RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 DDX41Q9UJV9 622 aaKnown RBP8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 ZMYND8Q9ULU4 1186 aaPredicted RBP8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 PCDHA6Q9UN73 950 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 PCDHA8Q9Y5H6 950 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 UBIAD1Q9Y5Z9 338 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 TRIOBPQ9H2D6 2365 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 EYSQ5T1H1 3165 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 CHD7Q9P2D1 2997 aa8.28□□□□□ -1.08
TOPBP1-207ENST00000509162 TRIM43BA6NCK2 446 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 DYNC1LI2O43237 492 aaPredicted RBP8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 MMP3P08254 477 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 C6orf222P0C671 652 aaPredicted RBP8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 ZNF286BP0CG31 522 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 MYCLP12524 364 aaPredicted RBP8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 KCNA2P16389 499 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 SYN1P17600 705 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 ICAM3P32942 547 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 SREBF1P36956 1147 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 CDK7P50613 346 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 ADCY7P51828 1080 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 NEK4P51957 841 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 PURAQ00577 322 aaKnown RBP8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 ITGB3BPQ13352 177 aaPredicted RBP8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 PPP2R5BQ15173 497 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 FSCN1Q16658 493 aaKnown RBP8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 SLC39A5Q6ZMH5 540 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 TRIM50Q86XT4 487 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 SLC43A3Q8NBI5 491 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 OR6J1Q8NGC5 347 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 SMARCC2Q8TAQ2 1214 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 SCFD2Q8WU76 684 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 AFG1LQ8WV93 481 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 TRIM43Q96BQ3 446 aaPredicted RBP8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 IWS1Q96ST2 819 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 IRX2Q9BZI1 471 aaPredicted RBP8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 ZMYND12Q9H0C1 365 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 PSTPIP2Q9H939 334 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 KCNJ14Q9UNX9 436 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 UMODL1Q5DID0 1318 aa8.27□□□□□ -1.09
TOPBP1-207ENST00000509162 SMCO2A6NFE2 343 aa8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 SPATA31C2B4DYI2 1134 aa8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 KBTBD13C9JR72 458 aa8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 FAM86B1E9PN63 330 aa8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 FAM86B2P0C5J1 330 aa8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 CCND2P30279 289 aa8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 EPHB4P54760 987 aa8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 FGD1P98174 961 aa8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 HSDL1Q3SXM5 330 aa8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 PRPF38BQ5VTL8 546 aaKnown RBP8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 JAKMIP3Q5VZ66 844 aa8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 PCNX4Q63HM2 1172 aa8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 IQSEC1Q6DN90 963 aa8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 SYNE3Q6ZMZ3 975 aa8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 CCDC83Q8IWF9 413 aa8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 FAM126BQ8IXS8 530 aa8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 SAMD3Q8N6K7 520 aa8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 DAGLBQ8NCG7 672 aa8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 CUL5Q93034 780 aa8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 WNT8BQ93098 351 aa8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 EMID1Q96A84 441 aaPredicted RBP8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 UIMC1Q96RL1 719 aa8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 MAP3K20Q9NYL2 800 aaKnown RBP8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 RTEL1Q9NZ71 1219 aa8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 TBX21Q9UL17 535 aa8.26□□□□□ -1.09
TOPBP1-207ENST00000509162 MOXD2PA6NHM9 499 aa8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 hCG_1984214I3L0E3 225 aa8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 EIF3JO75822 258 aaKnown RBP8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 GGPS1O95749 300 aa8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 CCNE2O96020 404 aa8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 F2P00734 622 aa8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 ARP10275 920 aa8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 TXNP10599 105 aaKnown RBP8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 TLE2Q04725 743 aa8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 FAAP100Q0VG06 881 aa8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 STXBP2Q15833 593 aa8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 CELF3Q5SZQ8 465 aaKnown RBP8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 C1orf53Q5VUE5 145 aa8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 RNF180Q86T96 592 aa8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 ZNF713Q8N859 430 aaPredicted RBP8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 DHX38Q92620 1227 aaKnown RBP8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 GJA10Q969M2 543 aa8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 PCYT2Q99447 389 aa8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 TSEN34Q9BSV6 310 aaKnown RBP8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 PHF20Q9BVI0 1012 aa8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 SLKQ9H2G2 1235 aaPredicted RBP8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 GDPD2Q9HCC8 539 aa8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 PKD2L1Q9P0L9 805 aa8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 ATP11BQ9Y2G3 1177 aa8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 Q9Y3F1 56 aa8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 MRVI1Q9Y6F6 885 aa8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 PTPRSQ13332 1948 aa8.25□□□□□ -1.09
TOPBP1-207ENST00000509162 SCN5AQ14524 2016 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 CCDC196A0A1B0GTZ2 297 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 KIF28PB7ZC32 967 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 HAS3O00219 553 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 DHX15O43143 795 aaKnown RBP8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 FIBPO43427 364 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 PQBP1O60828 265 aaKnown RBP8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 DEXIO95424 95 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 TDP2O95551 362 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms