RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 HMGB1P1B2RPK0 211 aaPredicted RBP10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 PPP1R11O60927 126 aaPredicted RBP10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 ZMYND10O75800 440 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 TTLL1O95922 423 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 SLC12A3P55017 1021 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 RASSF7Q02833 373 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 AP3B2Q13367 1082 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 B4GALNT4Q76KP1 1039 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 IRF2BP2Q7Z5L9 587 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 SCFD1Q8WVM8 642 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 ARHGEF1Q92888 912 aaKnown RBP10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 MKL1Q969V6 931 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 ZIM3Q96PE6 472 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 RSPH14Q9UHP6 348 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 MYH4Q9Y623 1939 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 POTEMA6NI47 508 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 ZBTB5O15062 677 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 BBOX1O75936 387 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 CYP11B2P19099 503 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 TNNC1P63316 161 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 GPSM2P81274 684 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 SLC15A2Q16348 729 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 Q4G0T1 1027 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 SLFN12Q8IYM2 578 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 TRIM34Q9BYJ4 488 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 STXBP5LQ9Y2K9 1186 aa10.15□□□□□ -0.78
PDGFRA-208ENST00000509490 NRXN2Q9P2S2 1712 aa10.15□□□□□ -0.79
PDGFRA-208ENST00000509490 CCDC188H7C350 402 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 EBAG9O00559 213 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 PDXKO00764 312 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 PALMO75781 387 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 GLI1P08151 1106 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 JAM2P57087 298 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 SPIRE1Q08AE8 756 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 NFIXQ14938 502 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 TCEAL1Q15170 157 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 TTC31Q49AM3 519 aaPredicted RBP10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 LSM14BQ9BX40 385 aaKnown RBP10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 ANKIB1Q9P2G1 1089 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 SAP30BPQ9UHR5 308 aaKnown RBP10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 ZNF646O15015 1829 aaPredicted RBP10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 ZNF233A6NK53 670 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 PLA2G4BP0C869 781 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 KLRC1P26715 233 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 ECHS1P30084 290 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 BICDL1Q6ZP65 573 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 TMEM174Q8WUU8 243 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 BBXQ8WY36 941 aaPredicted RBP10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 ARL8AQ96BM9 186 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 CRAMP1Q96RY5 1269 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 CPVLQ9H3G5 476 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 SHTN1A0MZ66 631 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 TRAF5O00463 557 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 MCCD1P59942 119 aaPredicted RBP10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 ASIC2Q16515 512 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 CCDC40Q4G0X9 1142 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 SWT1Q5T5J6 900 aaKnown RBP10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 DYMQ7RTS9 669 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 ADGRF4Q8IZF3 695 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 GLIS3Q8NEA6 775 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 CASKIN2Q8WXE0 1202 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 TAF1DQ9H5J8 278 aaPredicted RBP10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 METTL14Q9HCE5 456 aaKnown RBP10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 SUCLA2Q9P2R7 463 aaPredicted RBP10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 SYNPO2Q9UMS6 1093 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 PCDHA12Q9UN75 941 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 DIS3Q9Y2L1 958 aaKnown RBP10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 DAGLAQ9Y4D2 1042 aa10.14□□□□□ -0.79
PDGFRA-208ENST00000509490 A0A087X0T9 212 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 KDM4FA0A1W2PPD8 638 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 H0YGN5 161 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 CETN3O15182 167 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 NCK2O43639 380 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 HEXIM1O94992 359 aaKnown RBP10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 PAEPP09466 180 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 FAM228BP0C875 321 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 CIITAP33076 1130 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 ARSHQ5FYA8 562 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 CFAP58Q5T655 872 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 PACS2Q86VP3 889 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 FMNL3Q8IVF7 1028 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 DCAF4Q8WV16 495 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 ATP6V1G3Q96LB4 118 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 CCDC17Q96LX7 622 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 MRIQ9BWK5 157 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 UBA5Q9GZZ9 404 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 SLITRK6Q9H5Y7 841 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 GGA1Q9UJY5 639 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 NFS1Q9Y697 457 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 NCANO14594 1321 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 UBE4BO95155 1302 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 RBBP6Q7Z6E9 1792 aaKnown RBP10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 GNPATO15228 680 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 FSBPO95073 299 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 KIF4AO95239 1232 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 CARSP49589 748 aaKnown RBP10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 GNGT1P63211 74 aa10.13□□□□□ -0.79
PDGFRA-208ENST00000509490 DRP2Q13474 957 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms