RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 STAM2O75886 525 aa9.99□□□□□ -0.81
SCAMP1-202ENST00000506858 FARP2O94887 1054 aaPredicted RBP9.99□□□□□ -0.81
SCAMP1-202ENST00000506858 NCLP19338 710 aaKnown RBP9.99□□□□□ -0.81
SCAMP1-202ENST00000506858 EN2P19622 333 aaPredicted RBP9.99□□□□□ -0.81
SCAMP1-202ENST00000506858 CDC25AP30304 524 aa9.99□□□□□ -0.81
SCAMP1-202ENST00000506858 RILPL1Q5EBL4 403 aa9.99□□□□□ -0.81
SCAMP1-202ENST00000506858 UTP14CQ5TAP6 766 aaKnown RBP9.99□□□□□ -0.81
SCAMP1-202ENST00000506858 LRCH2Q5VUJ6 765 aa9.99□□□□□ -0.81
SCAMP1-202ENST00000506858 TRIM50Q86XT4 487 aa9.99□□□□□ -0.81
SCAMP1-202ENST00000506858 SLC5A5Q92911 643 aa9.99□□□□□ -0.81
SCAMP1-202ENST00000506858 FERMT2Q96AC1 680 aa9.99□□□□□ -0.81
SCAMP1-202ENST00000506858 SPATA33Q96N06 139 aa9.99□□□□□ -0.81
SCAMP1-202ENST00000506858 MTMR9Q96QG7 549 aa9.99□□□□□ -0.81
SCAMP1-202ENST00000506858 UNC45AQ9H3U1 944 aa9.99□□□□□ -0.81
SCAMP1-202ENST00000506858 ZSCAN16Q9H4T2 348 aaPredicted RBP9.99□□□□□ -0.81
SCAMP1-202ENST00000506858 KCNMB3Q9NPA1 279 aa9.99□□□□□ -0.81
SCAMP1-202ENST00000506858 PAK6Q9NQU5 681 aaPredicted RBP9.99□□□□□ -0.81
SCAMP1-202ENST00000506858 RYDENQ9NUL5 291 aaKnown RBP9.99□□□□□ -0.81
SCAMP1-202ENST00000506858 GSTTP1A0A1W2PQM5 241 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 CCDC85CA6NKD9 419 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 PP2D1A8MPX8 630 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 GAS7O60861 476 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 ADAMTS4O75173 837 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 DUSP11O75319 330 aaKnown RBP9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 PSMD10O75832 226 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 GH1P01241 217 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 TFRCP02786 760 aaKnown RBP9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 GCFC2P16383 781 aaKnown RBP9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 TECP42680 631 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 TRAPPC10P48553 1259 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 SOX10P56693 466 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 NUCB2P80303 420 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 PTPAQ15257 358 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 GNASQ5JWF2 1037 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 SPECC1Q5M775 1068 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 MOXD1Q6UVY6 613 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 NIPA1Q7RTP0 329 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 TNS4Q8IZW8 715 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 DIS3LQ8TF46 1054 aaKnown RBP9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 U2AF1L4Q8WU68 220 aaKnown RBP9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 ABHD8Q96I13 439 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 CLIC6Q96NY7 704 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 AP5M1Q9H0R1 490 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 CHMP5Q9NZZ3 219 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 NRBP1Q9UHY1 535 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 VAV3Q9UKW4 847 aa9.98□□□□□ -0.81
SCAMP1-202ENST00000506858 MYL3P08590 195 aa9.97□□□□□ -0.81
SCAMP1-202ENST00000506858 OR52Z1P0C646 297 aa9.97□□□□□ -0.81
SCAMP1-202ENST00000506858 ZNF286BP0CG31 522 aa9.97□□□□□ -0.81
SCAMP1-202ENST00000506858 TGFB3P10600 412 aa9.97□□□□□ -0.81
SCAMP1-202ENST00000506858 ACTR2P61160 394 aa9.97□□□□□ -0.81
SCAMP1-202ENST00000506858 SETQ01105 290 aaPredicted RBP9.97□□□□□ -0.81
SCAMP1-202ENST00000506858 NEDD9Q14511 834 aa9.97□□□□□ -0.81
SCAMP1-202ENST00000506858 LRRC41Q15345 812 aa9.97□□□□□ -0.81
SCAMP1-202ENST00000506858 KCNA10Q16322 511 aa9.97□□□□□ -0.81
SCAMP1-202ENST00000506858 FSCN1Q16658 493 aaKnown RBP9.97□□□□□ -0.81
SCAMP1-202ENST00000506858 NCAPH2Q6IBW4 605 aa9.97□□□□□ -0.81
SCAMP1-202ENST00000506858 METTL7BQ6UX53 244 aa9.97□□□□□ -0.81
SCAMP1-202ENST00000506858 CXCL17Q6UXB2 119 aa9.97□□□□□ -0.81
SCAMP1-202ENST00000506858 GPR20Q99678 358 aa9.97□□□□□ -0.81
SCAMP1-202ENST00000506858 SENP7Q9BQF6 1050 aa9.97□□□□□ -0.81
SCAMP1-202ENST00000506858 SDF4Q9BRK5 362 aa9.97□□□□□ -0.81
SCAMP1-202ENST00000506858 TTC12Q9H892 705 aaPredicted RBP9.97□□□□□ -0.81
SCAMP1-202ENST00000506858 JPH1Q9HDC5 661 aaPredicted RBP9.97□□□□□ -0.81
SCAMP1-202ENST00000506858 SLC9A2Q9UBY0 812 aa9.97□□□□□ -0.81
SCAMP1-202ENST00000506858 VWA3AA6NCI4 1184 aa9.96□□□□□ -0.81
SCAMP1-202ENST00000506858 SGPL1O95470 568 aa9.96□□□□□ -0.81
SCAMP1-202ENST00000506858 GJB1P08034 283 aa9.96□□□□□ -0.81
SCAMP1-202ENST00000506858 GJA9P57773 515 aa9.96□□□□□ -0.81
SCAMP1-202ENST00000506858 PSMC6P62333 389 aa9.96□□□□□ -0.81
SCAMP1-202ENST00000506858 LAMC2Q13753 1193 aa9.96□□□□□ -0.81
SCAMP1-202ENST00000506858 STK38Q15208 465 aa9.96□□□□□ -0.81
SCAMP1-202ENST00000506858 KCNV1Q6PIU1 500 aa9.96□□□□□ -0.81
SCAMP1-202ENST00000506858 USP49Q70CQ1 688 aa9.96□□□□□ -0.81
SCAMP1-202ENST00000506858 KLHDC9Q8NEP7 349 aa9.96□□□□□ -0.81
SCAMP1-202ENST00000506858 TNPO1Q92973 898 aaKnown RBP9.96□□□□□ -0.81
SCAMP1-202ENST00000506858 CDHR1Q96JP9 859 aa9.96□□□□□ -0.81
SCAMP1-202ENST00000506858 PCYT2Q99447 389 aa9.96□□□□□ -0.81
SCAMP1-202ENST00000506858 TEKT3Q9BXF9 490 aa9.96□□□□□ -0.81
SCAMP1-202ENST00000506858 RGL1Q9NZL6 768 aa9.96□□□□□ -0.81
SCAMP1-202ENST00000506858 PCDHA12Q9UN75 941 aa9.96□□□□□ -0.81
SCAMP1-202ENST00000506858 SAMM50Q9Y512 469 aa9.96□□□□□ -0.81
SCAMP1-202ENST00000506858 TMEM150BA6NC51 233 aa9.96□□□□□ -0.82
SCAMP1-202ENST00000506858 NOP56O00567 594 aaKnown RBP9.96□□□□□ -0.82
SCAMP1-202ENST00000506858 ZBTB39O15060 712 aa9.96□□□□□ -0.82
SCAMP1-202ENST00000506858 MAFGO15525 162 aa9.96□□□□□ -0.82
SCAMP1-202ENST00000506858 BAG4O95429 457 aaKnown RBP9.96□□□□□ -0.82
SCAMP1-202ENST00000506858 MMP3P08254 477 aa9.96□□□□□ -0.82
SCAMP1-202ENST00000506858 MARK3P27448 753 aa9.96□□□□□ -0.82
SCAMP1-202ENST00000506858 TCF7P36402 384 aaPredicted RBP9.96□□□□□ -0.82
SCAMP1-202ENST00000506858 ATP2C1P98194 919 aaPredicted RBP9.96□□□□□ -0.82
SCAMP1-202ENST00000506858 CYP4A11Q02928 519 aa9.96□□□□□ -0.82
SCAMP1-202ENST00000506858 SPIRE1Q08AE8 756 aa9.96□□□□□ -0.82
SCAMP1-202ENST00000506858 ZRSR1Q15695 479 aaKnown RBP9.96□□□□□ -0.82
SCAMP1-202ENST00000506858 UGCGQ16739 394 aa9.96□□□□□ -0.82
SCAMP1-202ENST00000506858 SWSAP1Q6NVH7 229 aa9.96□□□□□ -0.82
SCAMP1-202ENST00000506858 LINC00301Q8NCQ3 95 aa9.96□□□□□ -0.82
SCAMP1-202ENST00000506858 FAM20AQ96MK3 541 aa9.96□□□□□ -0.82
SCAMP1-202ENST00000506858 ZNF396Q96N95 335 aaPredicted RBP9.96□□□□□ -0.82
SCAMP1-202ENST00000506858 PLIN2Q99541 437 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms