RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 RPUSD2Q8IZ73 545 aaKnown RBP15.16■□□□□ 0.02
RNF4-215ENST00000511843 CCDC155Q8N6L0 562 aa15.16■□□□□ 0.02
RNF4-215ENST00000511843 GIMAP8Q8ND71 665 aaPredicted RBP15.16■□□□□ 0.02
RNF4-215ENST00000511843 CCDC12Q8WUD4 166 aaPredicted RBP15.16■□□□□ 0.02
RNF4-215ENST00000511843 ATP6V0A1Q93050 837 aa15.16■□□□□ 0.02
RNF4-215ENST00000511843 FTOQ9C0B1 505 aaKnown RBP eCLIP15.16■□□□□ 0.02
RNF4-215ENST00000511843 GLT8D2Q9H1C3 349 aa15.16■□□□□ 0.02
RNF4-215ENST00000511843 AGO4Q9HCK5 861 aaKnown RBP15.16■□□□□ 0.02
RNF4-215ENST00000511843 MICAL3Q7RTP6 2002 aa15.16■□□□□ 0.02
RNF4-215ENST00000511843 CHD9Q3L8U1 2897 aa15.15■□□□□ 0.02
RNF4-215ENST00000511843 MEIS1O00470 390 aa15.15■□□□□ 0.02
RNF4-215ENST00000511843 LARGE1O95461 756 aa15.15■□□□□ 0.02
RNF4-215ENST00000511843 SELPP16109 830 aa15.15■□□□□ 0.02
RNF4-215ENST00000511843 NLRP5P59047 1200 aa15.15■□□□□ 0.02
RNF4-215ENST00000511843 ANAPC15P60006 121 aa15.15■□□□□ 0.02
RNF4-215ENST00000511843 PTK7Q13308 1070 aa15.15■□□□□ 0.02
RNF4-215ENST00000511843 TCTN1Q2MV58 587 aa15.15■□□□□ 0.02
RNF4-215ENST00000511843 ZNF618Q5T7W0 954 aa15.15■□□□□ 0.02
RNF4-215ENST00000511843 TRAF7Q6Q0C0 670 aa15.15■□□□□ 0.02
RNF4-215ENST00000511843 PLA2G4DQ86XP0 818 aa15.15■□□□□ 0.02
RNF4-215ENST00000511843 CAGE1Q8TC20 777 aa15.15■□□□□ 0.02
RNF4-215ENST00000511843 AFAP1L1Q8TED9 768 aa15.15■□□□□ 0.02
RNF4-215ENST00000511843 CRYGNQ8WXF5 182 aa15.15■□□□□ 0.02
RNF4-215ENST00000511843 SEPT1Q8WYJ6 367 aa15.15■□□□□ 0.02
RNF4-215ENST00000511843 PBX4Q9BYU1 374 aa15.15■□□□□ 0.02
RNF4-215ENST00000511843 JPH1Q9HDC5 661 aaPredicted RBP15.15■□□□□ 0.02
RNF4-215ENST00000511843 ZNF215Q9UL58 517 aaPredicted RBP15.15■□□□□ 0.02
RNF4-215ENST00000511843 MYO9BQ13459 2157 aa15.15■□□□□ 0.02
RNF4-215ENST00000511843 EYSQ5T1H1 3165 aa15.15■□□□□ 0.02
RNF4-215ENST00000511843 EVPLQ92817 2033 aa15.14■□□□□ 0.01
RNF4-215ENST00000511843 IGLV3-22A0A075B6J6 115 aa15.14■□□□□ 0.01
RNF4-215ENST00000511843 NBNO60934 754 aa15.14■□□□□ 0.01
RNF4-215ENST00000511843 GNA11P29992 359 aa15.14■□□□□ 0.01
RNF4-215ENST00000511843 HOXC8P31273 242 aa15.14■□□□□ 0.01
RNF4-215ENST00000511843 RABGGTBP53611 331 aa15.14■□□□□ 0.01
RNF4-215ENST00000511843 RBL2Q08999 1139 aa15.14■□□□□ 0.01
RNF4-215ENST00000511843 SERINC5Q86VE9 423 aa15.14■□□□□ 0.01
RNF4-215ENST00000511843 NECAB1Q8N987 351 aa15.14■□□□□ 0.01
RNF4-215ENST00000511843 CCDC148Q8NFR7 591 aa15.14■□□□□ 0.01
RNF4-215ENST00000511843 LMBR1Q8WVP7 490 aa15.14■□□□□ 0.01
RNF4-215ENST00000511843 GLG1Q92896 1179 aa15.14■□□□□ 0.01
RNF4-215ENST00000511843 ZBTB10Q96DT7 871 aa15.14■□□□□ 0.01
RNF4-215ENST00000511843 PCYT2Q99447 389 aa15.14■□□□□ 0.01
RNF4-215ENST00000511843 SDF4Q9BRK5 362 aa15.14■□□□□ 0.01
RNF4-215ENST00000511843 SLKQ9H2G2 1235 aaPredicted RBP15.14■□□□□ 0.01
RNF4-215ENST00000511843 SEMA6BQ9H3T3 888 aa15.14■□□□□ 0.01
RNF4-215ENST00000511843 GJB4Q9NTQ9 266 aa15.14■□□□□ 0.01
RNF4-215ENST00000511843 SLC9A2Q9UBY0 812 aa15.14■□□□□ 0.01
RNF4-215ENST00000511843 SLC4A7Q9Y6M7 1214 aa15.14■□□□□ 0.01
RNF4-215ENST00000511843 MAFGO15525 162 aa15.13■□□□□ 0.01
RNF4-215ENST00000511843 DEXIO95424 95 aa15.13■□□□□ 0.01
RNF4-215ENST00000511843 CTSHP09668 335 aa15.13■□□□□ 0.01
RNF4-215ENST00000511843 MYOGP15173 224 aa15.13■□□□□ 0.01
RNF4-215ENST00000511843 RFC2P35250 354 aa15.13■□□□□ 0.01
RNF4-215ENST00000511843 THPOP40225 353 aa15.13■□□□□ 0.01
RNF4-215ENST00000511843 ACTR2P61160 394 aa15.13■□□□□ 0.01
RNF4-215ENST00000511843 MBTPS1Q14703 1052 aa15.13■□□□□ 0.01
RNF4-215ENST00000511843 TEX2Q8IWB9 1127 aa15.13■□□□□ 0.01
RNF4-215ENST00000511843 TIFAQ96CG3 184 aa15.13■□□□□ 0.01
RNF4-215ENST00000511843 OSBPL7Q9BZF2 842 aa15.13■□□□□ 0.01
RNF4-215ENST00000511843 MTIF3Q9H2K0 278 aaKnown RBP15.13■□□□□ 0.01
RNF4-215ENST00000511843 KCNJ14Q9UNX9 436 aa15.13■□□□□ 0.01
RNF4-215ENST00000511843 NFASCO94856 1347 aa15.13■□□□□ 0.01
RNF4-215ENST00000511843 CHD7Q9P2D1 2997 aa15.12■□□□□ 0.01
RNF4-215ENST00000511843 EDIL3O43854 480 aa15.12■□□□□ 0.01
RNF4-215ENST00000511843 PFKFB2O60825 505 aa15.12■□□□□ 0.01
RNF4-215ENST00000511843 CTDNEP1O95476 244 aa15.12■□□□□ 0.01
RNF4-215ENST00000511843 CCNE2O96020 404 aa15.12■□□□□ 0.01
RNF4-215ENST00000511843 PFKMP08237 780 aa15.12■□□□□ 0.01
RNF4-215ENST00000511843 CYP3A4P08684 503 aa15.12■□□□□ 0.01
RNF4-215ENST00000511843 NEK4P51957 841 aa15.12■□□□□ 0.01
RNF4-215ENST00000511843 IGBP1P78318 339 aa15.12■□□□□ 0.01
RNF4-215ENST00000511843 ADAM17P78536 824 aa15.12■□□□□ 0.01
RNF4-215ENST00000511843 NPY5RQ15761 445 aa15.12■□□□□ 0.01
RNF4-215ENST00000511843 C8orf34Q49A92 452 aa15.12■□□□□ 0.01
RNF4-215ENST00000511843 PRR16Q569H4 304 aa15.12■□□□□ 0.01
RNF4-215ENST00000511843 CPLX2Q6PUV4 134 aaKnown RBP15.12■□□□□ 0.01
RNF4-215ENST00000511843 RUFY4Q6ZNE9 571 aa15.12■□□□□ 0.01
RNF4-215ENST00000511843 TMCO2Q7Z6W1 182 aaPredicted RBP15.12■□□□□ 0.01
RNF4-215ENST00000511843 BICD2Q8TD16 824 aa15.12■□□□□ 0.01
RNF4-215ENST00000511843 MYLIPQ8WY64 445 aa15.12■□□□□ 0.01
RNF4-215ENST00000511843 CDX2Q99626 313 aaPredicted RBP15.12■□□□□ 0.01
RNF4-215ENST00000511843 NKX2-4Q9H2Z4 354 aa15.12■□□□□ 0.01
RNF4-215ENST00000511843 SH3GLB2Q9NR46 395 aa15.12■□□□□ 0.01
RNF4-215ENST00000511843 YBX2Q9Y2T7 364 aaKnown RBP15.12■□□□□ 0.01
RNF4-215ENST00000511843 CDH23Q9H251 3354 aa15.11■□□□□ 0.01
RNF4-215ENST00000511843 DHX15O43143 795 aaKnown RBP15.11■□□□□ 0.01
RNF4-215ENST00000511843 ACTN1P12814 892 aa15.11■□□□□ 0.01
RNF4-215ENST00000511843 ATP2A2P16615 1042 aaKnown RBP15.11■□□□□ 0.01
RNF4-215ENST00000511843 PPFIA1Q13136 1202 aa15.11■□□□□ 0.01
RNF4-215ENST00000511843 ME3Q16798 604 aa15.11■□□□□ 0.01
RNF4-215ENST00000511843 NIPA1Q7RTP0 329 aa15.11■□□□□ 0.01
RNF4-215ENST00000511843 TRAPPC12Q8WVT3 735 aa15.11■□□□□ 0.01
RNF4-215ENST00000511843 GJA10Q969M2 543 aa15.11■□□□□ 0.01
RNF4-215ENST00000511843 IL17RAQ96F46 866 aa15.11■□□□□ 0.01
RNF4-215ENST00000511843 SMARCAD1Q9H4L7 1026 aa15.11■□□□□ 0.01
RNF4-215ENST00000511843 ERAP1Q9NZ08 941 aa15.11■□□□□ 0.01
RNF4-215ENST00000511843 PCDHA4Q9UN74 947 aa15.11■□□□□ 0.01
RNF4-215ENST00000511843 EMSYQ7Z589 1322 aa15.11■□□□□ 0.01
RNF4-215ENST00000511843 RSPH10B2B2RC85 870 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms