RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 WNT9AO14904 365 aa5.69□□□□□ -1.5
HTT-210ENST00000512909 PPP1R11O60927 126 aaPredicted RBP5.69□□□□□ -1.5
HTT-210ENST00000512909 ADAMTS4O75173 837 aa5.69□□□□□ -1.5
HTT-210ENST00000512909 CKMP06732 381 aa5.69□□□□□ -1.5
HTT-210ENST00000512909 GLI4P10075 376 aa5.69□□□□□ -1.5
HTT-210ENST00000512909 JUNBP17275 347 aaPredicted RBP5.69□□□□□ -1.5
HTT-210ENST00000512909 SDHBP21912 280 aa5.69□□□□□ -1.5
HTT-210ENST00000512909 GJA4P35212 333 aa5.69□□□□□ -1.5
HTT-210ENST00000512909 JAM2P57087 298 aa5.69□□□□□ -1.5
HTT-210ENST00000512909 ERVFRD-1P60508 538 aa5.69□□□□□ -1.5
HTT-210ENST00000512909 TMEM132BQ14DG7 1078 aa5.69□□□□□ -1.5
HTT-210ENST00000512909 ATP13A4Q4VNC1 1196 aa5.69□□□□□ -1.5
HTT-210ENST00000512909 HDGFL2Q7Z4V5 671 aaPredicted RBP5.69□□□□□ -1.5
HTT-210ENST00000512909 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.69□□□□□ -1.5
HTT-210ENST00000512909 ZNF605Q86T29 641 aa5.69□□□□□ -1.5
HTT-210ENST00000512909 RNF180Q86T96 592 aa5.69□□□□□ -1.5
HTT-210ENST00000512909 Q8N1Y9 231 aa5.69□□□□□ -1.5
HTT-210ENST00000512909 TNFRSF12AQ9NP84 129 aa5.69□□□□□ -1.5
HTT-210ENST00000512909 NGRNQ9NPE2 291 aaKnown RBP5.69□□□□□ -1.5
HTT-210ENST00000512909 ZNF652Q9Y2D9 606 aa5.69□□□□□ -1.5
HTT-210ENST00000512909 FAN1Q9Y2M0 1017 aa5.69□□□□□ -1.5
HTT-210ENST00000512909 ARAP1Q96P48 1450 aa5.69□□□□□ -1.5
HTT-210ENST00000512909 WDR97A6NE52 1622 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 BIVM-ERCC5R4GMW8 1640 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 KCNK3O14649 394 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 NKRFO15226 690 aaKnown RBP eCLIP5.68□□□□□ -1.5
HTT-210ENST00000512909 ULK1O75385 1050 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 FKBP9O95302 570 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 F2P00734 622 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 CDK11BP21127 795 aaKnown RBP5.68□□□□□ -1.5
HTT-210ENST00000512909 MAPKAPK2P49137 400 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 KIF11P52732 1056 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 LACTBP83111 547 aaPredicted RBP5.68□□□□□ -1.5
HTT-210ENST00000512909 TMPRSS15P98073 1019 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 FAPQ12884 760 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 TUSC3Q13454 348 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 FAM50AQ14320 339 aaKnown RBP5.68□□□□□ -1.5
HTT-210ENST00000512909 FIGNQ5HY92 759 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 RNF219Q5W0B1 726 aaPredicted RBP5.68□□□□□ -1.5
HTT-210ENST00000512909 ABHD17CQ6PCB6 329 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 NFXL1Q6ZNB6 911 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 KCTD1Q719H9 257 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 FKBP9P1Q75LS8 142 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 OVCH1Q7RTY7 1134 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 TMC6Q7Z403 805 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 FERMT3Q86UX7 667 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 DDX42Q86XP3 938 aaKnown RBP eCLIP5.68□□□□□ -1.5
HTT-210ENST00000512909 UHMK1Q8TAS1 419 aaKnown RBP5.68□□□□□ -1.5
HTT-210ENST00000512909 CD244Q9BZW8 370 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 EPB41L4BQ9H329 900 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 SP110Q9HB58 689 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 DCP1AQ9NPI6 582 aaPredicted RBP5.68□□□□□ -1.5
HTT-210ENST00000512909 TOMM22Q9NS69 142 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 KCNG1Q9UIX4 513 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 SRPK3Q9UPE1 567 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 SIT1Q9Y3P8 196 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 PBRM1Q86U86 1689 aa5.68□□□□□ -1.5
HTT-210ENST00000512909 ZNF891A8MT65 544 aaPredicted RBP5.67□□□□□ -1.5
HTT-210ENST00000512909 NOTOA8MTQ0 251 aa5.67□□□□□ -1.5
HTT-210ENST00000512909 PFKLP17858 780 aa5.67□□□□□ -1.5
HTT-210ENST00000512909 LSSP48449 732 aa5.67□□□□□ -1.5
HTT-210ENST00000512909 PRR5P85299 388 aa5.67□□□□□ -1.5
HTT-210ENST00000512909 AMPD3Q01432 767 aa5.67□□□□□ -1.5
HTT-210ENST00000512909 GRIN1Q05586 938 aa5.67□□□□□ -1.5
HTT-210ENST00000512909 TARBP2Q15633 366 aaKnown RBP5.67□□□□□ -1.5
HTT-210ENST00000512909 EMC4Q5J8M3 183 aa5.67□□□□□ -1.5
HTT-210ENST00000512909 FYB2Q5VWT5 728 aa5.67□□□□□ -1.5
HTT-210ENST00000512909 SPATS2Q86XZ4 545 aaKnown RBP5.67□□□□□ -1.5
HTT-210ENST00000512909 ZZZ3Q8IYH5 903 aa5.67□□□□□ -1.5
HTT-210ENST00000512909 CHTF18Q8WVB6 975 aa5.67□□□□□ -1.5
HTT-210ENST00000512909 E2F7Q96AV8 911 aa5.67□□□□□ -1.5
HTT-210ENST00000512909 GPATCH3Q96I76 525 aa5.67□□□□□ -1.5
HTT-210ENST00000512909 DIRC2Q96SL1 478 aa5.67□□□□□ -1.5
HTT-210ENST00000512909 MTFR1LQ9H019 292 aa5.67□□□□□ -1.5
HTT-210ENST00000512909 NSUN3Q9H649 340 aaKnown RBP5.67□□□□□ -1.5
HTT-210ENST00000512909 ACSS2Q9NR19 701 aa5.67□□□□□ -1.5
HTT-210ENST00000512909 ARHGAP28Q9P2N2 729 aa5.67□□□□□ -1.5
HTT-210ENST00000512909 ERICH3Q5RHP9 1530 aa5.67□□□□□ -1.5
HTT-210ENST00000512909 RUSC2Q8N2Y8 1516 aa5.67□□□□□ -1.5
HTT-210ENST00000512909 ABCA5Q8WWZ7 1642 aa5.66□□□□□ -1.5
HTT-210ENST00000512909 ZNF561-AS1K7EIQ3 104 aa5.66□□□□□ -1.5
HTT-210ENST00000512909 CLASP2O75122 1294 aaKnown RBP5.66□□□□□ -1.5
HTT-210ENST00000512909 KCNA6P17658 529 aa5.66□□□□□ -1.5
HTT-210ENST00000512909 CEBPAP49715 358 aaPredicted RBP5.66□□□□□ -1.5
HTT-210ENST00000512909 GUCY2FP51841 1108 aa5.66□□□□□ -1.5
HTT-210ENST00000512909 NKX3-2P78367 333 aa5.66□□□□□ -1.5
HTT-210ENST00000512909 SRSF3P84103 164 aaKnown RBP5.66□□□□□ -1.5
HTT-210ENST00000512909 RPTNQ6XPR3 784 aa5.66□□□□□ -1.5
HTT-210ENST00000512909 ETV3LQ6ZN32 361 aa5.66□□□□□ -1.5
HTT-210ENST00000512909 KIAA1958Q8N8K9 716 aa5.66□□□□□ -1.5
HTT-210ENST00000512909 HIPK4Q8NE63 616 aa5.66□□□□□ -1.5
HTT-210ENST00000512909 ERCC4Q92889 916 aaPredicted RBP5.66□□□□□ -1.5
HTT-210ENST00000512909 TOE1Q96GM8 510 aaKnown RBP5.66□□□□□ -1.5
HTT-210ENST00000512909 KCNH7Q9NS40 1196 aa5.66□□□□□ -1.5
HTT-210ENST00000512909 SLC5A4Q9NY91 659 aa5.66□□□□□ -1.5
HTT-210ENST00000512909 ASH2LQ9UBL3 628 aa5.66□□□□□ -1.5
HTT-210ENST00000512909 NOC2LQ9Y3T9 749 aaKnown RBP5.66□□□□□ -1.5
HTT-210ENST00000512909 PTPRGP23470 1445 aa5.65□□□□□ -1.5
HTT-210ENST00000512909 CLASP1Q7Z460 1538 aa5.65□□□□□ -1.5
HTT-210ENST00000512909 TRAF5O00463 557 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms