RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 GBA2Q9HCG7 927 aaPredicted RBP22.41■■□□□ 1.18
TRIO-223ENST00000515710 BICDL2A1A5D9 508 aa22.41■■□□□ 1.18
TRIO-223ENST00000515710 TESPA1A2RU30 521 aaPredicted RBP22.41■■□□□ 1.18
TRIO-223ENST00000515710 CCNE1P24864 410 aa22.41■■□□□ 1.18
TRIO-223ENST00000515710 ITGB3BPQ13352 177 aaPredicted RBP22.41■■□□□ 1.18
TRIO-223ENST00000515710 CTTNQ14247 550 aaKnown RBP22.41■■□□□ 1.18
TRIO-223ENST00000515710 CCDC186Q7Z3E2 898 aa22.41■■□□□ 1.18
TRIO-223ENST00000515710 C2orf69Q8N8R5 385 aa22.41■■□□□ 1.18
TRIO-223ENST00000515710 INPP4AQ96PE3 977 aaPredicted RBP22.41■■□□□ 1.18
TRIO-223ENST00000515710 NACC1Q96RE7 527 aa22.41■■□□□ 1.18
TRIO-223ENST00000515710 PAGR1Q9BTK6 254 aa22.41■■□□□ 1.18
TRIO-223ENST00000515710 MSNP26038 577 aaKnown RBP22.4■■□□□ 1.18
TRIO-223ENST00000515710 SPAG1Q07617 926 aa22.4■■□□□ 1.18
TRIO-223ENST00000515710 ARSHQ5FYA8 562 aa22.4■■□□□ 1.18
TRIO-223ENST00000515710 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.4■■□□□ 1.18
TRIO-223ENST00000515710 NCAPG2Q86XI2 1143 aa22.4■■□□□ 1.18
TRIO-223ENST00000515710 KIAA0895Q8NCT3 520 aa22.4■■□□□ 1.18
TRIO-223ENST00000515710 GTF3C2Q8WUA4 911 aaPredicted RBP22.4■■□□□ 1.18
TRIO-223ENST00000515710 CDHR1Q96JP9 859 aa22.4■■□□□ 1.18
TRIO-223ENST00000515710 CTAGE1Q96RT6 745 aa22.4■■□□□ 1.18
TRIO-223ENST00000515710 SLC39A2Q9NP94 309 aa22.4■■□□□ 1.18
TRIO-223ENST00000515710 PNMA3Q9UL41 463 aa22.4■■□□□ 1.18
TRIO-223ENST00000515710 KRT18P05783 430 aaKnown RBP22.39■■□□□ 1.18
TRIO-223ENST00000515710 P4HBP07237 508 aaKnown RBP22.39■■□□□ 1.18
TRIO-223ENST00000515710 COASYQ13057 564 aa22.39■■□□□ 1.18
TRIO-223ENST00000515710 GUF1Q8N442 669 aaKnown RBP22.39■■□□□ 1.18
TRIO-223ENST00000515710 NOC3LQ8WTT2 800 aaKnown RBP22.39■■□□□ 1.18
TRIO-223ENST00000515710 P2RX5Q93086 422 aa22.39■■□□□ 1.18
TRIO-223ENST00000515710 MOV10L1Q9BXT6 1211 aaKnown RBP22.39■■□□□ 1.18
TRIO-223ENST00000515710 TCEAL9Q9UHQ7 104 aa22.39■■□□□ 1.18
TRIO-223ENST00000515710 NRBP1Q9UHY1 535 aa22.39■■□□□ 1.18
TRIO-223ENST00000515710 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.39■■□□□ 1.18
TRIO-223ENST00000515710 FRMD3A2A2Y4 597 aa22.39■■□□□ 1.17
TRIO-223ENST00000515710 DDX39AO00148 427 aaKnown RBP22.39■■□□□ 1.17
TRIO-223ENST00000515710 RRP9O43818 475 aaKnown RBP22.39■■□□□ 1.17
TRIO-223ENST00000515710 CETPP11597 493 aa22.39■■□□□ 1.17
TRIO-223ENST00000515710 NAP1L5Q96NT1 182 aaPredicted RBP22.39■■□□□ 1.17
TRIO-223ENST00000515710 BHMT2Q9H2M3 363 aa22.39■■□□□ 1.17
TRIO-223ENST00000515710 PKD2L1Q9P0L9 805 aa22.39■■□□□ 1.17
TRIO-223ENST00000515710 RBPJLQ9UBG7 517 aa22.39■■□□□ 1.17
TRIO-223ENST00000515710 SLC45A1Q9Y2W3 748 aa22.39■■□□□ 1.17
TRIO-223ENST00000515710 GTF2A2P52657 109 aa22.38■■□□□ 1.17
TRIO-223ENST00000515710 KRT76Q01546 638 aa22.38■■□□□ 1.17
TRIO-223ENST00000515710 HSP90AA4PQ58FG1 418 aa22.38■■□□□ 1.17
TRIO-223ENST00000515710 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.38■■□□□ 1.17
TRIO-223ENST00000515710 PTGS1P23219 599 aa22.37■■□□□ 1.17
TRIO-223ENST00000515710 SFNP31947 248 aa22.37■■□□□ 1.17
TRIO-223ENST00000515710 JAK3P52333 1124 aa22.37■■□□□ 1.17
TRIO-223ENST00000515710 GIT2Q14161 759 aa22.37■■□□□ 1.17
TRIO-223ENST00000515710 GNPTABQ3T906 1256 aa22.37■■□□□ 1.17
TRIO-223ENST00000515710 FAM26FQ5R3K3 315 aa22.37■■□□□ 1.17
TRIO-223ENST00000515710 TTI2Q6NXR4 508 aa22.37■■□□□ 1.17
TRIO-223ENST00000515710 ANKRD20A12PQ8NF67 263 aa22.37■■□□□ 1.17
TRIO-223ENST00000515710 RDM1Q8NG50 284 aa22.37■■□□□ 1.17
TRIO-223ENST00000515710 THAP9Q9H5L6 903 aa22.37■■□□□ 1.17
TRIO-223ENST00000515710 GSDMDP57764 484 aa22.37■■□□□ 1.17
TRIO-223ENST00000515710 STXBP2Q15833 593 aa22.37■■□□□ 1.17
TRIO-223ENST00000515710 FILIP1LQ4L180 1135 aa22.37■■□□□ 1.17
TRIO-223ENST00000515710 CENPPQ6IPU0 288 aa22.37■■□□□ 1.17
TRIO-223ENST00000515710 HPS3Q969F9 1004 aa22.37■■□□□ 1.17
TRIO-223ENST00000515710 TRIM47Q96LD4 638 aa22.37■■□□□ 1.17
TRIO-223ENST00000515710 LXNQ9BS40 222 aa22.37■■□□□ 1.17
TRIO-223ENST00000515710 ZSWIM4Q9H7M6 989 aa22.37■■□□□ 1.17
TRIO-223ENST00000515710 ADD3Q9UEY8 706 aaKnown RBP22.37■■□□□ 1.17
TRIO-223ENST00000515710 LIMA1Q9UHB6 759 aaKnown RBP22.37■■□□□ 1.17
TRIO-223ENST00000515710 NPHP3-ACAD11A0A0J9YXS1 232 aa22.36■■□□□ 1.17
TRIO-223ENST00000515710 DCAF8L1A6NGE4 600 aa22.36■■□□□ 1.17
TRIO-223ENST00000515710 LRRC10BA6NIK2 292 aa22.36■■□□□ 1.17
TRIO-223ENST00000515710 POTEB2H3BUK9 544 aa22.36■■□□□ 1.17
TRIO-223ENST00000515710 PEX10O60683 326 aa22.36■■□□□ 1.17
TRIO-223ENST00000515710 ATP9AO75110 1047 aa22.36■■□□□ 1.17
TRIO-223ENST00000515710 COBLO75128 1261 aa22.36■■□□□ 1.17
TRIO-223ENST00000515710 CELF2O95319 508 aaKnown RBP22.36■■□□□ 1.17
TRIO-223ENST00000515710 ERCC3P19447 782 aa22.36■■□□□ 1.17
TRIO-223ENST00000515710 PMS1P54277 932 aaKnown RBP22.36■■□□□ 1.17
TRIO-223ENST00000515710 CCDC144BQ3MJ40 725 aa22.36■■□□□ 1.17
TRIO-223ENST00000515710 HERC4Q5GLZ8 1057 aaPredicted RBP22.36■■□□□ 1.17
TRIO-223ENST00000515710 FOXR2Q6PJQ5 311 aa22.36■■□□□ 1.17
TRIO-223ENST00000515710 MS4A4AQ96JQ5 239 aa22.36■■□□□ 1.17
TRIO-223ENST00000515710 SENP7Q9BQF6 1050 aa22.36■■□□□ 1.17
TRIO-223ENST00000515710 KCND2Q9NZV8 630 aa22.36■■□□□ 1.17
TRIO-223ENST00000515710 NFASCO94856 1347 aa22.36■■□□□ 1.17
TRIO-223ENST00000515710 A0A1B0GTH6 734 aa22.35■■□□□ 1.17
TRIO-223ENST00000515710 TRIM49BA6NDI0 452 aa22.35■■□□□ 1.17
TRIO-223ENST00000515710 EIF3JO75822 258 aaKnown RBP22.35■■□□□ 1.17
TRIO-223ENST00000515710 KIF20AO95235 890 aa22.35■■□□□ 1.17
TRIO-223ENST00000515710 ALDH5A1P51649 535 aaPredicted RBP22.35■■□□□ 1.17
TRIO-223ENST00000515710 NR1I3Q14994 352 aa22.35■■□□□ 1.17
TRIO-223ENST00000515710 RINT1Q6NUQ1 792 aa22.35■■□□□ 1.17
TRIO-223ENST00000515710 APTXQ7Z2E3 356 aaKnown RBP22.35■■□□□ 1.17
TRIO-223ENST00000515710 TMC6Q7Z403 805 aa22.35■■□□□ 1.17
TRIO-223ENST00000515710 FILIP1Q7Z7B0 1213 aa22.35■■□□□ 1.17
TRIO-223ENST00000515710 PIGOQ8TEQ8 1089 aa22.35■■□□□ 1.17
TRIO-223ENST00000515710 ZNF830Q96NB3 372 aaPredicted RBP22.35■■□□□ 1.17
TRIO-223ENST00000515710 WDR64B1ANS9 1081 aa22.35■■□□□ 1.17
TRIO-223ENST00000515710 B4DLN1 442 aa22.35■■□□□ 1.17
TRIO-223ENST00000515710 LYPLA2O95372 231 aa22.35■■□□□ 1.17
TRIO-223ENST00000515710 ANKRD40Q6AI12 368 aa22.35■■□□□ 1.17
TRIO-223ENST00000515710 ZNF746Q6NUN9 644 aaPredicted RBP22.35■■□□□ 1.17
TRIO-223ENST00000515710 VSTM4Q8IW00 320 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms