39
SCARNA20-201ENST00000516768 ZNF215Q9UL58 517 aaPredicted RBP12.64□□□□□ -0.39
SCARNA20-201ENST00000516768 PSMD10O75832 226 aa12.63□□□□□ -0.39
SCARNA20-201ENST00000516768 TDP2O95551 362 aa12.63□□□□□ -0.39
SCARNA20-201ENST00000516768 SMIM10L2AP0DMW4 78 aa12.63□□□□□ -0.39
SCARNA20-201ENST00000516768 SMIM10L2BP0DMW5 78 aa12.63□□□□□ -0.39
SCARNA20-201ENST00000516768 CSF2RAP15509 400 aa12.63□□□□□ -0.39
SCARNA20-201ENST00000516768 GCFC2P16383 781 aaKnown RBP12.63□□□□□ -0.39
SCARNA20-201ENST00000516768 ADAM17P78536 824 aa12.63□□□□□ -0.39
SCARNA20-201ENST00000516768 FPGSQ05932 587 aa12.63□□□□□ -0.39
SCARNA20-201ENST00000516768 PTK7Q13308 1070 aa12.63□□□□□ -0.39
SCARNA20-201ENST00000516768 ZNF746Q6NUN9 644 aaPredicted RBP12.63□□□□□ -0.39
SCARNA20-201ENST00000516768 C16orf59Q7L2K0 433 aa12.63□□□□□ -0.39
SCARNA20-201ENST00000516768 SLC5A5Q92911 643 aa12.63□□□□□ -0.39
SCARNA20-201ENST00000516768 NAP1L4Q99733 375 aaKnown RBP12.63□□□□□ -0.39
SCARNA20-201ENST00000516768 PPP1R12CQ9BZL4 782 aa12.63□□□□□ -0.39
SCARNA20-201ENST00000516768 AZI2Q9H6S1 392 aa12.63□□□□□ -0.39
SCARNA20-201ENST00000516768 SETD4Q9NVD3 440 aa12.63□□□□□ -0.39
SCARNA20-201ENST00000516768 NOD1Q9Y239 953 aa12.63□□□□□ -0.39
SCARNA20-201ENST00000516768 PCDHA10Q9Y5I2 948 aa12.63□□□□□ -0.39
SCARNA20-201ENST00000516768 RANBP2P49792 3224 aaKnown RBP12.63□□□□□ -0.39
SCARNA20-201ENST00000516768 UMODL1Q5DID0 1318 aa12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 EMSYQ7Z589 1322 aa12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 NRCAMQ92823 1304 aa12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 C17orf102A2RUQ5 167 aa12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 DDX39AO00148 427 aaKnown RBP12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 PITPNM1O00562 1244 aa12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 CCNT1O60563 726 aaKnown RBP12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 GNAT1P11488 350 aa12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 SLC26A2P50443 739 aa12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 FOSBP53539 338 aa12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 EPHB4P54760 987 aa12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 CCL23P55773 120 aa12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 KRT76Q01546 638 aa12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 GUCY1B3Q02153 619 aa12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 BFSP2Q13515 415 aa12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 SAFBQ15424 915 aaKnown RBP eCLIP12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 SHHQ15465 462 aa12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 SWSAP1Q6NVH7 229 aa12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 MIS18BP1Q6P0N0 1132 aa12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 SMAP1Q8IYB5 467 aaPredicted RBP12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 TDHQ8IZJ6 230 aa12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 RETREG2Q8NC44 543 aa12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 ETNPPLQ8TBG4 499 aa12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 AFAP1L1Q8TED9 768 aa12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 TNPO1Q92973 898 aaKnown RBP12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 ATP6V0A1Q93050 837 aa12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 FAM20AQ96MK3 541 aa12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 FOXP1Q9H334 677 aaPredicted RBP12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 DDX25Q9UHL0 483 aaKnown RBP12.62□□□□□ -0.39
SCARNA20-201ENST00000516768 FAM205CA6NFA0 338 aa12.61□□□□□ -0.39
SCARNA20-201ENST00000516768 TBX3O15119 743 aa12.61□□□□□ -0.39
SCARNA20-201ENST00000516768 TREHO43280 583 aa12.61□□□□□ -0.39
SCARNA20-201ENST00000516768 SLC37A4O43826 429 aa12.61□□□□□ -0.39
SCARNA20-201ENST00000516768 GAS7O60861 476 aa12.61□□□□□ -0.39
SCARNA20-201ENST00000516768 IQCF3P0C7M6 154 aa12.61□□□□□ -0.39
SCARNA20-201ENST00000516768 RBL2Q08999 1139 aa12.61□□□□□ -0.39
SCARNA20-201ENST00000516768 PPIGQ13427 754 aaKnown RBP eCLIP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms