RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 MTMR10Q9NXD2 777 aa18.8■□□□□ 0.6
DDX41-213ENST00000512027 COL6A3P12111 3177 aa18.8■□□□□ 0.6
DDX41-213ENST00000512027 IGLV3-22A0A075B6J6 115 aa18.79■□□□□ 0.6
DDX41-213ENST00000512027 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.79■□□□□ 0.6
DDX41-213ENST00000512027 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.79■□□□□ 0.6
DDX41-213ENST00000512027 TREHO43280 583 aa18.79■□□□□ 0.6
DDX41-213ENST00000512027 PFKFB2O60825 505 aa18.79■□□□□ 0.6
DDX41-213ENST00000512027 DEXIO95424 95 aa18.79■□□□□ 0.6
DDX41-213ENST00000512027 CKBP12277 381 aa18.79■□□□□ 0.6
DDX41-213ENST00000512027 HOXC8P31273 242 aa18.79■□□□□ 0.6
DDX41-213ENST00000512027 PBX2P40425 430 aa18.79■□□□□ 0.6
DDX41-213ENST00000512027 PTK7Q13308 1070 aa18.79■□□□□ 0.6
DDX41-213ENST00000512027 GPNMBQ14956 572 aa18.79■□□□□ 0.6
DDX41-213ENST00000512027 ZNF697Q5TEC3 545 aa18.79■□□□□ 0.6
DDX41-213ENST00000512027 LRRC8DQ7L1W4 858 aa18.79■□□□□ 0.6
DDX41-213ENST00000512027 PLA2G4DQ86XP0 818 aa18.79■□□□□ 0.6
DDX41-213ENST00000512027 RPUSD2Q8IZ73 545 aaKnown RBP18.79■□□□□ 0.6
DDX41-213ENST00000512027 CCDC155Q8N6L0 562 aa18.79■□□□□ 0.6
DDX41-213ENST00000512027 NECAB1Q8N987 351 aa18.79■□□□□ 0.6
DDX41-213ENST00000512027 CAGE1Q8TC20 777 aa18.79■□□□□ 0.6
DDX41-213ENST00000512027 SEPT1Q8WYJ6 367 aa18.79■□□□□ 0.6
DDX41-213ENST00000512027 ATP6V0A1Q93050 837 aa18.79■□□□□ 0.6
DDX41-213ENST00000512027 IL17RAQ96F46 866 aa18.79■□□□□ 0.6
DDX41-213ENST00000512027 PCYT2Q99447 389 aa18.79■□□□□ 0.6
DDX41-213ENST00000512027 TTYH1Q9H313 450 aaPredicted RBP18.79■□□□□ 0.6
DDX41-213ENST00000512027 SLC9A2Q9UBY0 812 aa18.79■□□□□ 0.6
DDX41-213ENST00000512027 SIP14410 1827 aa18.79■□□□□ 0.6
DDX41-213ENST00000512027 MAFGO15525 162 aa18.78■□□□□ 0.6
DDX41-213ENST00000512027 EDIL3O43854 480 aa18.78■□□□□ 0.6
DDX41-213ENST00000512027 CTDNEP1O95476 244 aa18.78■□□□□ 0.6
DDX41-213ENST00000512027 SELPP16109 830 aa18.78■□□□□ 0.6
DDX41-213ENST00000512027 DNAJB2P25686 324 aa18.78■□□□□ 0.6
DDX41-213ENST00000512027 NEK4P51957 841 aa18.78■□□□□ 0.6
DDX41-213ENST00000512027 TCTN1Q2MV58 587 aa18.78■□□□□ 0.6
DDX41-213ENST00000512027 ZNF618Q5T7W0 954 aa18.78■□□□□ 0.6
DDX41-213ENST00000512027 CPLX2Q6PUV4 134 aaKnown RBP18.78■□□□□ 0.6
DDX41-213ENST00000512027 TRAF7Q6Q0C0 670 aa18.78■□□□□ 0.6
DDX41-213ENST00000512027 SERINC5Q86VE9 423 aa18.78■□□□□ 0.6
DDX41-213ENST00000512027 AFAP1L1Q8TED9 768 aa18.78■□□□□ 0.6
DDX41-213ENST00000512027 GUCD1Q96NT3 240 aa18.78■□□□□ 0.6
DDX41-213ENST00000512027 FTOQ9C0B1 505 aaKnown RBP eCLIP18.78■□□□□ 0.6
DDX41-213ENST00000512027 SH3GLB2Q9NR46 395 aa18.78■□□□□ 0.6
DDX41-213ENST00000512027 GJB4Q9NTQ9 266 aa18.78■□□□□ 0.6
DDX41-213ENST00000512027 ZNF215Q9UL58 517 aaPredicted RBP18.78■□□□□ 0.6
DDX41-213ENST00000512027 KCNJ14Q9UNX9 436 aa18.78■□□□□ 0.6
DDX41-213ENST00000512027 NFASCO94856 1347 aa18.77■□□□□ 0.6
DDX41-213ENST00000512027 NBNO60934 754 aa18.77■□□□□ 0.6
DDX41-213ENST00000512027 CCNE2O96020 404 aa18.77■□□□□ 0.6
DDX41-213ENST00000512027 CYP3A4P08684 503 aa18.77■□□□□ 0.6
DDX41-213ENST00000512027 ACTR2P61160 394 aa18.77■□□□□ 0.6
DDX41-213ENST00000512027 RBL2Q08999 1139 aa18.77■□□□□ 0.6
DDX41-213ENST00000512027 MBTPS1Q14703 1052 aa18.77■□□□□ 0.6
DDX41-213ENST00000512027 NPY5RQ15761 445 aa18.77■□□□□ 0.6
DDX41-213ENST00000512027 ME3Q16798 604 aa18.77■□□□□ 0.6
DDX41-213ENST00000512027 BICD2Q8TD16 824 aa18.77■□□□□ 0.6
DDX41-213ENST00000512027 LMBR1Q8WVP7 490 aa18.77■□□□□ 0.6
DDX41-213ENST00000512027 GLG1Q92896 1179 aa18.77■□□□□ 0.6
DDX41-213ENST00000512027 ZBTB10Q96DT7 871 aa18.77■□□□□ 0.6
DDX41-213ENST00000512027 SDF4Q9BRK5 362 aa18.77■□□□□ 0.6
DDX41-213ENST00000512027 PBX4Q9BYU1 374 aa18.77■□□□□ 0.6
DDX41-213ENST00000512027 WDR81Q562E7 1941 aa18.76■□□□□ 0.59
DDX41-213ENST00000512027 CTSHP09668 335 aa18.76■□□□□ 0.59
DDX41-213ENST00000512027 RFC2P35250 354 aa18.76■□□□□ 0.59
DDX41-213ENST00000512027 THPOP40225 353 aa18.76■□□□□ 0.59
DDX41-213ENST00000512027 RABGGTBP53611 331 aa18.76■□□□□ 0.59
DDX41-213ENST00000512027 NIPA1Q7RTP0 329 aa18.76■□□□□ 0.59
DDX41-213ENST00000512027 PCDHA4Q9UN74 947 aa18.76■□□□□ 0.59
DDX41-213ENST00000512027 EMSYQ7Z589 1322 aa18.75■□□□□ 0.59
DDX41-213ENST00000512027 DHX15O43143 795 aaKnown RBP18.75■□□□□ 0.59
DDX41-213ENST00000512027 PFKMP08237 780 aa18.75■□□□□ 0.59
DDX41-213ENST00000512027 ADAM17P78536 824 aa18.75■□□□□ 0.59
DDX41-213ENST00000512027 ANKRD1Q15327 319 aa18.75■□□□□ 0.59
DDX41-213ENST00000512027 PRR16Q569H4 304 aa18.75■□□□□ 0.59
DDX41-213ENST00000512027 BLIDQ8IZY5 108 aa18.75■□□□□ 0.59
DDX41-213ENST00000512027 ZNF577Q9BSK1 485 aa18.75■□□□□ 0.59
DDX41-213ENST00000512027 OSBPL7Q9BZF2 842 aa18.75■□□□□ 0.59
DDX41-213ENST00000512027 MTIF3Q9H2K0 278 aaKnown RBP18.75■□□□□ 0.59
DDX41-213ENST00000512027 SEMA6BQ9H3T3 888 aa18.75■□□□□ 0.59
DDX41-213ENST00000512027 SLC4A7Q9Y6M7 1214 aa18.75■□□□□ 0.59
DDX41-213ENST00000512027 STK36Q9NRP7 1315 aa18.74■□□□□ 0.59
DDX41-213ENST00000512027 M0R2N6 131 aa18.74■□□□□ 0.59
DDX41-213ENST00000512027 IPO5O00410 1097 aaKnown RBP18.74■□□□□ 0.59
DDX41-213ENST00000512027 LGR5O75473 907 aa18.74■□□□□ 0.59
DDX41-213ENST00000512027 CDKL5O76039 1030 aa18.74■□□□□ 0.59
DDX41-213ENST00000512027 MYOGP15173 224 aa18.74■□□□□ 0.59
DDX41-213ENST00000512027 IGBP1P78318 339 aa18.74■□□□□ 0.59
DDX41-213ENST00000512027 ST3GAL1Q11201 340 aa18.74■□□□□ 0.59
DDX41-213ENST00000512027 PPFIA1Q13136 1202 aa18.74■□□□□ 0.59
DDX41-213ENST00000512027 MCTP2Q6DN12 878 aa18.74■□□□□ 0.59
DDX41-213ENST00000512027 RUFY4Q6ZNE9 571 aa18.74■□□□□ 0.59
DDX41-213ENST00000512027 TBCKQ8TEA7 893 aa18.74■□□□□ 0.59
DDX41-213ENST00000512027 GTF3C6Q969F1 213 aa18.74■□□□□ 0.59
DDX41-213ENST00000512027 GJA10Q969M2 543 aa18.74■□□□□ 0.59
DDX41-213ENST00000512027 LENG9Q96B70 501 aa18.74■□□□□ 0.59
DDX41-213ENST00000512027 SMARCAD1Q9H4L7 1026 aa18.74■□□□□ 0.59
DDX41-213ENST00000512027 ERAP1Q9NZ08 941 aa18.74■□□□□ 0.59
DDX41-213ENST00000512027 YBX2Q9Y2T7 364 aaKnown RBP18.74■□□□□ 0.59
DDX41-213ENST00000512027 ACTN1P12814 892 aa18.73■□□□□ 0.59
DDX41-213ENST00000512027 FDPSP14324 419 aaKnown RBP18.73■□□□□ 0.59
DDX41-213ENST00000512027 CIITAP33076 1130 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms