RNA–Protein interactions for RNA: ENST00000502492.5

SNF8-202, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNF8, Length 2,319 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-202ENST00000502492 LSM14BQ9BX40 385 aaKnown RBP25.38■■□□□ 1.65
SNF8-202ENST00000502492 USP40Q9NVE5 1235 aa25.38■■□□□ 1.65
SNF8-202ENST00000502492 TBC1D7Q9P0N9 293 aa25.38■■□□□ 1.65
SNF8-202ENST00000502492 STIM2Q9P246 746 aa25.38■■□□□ 1.65
SNF8-202ENST00000502492 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.38■■□□□ 1.65
SNF8-202ENST00000502492 TNFRSF8P28908 595 aa25.37■■□□□ 1.65
SNF8-202ENST00000502492 USP11P51784 963 aa25.37■■□□□ 1.65
SNF8-202ENST00000502492 SMARCAL1Q9NZC9 954 aa25.37■■□□□ 1.65
SNF8-202ENST00000502492 RNF14Q9UBS8 474 aa25.37■■□□□ 1.65
SNF8-202ENST00000502492 CYP3A7-CYP3A51PA0A087WV96 503 aa25.37■■□□□ 1.65
SNF8-202ENST00000502492 FRMD3A2A2Y4 597 aa25.37■■□□□ 1.65
SNF8-202ENST00000502492 F8W031 263 aaPredicted RBP25.37■■□□□ 1.65
SNF8-202ENST00000502492 BUB1O43683 1085 aa25.37■■□□□ 1.65
SNF8-202ENST00000502492 CYP11B2P19099 503 aa25.37■■□□□ 1.65
SNF8-202ENST00000502492 CYP3A7P24462 503 aa25.37■■□□□ 1.65
SNF8-202ENST00000502492 POLR2FP61218 127 aaKnown RBP25.37■■□□□ 1.65
SNF8-202ENST00000502492 SND1Q7KZF4 910 aaKnown RBP eCLIP25.37■■□□□ 1.65
SNF8-202ENST00000502492 SRLQ86TD4 932 aa25.37■■□□□ 1.65
SNF8-202ENST00000502492 SP8Q8IXZ3 490 aa25.37■■□□□ 1.65
SNF8-202ENST00000502492 HINFPQ9BQA5 517 aa25.37■■□□□ 1.65
SNF8-202ENST00000502492 EHD2Q9NZN4 543 aa25.37■■□□□ 1.65
SNF8-202ENST00000502492 ATAD5Q96QE3 1844 aa25.37■■□□□ 1.65
SNF8-202ENST00000502492 MATR3P43243 847 aaKnown RBP eCLIP25.36■■□□□ 1.65
SNF8-202ENST00000502492 NAB2Q15742 525 aa25.36■■□□□ 1.65
SNF8-202ENST00000502492 GLE1Q53GS7 698 aaKnown RBP25.36■■□□□ 1.65
SNF8-202ENST00000502492 GPBP1Q86WP2 473 aa25.36■■□□□ 1.65
SNF8-202ENST00000502492 NELFCDQ8IXH7 590 aa25.36■■□□□ 1.65
SNF8-202ENST00000502492 MBOAT7Q96N66 472 aa25.36■■□□□ 1.65
SNF8-202ENST00000502492 LUC7LQ9NQ29 371 aaKnown RBP25.36■■□□□ 1.65
SNF8-202ENST00000502492 EMILIN3Q9NT22 766 aa25.36■■□□□ 1.65
SNF8-202ENST00000502492 FEZ2Q9UHY8 353 aaPredicted RBP25.36■■□□□ 1.65
SNF8-202ENST00000502492 LCMT1Q9UIC8 334 aa25.36■■□□□ 1.65
SNF8-202ENST00000502492 POTEB3A0JP26 581 aa25.36■■□□□ 1.65
SNF8-202ENST00000502492 POTECB2RU33 542 aa25.36■■□□□ 1.65
SNF8-202ENST00000502492 EPHB4P54760 987 aa25.36■■□□□ 1.65
SNF8-202ENST00000502492 HERC4Q5GLZ8 1057 aaPredicted RBP25.36■■□□□ 1.65
SNF8-202ENST00000502492 FOXR1Q6PIV2 292 aa25.36■■□□□ 1.65
SNF8-202ENST00000502492 POTEBQ6S5H4 581 aa25.36■■□□□ 1.65
SNF8-202ENST00000502492 CNKSR1Q969H4 720 aa25.36■■□□□ 1.65
SNF8-202ENST00000502492 AIPL1Q9NZN9 384 aa25.36■■□□□ 1.65
SNF8-202ENST00000502492 MYH4Q9Y623 1939 aa25.36■■□□□ 1.65
SNF8-202ENST00000502492 NPHP3-ACAD11A0A0J9YXS1 232 aa25.35■■□□□ 1.65
SNF8-202ENST00000502492 USP17L15C9J2P7 530 aa25.35■■□□□ 1.65
SNF8-202ENST00000502492 USP17L13C9JLJ4 530 aa25.35■■□□□ 1.65
SNF8-202ENST00000502492 USP17L11C9JVI0 530 aa25.35■■□□□ 1.65
SNF8-202ENST00000502492 USP17L18D6R9N7 530 aa25.35■■□□□ 1.65
SNF8-202ENST00000502492 USP17L22D6RA61 530 aa25.35■■□□□ 1.65
SNF8-202ENST00000502492 USP17L17D6RBQ6 530 aa25.35■■□□□ 1.65
SNF8-202ENST00000502492 USP17L19D6RCP7 530 aa25.35■■□□□ 1.65
SNF8-202ENST00000502492 USP17L20D6RJB6 530 aa25.35■■□□□ 1.65
SNF8-202ENST00000502492 SLC7A5Q01650 507 aa25.35■■□□□ 1.65
SNF8-202ENST00000502492 USP17L24Q0WX57 530 aa25.35■■□□□ 1.65
SNF8-202ENST00000502492 SLC18A3Q16572 532 aa25.35■■□□□ 1.65
SNF8-202ENST00000502492 EDRF1Q3B7T1 1238 aa25.35■■□□□ 1.65
SNF8-202ENST00000502492 EMBQ6PCB8 327 aa25.35■■□□□ 1.65
SNF8-202ENST00000502492 USP17L6PQ6QN14 398 aa25.35■■□□□ 1.65
SNF8-202ENST00000502492 RBM12Q9NTZ6 932 aaKnown RBP25.35■■□□□ 1.65
SNF8-202ENST00000502492 KIF13BQ9NQT8 1826 aa25.35■■□□□ 1.65
SNF8-202ENST00000502492 PITPNM2Q9BZ72 1349 aa25.35■■□□□ 1.65
SNF8-202ENST00000502492 MYO1CO00159 1063 aa25.35■■□□□ 1.65
SNF8-202ENST00000502492 RIMBP2O15034 1052 aa25.35■■□□□ 1.65
SNF8-202ENST00000502492 CFAP221Q4G0U5 840 aa25.35■■□□□ 1.65
SNF8-202ENST00000502492 PPP4R3CPQ6ZMV5 832 aa25.35■■□□□ 1.65
SNF8-202ENST00000502492 RRP15Q9Y3B9 282 aaKnown RBP25.35■■□□□ 1.65
SNF8-202ENST00000502492 SHOX2O60902 331 aaPredicted RBP25.34■■□□□ 1.65
SNF8-202ENST00000502492 ARSHQ5FYA8 562 aa25.34■■□□□ 1.65
SNF8-202ENST00000502492 CDC42EP5Q6NZY7 148 aa25.34■■□□□ 1.65
SNF8-202ENST00000502492 SH3GL2Q99962 352 aa25.34■■□□□ 1.65
SNF8-202ENST00000502492 MPHOSPH10O00566 681 aaKnown RBP25.34■■□□□ 1.65
SNF8-202ENST00000502492 HLA-DOAP06340 250 aa25.34■■□□□ 1.65
SNF8-202ENST00000502492 DPEP1P16444 411 aa25.34■■□□□ 1.65
SNF8-202ENST00000502492 SLC12A3P55017 1021 aa25.34■■□□□ 1.65
SNF8-202ENST00000502492 ADAM9Q13443 819 aa25.34■■□□□ 1.65
SNF8-202ENST00000502492 QRICH1Q2TAL8 776 aa25.34■■□□□ 1.65
SNF8-202ENST00000502492 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.34■■□□□ 1.65
SNF8-202ENST00000502492 TBC1D5Q92609 795 aa25.34■■□□□ 1.65
SNF8-202ENST00000502492 CAVIN3Q969G5 261 aa25.34■■□□□ 1.65
SNF8-202ENST00000502492 CCDC17Q96LX7 622 aa25.34■■□□□ 1.65
SNF8-202ENST00000502492 GANQ9H2C0 597 aa25.34■■□□□ 1.65
SNF8-202ENST00000502492 PCDHGC5Q9Y5F6 944 aa25.34■■□□□ 1.65
SNF8-202ENST00000502492 MED24O75448 989 aa25.33■■□□□ 1.65
SNF8-202ENST00000502492 NAP1L1P55209 391 aaKnown RBP25.33■■□□□ 1.65
SNF8-202ENST00000502492 TGFB2P61812 414 aa25.33■■□□□ 1.65
SNF8-202ENST00000502492 MRPS25P82663 173 aaKnown RBP25.33■■□□□ 1.65
SNF8-202ENST00000502492 APBA1Q02410 837 aa25.33■■□□□ 1.65
SNF8-202ENST00000502492 CACNB1Q02641 598 aaPredicted RBP25.33■■□□□ 1.65
SNF8-202ENST00000502492 C8orf74Q6P047 294 aa25.33■■□□□ 1.65
SNF8-202ENST00000502492 MOXD1Q6UVY6 613 aa25.33■■□□□ 1.65
SNF8-202ENST00000502492 SLFN12Q8IYM2 578 aa25.33■■□□□ 1.65
SNF8-202ENST00000502492 FAM76AQ8TAV0 307 aa25.33■■□□□ 1.65
SNF8-202ENST00000502492 ANO3Q9BYT9 981 aa25.33■■□□□ 1.65
SNF8-202ENST00000502492 EHD4Q9H223 541 aa25.33■■□□□ 1.65
SNF8-202ENST00000502492 PCDHA1Q9Y5I3 950 aa25.33■■□□□ 1.65
SNF8-202ENST00000502492 PALMO75781 387 aa25.32■■□□□ 1.64
SNF8-202ENST00000502492 KCNA3P22001 575 aa25.32■■□□□ 1.64
SNF8-202ENST00000502492 SLC20A2Q08357 652 aa25.32■■□□□ 1.64
SNF8-202ENST00000502492 HHIPL2Q6UWX4 724 aa25.32■■□□□ 1.64
SNF8-202ENST00000502492 MS4A14Q96JA4 679 aa25.32■■□□□ 1.64
SNF8-202ENST00000502492 KANSL2Q9H9L4 492 aa25.32■■□□□ 1.64
SNF8-202ENST00000502492 SPON1Q9HCB6 807 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms