RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 THPOP40225 353 aa16.24■□□□□ 0.19
HOXC9-202ENST00000504557 PBX2P40425 430 aa16.24■□□□□ 0.19
HOXC9-202ENST00000504557 SCRN1Q12765 414 aa16.24■□□□□ 0.19
HOXC9-202ENST00000504557 LRRC8DQ7L1W4 858 aa16.24■□□□□ 0.19
HOXC9-202ENST00000504557 CAGE1Q8TC20 777 aa16.24■□□□□ 0.19
HOXC9-202ENST00000504557 SEPT1Q8WYJ6 367 aa16.24■□□□□ 0.19
HOXC9-202ENST00000504557 HERVK_113Q902F9 699 aa16.24■□□□□ 0.19
HOXC9-202ENST00000504557 RNPEPQ9H4A4 650 aa16.24■□□□□ 0.19
HOXC9-202ENST00000504557 SLC9A2Q9UBY0 812 aa16.24■□□□□ 0.19
HOXC9-202ENST00000504557 PTPRSQ13332 1948 aa16.23■□□□□ 0.19
HOXC9-202ENST00000504557 FAM86B1E9PN63 330 aa16.23■□□□□ 0.19
HOXC9-202ENST00000504557 TREHO43280 583 aa16.23■□□□□ 0.19
HOXC9-202ENST00000504557 CTSHP09668 335 aa16.23■□□□□ 0.19
HOXC9-202ENST00000504557 FAM86B2P0C5J1 330 aa16.23■□□□□ 0.19
HOXC9-202ENST00000504557 SELPP16109 830 aa16.23■□□□□ 0.19
HOXC9-202ENST00000504557 DNAJB2P25686 324 aa16.23■□□□□ 0.19
HOXC9-202ENST00000504557 RABGGTBP53611 331 aa16.23■□□□□ 0.19
HOXC9-202ENST00000504557 ANAPC15P60006 121 aa16.23■□□□□ 0.19
HOXC9-202ENST00000504557 PTK7Q13308 1070 aa16.23■□□□□ 0.19
HOXC9-202ENST00000504557 ZNF618Q5T7W0 954 aa16.23■□□□□ 0.19
HOXC9-202ENST00000504557 NECAB1Q8N987 351 aa16.23■□□□□ 0.19
HOXC9-202ENST00000504557 BICD2Q8TD16 824 aa16.23■□□□□ 0.19
HOXC9-202ENST00000504557 AFAP1L1Q8TED9 768 aa16.23■□□□□ 0.19
HOXC9-202ENST00000504557 VWCEQ96DN2 955 aa16.23■□□□□ 0.19
HOXC9-202ENST00000504557 AGO4Q9HCK5 861 aaKnown RBP16.23■□□□□ 0.19
HOXC9-202ENST00000504557 SLC4A7Q9Y6M7 1214 aa16.23■□□□□ 0.19
HOXC9-202ENST00000504557 EVPLQ92817 2033 aa16.23■□□□□ 0.19
HOXC9-202ENST00000504557 MAFGO15525 162 aa16.22■□□□□ 0.19
HOXC9-202ENST00000504557 DEXIO95424 95 aa16.22■□□□□ 0.19
HOXC9-202ENST00000504557 ACTN1P12814 892 aa16.22■□□□□ 0.19
HOXC9-202ENST00000504557 NEK4P51957 841 aa16.22■□□□□ 0.19
HOXC9-202ENST00000504557 FOSBP53539 338 aa16.22■□□□□ 0.19
HOXC9-202ENST00000504557 IGBP1P78318 339 aa16.22■□□□□ 0.19
HOXC9-202ENST00000504557 ITGB3BPQ13352 177 aaPredicted RBP16.22■□□□□ 0.19
HOXC9-202ENST00000504557 PRR16Q569H4 304 aa16.22■□□□□ 0.19
HOXC9-202ENST00000504557 TIFAQ96CG3 184 aa16.22■□□□□ 0.19
HOXC9-202ENST00000504557 PBX4Q9BYU1 374 aa16.22■□□□□ 0.19
HOXC9-202ENST00000504557 TTYH1Q9H313 450 aaPredicted RBP16.22■□□□□ 0.19
HOXC9-202ENST00000504557 MEIS1O00470 390 aa16.21■□□□□ 0.19
HOXC9-202ENST00000504557 CDKL5O76039 1030 aa16.21■□□□□ 0.19
HOXC9-202ENST00000504557 LARGE1O95461 756 aa16.21■□□□□ 0.19
HOXC9-202ENST00000504557 PFKMP08237 780 aa16.21■□□□□ 0.19
HOXC9-202ENST00000504557 RFC2P35250 354 aa16.21■□□□□ 0.19
HOXC9-202ENST00000504557 ACTR2P61160 394 aa16.21■□□□□ 0.19
HOXC9-202ENST00000504557 PPFIA1Q13136 1202 aa16.21■□□□□ 0.19
HOXC9-202ENST00000504557 ANKRD1Q15327 319 aa16.21■□□□□ 0.19
HOXC9-202ENST00000504557 RASIP1Q5U651 963 aa16.21■□□□□ 0.19
HOXC9-202ENST00000504557 TRMT1LQ7Z2T5 733 aaKnown RBP16.21■□□□□ 0.19
HOXC9-202ENST00000504557 LMBR1Q8WVP7 490 aa16.21■□□□□ 0.19
HOXC9-202ENST00000504557 GUCD1Q96NT3 240 aa16.21■□□□□ 0.19
HOXC9-202ENST00000504557 ZNF577Q9BSK1 485 aa16.21■□□□□ 0.19
HOXC9-202ENST00000504557 SEMA6BQ9H3T3 888 aa16.21■□□□□ 0.19
HOXC9-202ENST00000504557 AZI2Q9H6S1 392 aa16.21■□□□□ 0.19
HOXC9-202ENST00000504557 ERAP1Q9NZ08 941 aa16.21■□□□□ 0.19
HOXC9-202ENST00000504557 KCNJ14Q9UNX9 436 aa16.21■□□□□ 0.19
HOXC9-202ENST00000504557 MICAL3Q7RTP6 2002 aa16.21■□□□□ 0.18
HOXC9-202ENST00000504557 SIP14410 1827 aa16.2■□□□□ 0.18
HOXC9-202ENST00000504557 BACH1O14867 736 aa16.2■□□□□ 0.18
HOXC9-202ENST00000504557 PFKFB2O60825 505 aa16.2■□□□□ 0.18
HOXC9-202ENST00000504557 EIF5BO60841 1220 aaKnown RBP16.2■□□□□ 0.18
HOXC9-202ENST00000504557 NBNO60934 754 aa16.2■□□□□ 0.18
HOXC9-202ENST00000504557 GNAT1P11488 350 aa16.2■□□□□ 0.18
HOXC9-202ENST00000504557 MYOGP15173 224 aa16.2■□□□□ 0.18
HOXC9-202ENST00000504557 ATP2A2P16615 1042 aaKnown RBP16.2■□□□□ 0.18
HOXC9-202ENST00000504557 TRIM71Q2Q1W2 868 aaKnown RBP16.2■□□□□ 0.18
HOXC9-202ENST00000504557 SERINC5Q86VE9 423 aa16.2■□□□□ 0.18
HOXC9-202ENST00000504557 TEX2Q8IWB9 1127 aa16.2■□□□□ 0.18
HOXC9-202ENST00000504557 ZBTB10Q96DT7 871 aa16.2■□□□□ 0.18
HOXC9-202ENST00000504557 NKX2-4Q9H2Z4 354 aa16.2■□□□□ 0.18
HOXC9-202ENST00000504557 SMARCAD1Q9H4L7 1026 aa16.2■□□□□ 0.18
HOXC9-202ENST00000504557 SH3GLB2Q9NR46 395 aa16.2■□□□□ 0.18
HOXC9-202ENST00000504557 TCEAL9Q9UHQ7 104 aa16.2■□□□□ 0.18
HOXC9-202ENST00000504557 MSRAQ9UJ68 235 aa16.2■□□□□ 0.18
HOXC9-202ENST00000504557 TRPC6Q9Y210 931 aa16.2■□□□□ 0.18
HOXC9-202ENST00000504557 NFASCO94856 1347 aa16.19■□□□□ 0.18
HOXC9-202ENST00000504557 IGLV3-22A0A075B6J6 115 aa16.19■□□□□ 0.18
HOXC9-202ENST00000504557 RSPH10B2B2RC85 870 aa16.19■□□□□ 0.18
HOXC9-202ENST00000504557 IPO5O00410 1097 aaKnown RBP16.19■□□□□ 0.18
HOXC9-202ENST00000504557 CYP3A4P08684 503 aa16.19■□□□□ 0.18
HOXC9-202ENST00000504557 RSPH10BP0C881 870 aa16.19■□□□□ 0.18
HOXC9-202ENST00000504557 KCNJ6P48051 423 aa16.19■□□□□ 0.18
HOXC9-202ENST00000504557 GRIK4Q16099 956 aa16.19■□□□□ 0.18
HOXC9-202ENST00000504557 MCTP2Q6DN12 878 aa16.19■□□□□ 0.18
HOXC9-202ENST00000504557 TMCO2Q7Z6W1 182 aaPredicted RBP16.19■□□□□ 0.18
HOXC9-202ENST00000504557 BLIDQ8IZY5 108 aa16.19■□□□□ 0.18
HOXC9-202ENST00000504557 MYLIPQ8WY64 445 aa16.19■□□□□ 0.18
HOXC9-202ENST00000504557 PCYT2Q99447 389 aa16.19■□□□□ 0.18
HOXC9-202ENST00000504557 CDX2Q99626 313 aaPredicted RBP16.19■□□□□ 0.18
HOXC9-202ENST00000504557 GJB4Q9NTQ9 266 aa16.19■□□□□ 0.18
HOXC9-202ENST00000504557 PCDHA4Q9UN74 947 aa16.19■□□□□ 0.18
HOXC9-202ENST00000504557 CCNE2O96020 404 aa16.18■□□□□ 0.18
HOXC9-202ENST00000504557 STAT5BP51692 787 aa16.18■□□□□ 0.18
HOXC9-202ENST00000504557 GPNMBQ14956 572 aa16.18■□□□□ 0.18
HOXC9-202ENST00000504557 ME3Q16798 604 aa16.18■□□□□ 0.18
HOXC9-202ENST00000504557 TCTN1Q2MV58 587 aa16.18■□□□□ 0.18
HOXC9-202ENST00000504557 C8orf34Q49A92 452 aa16.18■□□□□ 0.18
HOXC9-202ENST00000504557 RUFY4Q6ZNE9 571 aa16.18■□□□□ 0.18
HOXC9-202ENST00000504557 NIPA1Q7RTP0 329 aa16.18■□□□□ 0.18
HOXC9-202ENST00000504557 TBCKQ8TEA7 893 aa16.18■□□□□ 0.18
HOXC9-202ENST00000504557 TRAPPC12Q8WVT3 735 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms