RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 DACT2Q5SW24 774 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 FAM83BQ5T0W9 1011 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 MOXD1Q6UVY6 613 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 CATSPER3Q86XQ3 398 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 ZC3H3Q8IXZ2 948 aaKnown RBP10.88□□□□□ -0.67
CLIP1-204ENST00000501271 SLFN12Q8IYM2 578 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 CCDC102AQ96A19 550 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 EXOC4Q96A65 974 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 PSMB7Q99436 277 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 ZHX3Q9H4I2 956 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 QTRT2Q9H974 415 aaKnown RBP10.88□□□□□ -0.67
CLIP1-204ENST00000501271 FAM86B1E9PN63 330 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 F5H6K3 240 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 RBAK-RBAKDNI3L0D1 243 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 NCK2O43639 380 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 NDUFB10O96000 172 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 KRT18P05783 430 aaKnown RBP10.88□□□□□ -0.67
CLIP1-204ENST00000501271 FAM86B2P0C5J1 330 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 CXCR5P32302 372 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 TNNT3P45378 269 aaPredicted RBP10.88□□□□□ -0.67
CLIP1-204ENST00000501271 POLR2FP61218 127 aaKnown RBP10.88□□□□□ -0.67
CLIP1-204ENST00000501271 JAG1P78504 1218 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 KLRC3Q07444 240 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 HAUS3Q68CZ6 603 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 TXLNBQ8N3L3 684 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 ZNF622Q969S3 477 aaKnown RBP eCLIP10.88□□□□□ -0.671e-6■□□□□ 10.8
CLIP1-204ENST00000501271 GDAP1L1Q96MZ0 367 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 ALS2CR12Q96Q35 445 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 OSBPL9Q96SU4 736 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 AMNQ9BXJ7 453 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 SMARCAL1Q9NZC9 954 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 EHD2Q9NZN4 543 aa10.88□□□□□ -0.67
CLIP1-204ENST00000501271 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.88□□□□□ -0.67
CLIP1-204ENST00000501271 SLC26A4O43511 780 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 BUB1O43683 1085 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 ECE2O60344 883 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 GNA14O95837 355 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 SPATA31C1P0DKV0 1188 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 MCM3P25205 808 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 HNRNPH2P55795 449 aaKnown RBP10.87□□□□□ -0.67
CLIP1-204ENST00000501271 PABPC4Q13310 644 aaKnown RBP eCLIP10.87□□□□□ -0.67
CLIP1-204ENST00000501271 EZH2Q15910 746 aaKnown RBP10.87□□□□□ -0.67
CLIP1-204ENST00000501271 SLC9C1Q4G0N8 1177 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 STRIP1Q5VSL9 837 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 SFMBT2Q5VUG0 894 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 ARHGAP27Q6ZUM4 889 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 TMEM179Q6ZVK1 233 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 ZNF572Q7Z3I7 529 aaPredicted RBP10.87□□□□□ -0.67
CLIP1-204ENST00000501271 TRIM34Q9BYJ4 488 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 TMX4Q9H1E5 349 aaPredicted RBP10.87□□□□□ -0.67
CLIP1-204ENST00000501271 PSD3Q9NYI0 1048 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 HPCAL4Q9UM19 191 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 PITPNM2Q9BZ72 1349 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 ZC3H4Q9UPT8 1303 aaKnown RBP10.87□□□□□ -0.67
CLIP1-204ENST00000501271 OPLAHO14841 1288 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 PHACTR2O75167 634 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 SERPING1P05155 500 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 PRLRP16471 622 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 HSPA1LP34931 641 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 LMAN1P49257 510 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 ADAM9Q13443 819 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 GIT2Q14161 759 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 ABCB5Q2M3G0 1257 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 MAP9Q49MG5 647 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 Q4G0T1 1027 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 TAF3Q5VWG9 929 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 IQCEQ6IPM2 695 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 FBXO11Q86XK2 927 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 GMCL1P1Q8NEA9 526 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 FAM71BQ8TC56 605 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 HDAC7Q8WUI4 952 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 SYN2Q92777 582 aaPredicted RBP10.87□□□□□ -0.67
CLIP1-204ENST00000501271 AKT1S1Q96B36 256 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 HINFPQ9BQA5 517 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 REEP2Q9BRK0 252 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 VIPAS39Q9H9C1 493 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 HYOU1Q9Y4L1 999 aa10.87□□□□□ -0.67
CLIP1-204ENST00000501271 NR2F2P24468 414 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 RPA1P27694 616 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 HOXA13P31271 388 aaPredicted RBP10.86□□□□□ -0.67
CLIP1-204ENST00000501271 HOXD13P35453 343 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 SREBF1P36956 1147 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 IKQ13123 557 aaPredicted RBP10.86□□□□□ -0.67
CLIP1-204ENST00000501271 EDRF1Q3B7T1 1238 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 SYDE2Q5VT97 1194 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 KLHDC7AQ5VTJ3 777 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 MSL1Q68DK7 614 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 SFR1Q86XK3 245 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 MMGT1Q8N4V1 131 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 SPATA4Q8NEY3 305 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 GMCL1Q96IK5 515 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 MRIQ9BWK5 157 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 TLR10Q9BXR5 811 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 NUCKS1Q9H1E3 243 aaKnown RBP10.86□□□□□ -0.67
CLIP1-204ENST00000501271 GANQ9H2C0 597 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 RBBP6Q7Z6E9 1792 aaKnown RBP10.86□□□□□ -0.67
CLIP1-204ENST00000501271 SPDYE3A6NKU9 549 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 TBX3O15119 743 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 MSH4O15457 936 aa10.86□□□□□ -0.67
CLIP1-204ENST00000501271 SYF2O95926 243 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms