RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 PSMD1Q99460 953 aa7.15□□□□□ -1.26
HMGB1P47-201ENST00000511281 KCNH7Q9NS40 1196 aa7.15□□□□□ -1.26
HMGB1P47-201ENST00000511281 USP36Q9P275 1121 aaKnown RBP7.15□□□□□ -1.26
HMGB1P47-201ENST00000511281 EBF1Q9UH73 591 aa7.15□□□□□ -1.26
HMGB1P47-201ENST00000511281 DSEQ9UL01 958 aa7.15□□□□□ -1.26
HMGB1P47-201ENST00000511281 ZNF652Q9Y2D9 606 aa7.15□□□□□ -1.26
HMGB1P47-201ENST00000511281 LOC102724159A0A0B4J2E5 919 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 KRIT1O00522 736 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 PLIN1O60240 522 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 PCDHGA12O60330 932 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 TADA3O75528 432 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 COL6A2P12110 1019 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 KRT15P19012 456 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 CD40P25942 277 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 CYP2C19P33261 490 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 GSK3AP49840 483 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 KIF11P52732 1056 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 PWP2Q15269 919 aaKnown RBP7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 EPHA7Q15375 998 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 CHRNA2Q15822 529 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 AOC3Q16853 763 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 NKAPLQ5M9Q1 402 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 ESRP1Q6NXG1 681 aaKnown RBP7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 FRMD7Q6ZUT3 714 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 ANKS4BQ8N8V4 417 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 PIP4K2CQ8TBX8 421 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 PHOSPHO1Q8TCT1 267 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 SYTL4Q96C24 671 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 C16orf92Q96LL3 132 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 ACAP3Q96P50 834 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 PCIF1Q9H4Z3 704 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 MYH16Q9H6N6 1097 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 ACSL6Q9UKU0 697 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 PCDHGA9Q9Y5G4 932 aaKnown RBP7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 PCDHGA8Q9Y5G5 932 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 PCDHGA7Q9Y5G6 932 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 PCDHGA6Q9Y5G7 932 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 PCDHGA3Q9Y5H0 932 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 PCDHGA2Q9Y5H1 932 aa7.14□□□□□ -1.27
HMGB1P47-201ENST00000511281 MAFKO60675 156 aa7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 EIF3JO75822 258 aaKnown RBP7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 KRT37O76014 449 aa7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 LTFP02788 710 aa7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 FUCA1P04066 466 aa7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 CCND1P24385 295 aa7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 KCNMA1Q12791 1236 aa7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 MINDY4Q4G0A6 757 aa7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 HSF5Q4G112 596 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 KCTD1Q719H9 257 aa7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 STK11IPQ8N1F8 1099 aa7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 MORC4Q8TE76 937 aa7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 SMOC1Q9H4F8 434 aa7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 PRDM11Q9NQV5 511 aa7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 PDLIM7Q9NR12 457 aa7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 TOMM22Q9NS69 142 aa7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 BTG4Q9NY30 223 aa7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 OBP2AQ9NY56 170 aa7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 FBLN5Q9UBX5 448 aa7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 NOB1Q9ULX3 412 aaKnown RBP7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 NOC2LQ9Y3T9 749 aaKnown RBP7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 MRFAP1Q9Y605 127 aa7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 ATP23Q9Y6H3 246 aa7.13□□□□□ -1.27
HMGB1P47-201ENST00000511281 ERC2O15083 957 aa7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 NRDCO43847 1150 aa7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 PF4V1P10720 104 aa7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 LPOP22079 712 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 RTP1P59025 263 aa7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 PURAQ00577 322 aaKnown RBP7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 MVKQ03426 396 aa7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 CHRNEQ04844 493 aa7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 HDAC1Q13547 482 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 GBX1Q14549 363 aa7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 ODF1Q14990 250 aa7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 PDCD1Q15116 288 aa7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 SEC23AQ15436 765 aa7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 GALNT18Q6P9A2 607 aa7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 PGM2L1Q6PCE3 622 aa7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 EPM2AIP1Q7L775 607 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 NME9Q86XW9 330 aa7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 SMC5Q8IY18 1101 aa7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 SAMD3Q8N6K7 520 aa7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 RC3H2Q9HBD1 1191 aaKnown RBP7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 ZNF277Q9NRM2 450 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 MKS1Q9NXB0 559 aa7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 RWDD3Q9Y3V2 267 aa7.12□□□□□ -1.27
HMGB1P47-201ENST00000511281 NOTOA8MTQ0 251 aa7.11□□□□□ -1.27
HMGB1P47-201ENST00000511281 KDM1AO60341 852 aa7.11□□□□□ -1.27
HMGB1P47-201ENST00000511281 ZRANB2O95218 330 aaKnown RBP eCLIP7.11□□□□□ -1.27
HMGB1P47-201ENST00000511281 C4BPAP04003 597 aaKnown RBP7.11□□□□□ -1.27
HMGB1P47-201ENST00000511281 CT47B1P0C2W7 299 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P47-201ENST00000511281 ADCY1Q08828 1119 aa7.11□□□□□ -1.27
HMGB1P47-201ENST00000511281 TCIRG1Q13488 830 aa7.11□□□□□ -1.27
HMGB1P47-201ENST00000511281 NR0B2Q15466 257 aa7.11□□□□□ -1.27
HMGB1P47-201ENST00000511281 RSPO4Q2I0M5 234 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P47-201ENST00000511281 PNMA8AQ86V59 439 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P47-201ENST00000511281 WFDC3Q8IUB2 231 aa7.11□□□□□ -1.27
HMGB1P47-201ENST00000511281 TPH2Q8IWU9 490 aa7.11□□□□□ -1.27
HMGB1P47-201ENST00000511281 CMIPQ8IY22 773 aa7.11□□□□□ -1.27
HMGB1P47-201ENST00000511281 AMOTL1Q8IY63 956 aa7.11□□□□□ -1.27
HMGB1P47-201ENST00000511281 NETO2Q8NC67 525 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms