RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 DCAF8Q5TAQ9 597 aa18.07■□□□□ 0.48
COL6A1-206ENST00000498614 EMBQ6PCB8 327 aa18.07■□□□□ 0.48
COL6A1-206ENST00000498614 RBM12Q9NTZ6 932 aaKnown RBP18.07■□□□□ 0.48
COL6A1-206ENST00000498614 SHTN1A0MZ66 631 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 AKR1B10O60218 316 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 LRRC41Q15345 812 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 ECM1Q16610 540 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 DALRD3Q5D0E6 543 aaKnown RBP18.06■□□□□ 0.48
COL6A1-206ENST00000498614 ALS2CLQ60I27 953 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 CDC42EP5Q6NZY7 148 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 MMS22LQ6ZRQ5 1243 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 GLIS3Q8NEA6 775 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 DDX12PQ92771 950 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 CAVIN3Q969G5 261 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 ALS2CR12Q96Q35 445 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 MMRN2Q9H8L6 949 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 ZNF277Q9NRM2 450 aaPredicted RBP18.06■□□□□ 0.48
COL6A1-206ENST00000498614 SWAP70Q9UH65 585 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 DDX25Q9UHL0 483 aaKnown RBP18.06■□□□□ 0.48
COL6A1-206ENST00000498614 MYH4Q9Y623 1939 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 PVALEFA0A1B0GWK0 134 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 LRRC53A6NM62 1247 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 HSF2BPO75031 334 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 MAGEA1P43355 309 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 SKOR1P84550 965 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 NFIAQ12857 509 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 PDCLQ13371 301 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 PDIA5Q14554 519 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 RRAGAQ7L523 313 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 SH2D3CQ8N5H7 860 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 CUL5Q93034 780 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 MS4A14Q96JA4 679 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 ZIM3Q96PE6 472 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 TLR10Q9BXR5 811 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 FHDC1Q9C0D6 1143 aaPredicted RBP18.06■□□□□ 0.48
COL6A1-206ENST00000498614 NDST4Q9H3R1 872 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 CD2APQ9Y5K6 639 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 MYH7BA7E2Y1 1941 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 KIF13BQ9NQT8 1826 aa18.06■□□□□ 0.48
COL6A1-206ENST00000498614 MARCH6O60337 910 aa18.05■□□□□ 0.48
COL6A1-206ENST00000498614 CLK2P49760 499 aaKnown RBP18.05■□□□□ 0.48
COL6A1-206ENST00000498614 HAS1Q92839 578 aa18.05■□□□□ 0.48
COL6A1-206ENST00000498614 MTMR8Q96EF0 704 aa18.05■□□□□ 0.48
COL6A1-206ENST00000498614 RUFY1Q96T51 708 aa18.05■□□□□ 0.48
COL6A1-206ENST00000498614 SUGT1Q9Y2Z0 365 aa18.05■□□□□ 0.48
COL6A1-206ENST00000498614 PPP1R18Q6NYC8 613 aa18.05■□□□□ 0.48
COL6A1-206ENST00000498614 C8orf74Q6P047 294 aa18.05■□□□□ 0.48
COL6A1-206ENST00000498614 SUGP1Q8IWZ8 645 aaKnown RBP18.05■□□□□ 0.48
COL6A1-206ENST00000498614 ZFPM1Q8IX07 1006 aa18.05■□□□□ 0.48
COL6A1-206ENST00000498614 FAM196BA6NMK8 535 aa18.04■□□□□ 0.48
COL6A1-206ENST00000498614 BUB1O43683 1085 aa18.04■□□□□ 0.48
COL6A1-206ENST00000498614 PAFAH1B1P43034 410 aa18.04■□□□□ 0.48
COL6A1-206ENST00000498614 GFPT1Q06210 699 aaPredicted RBP18.04■□□□□ 0.48
COL6A1-206ENST00000498614 SHROOM1Q2M3G4 852 aaPredicted RBP18.04■□□□□ 0.48
COL6A1-206ENST00000498614 TMEM119Q4V9L6 283 aa18.04■□□□□ 0.48
COL6A1-206ENST00000498614 KCTD16Q68DU8 428 aa18.04■□□□□ 0.48
COL6A1-206ENST00000498614 PPP4R3AQ6IN85 833 aa18.04■□□□□ 0.48
COL6A1-206ENST00000498614 GUF1Q8N442 669 aaKnown RBP18.04■□□□□ 0.48
COL6A1-206ENST00000498614 ZBTB5O15062 677 aa18.04■□□□□ 0.48
COL6A1-206ENST00000498614 HLA-DOAP06340 250 aa18.04■□□□□ 0.48
COL6A1-206ENST00000498614 TNFRSF8P28908 595 aa18.04■□□□□ 0.48
COL6A1-206ENST00000498614 CACNB3P54284 484 aa18.04■□□□□ 0.48
COL6A1-206ENST00000498614 RASSF7Q02833 373 aa18.04■□□□□ 0.48
COL6A1-206ENST00000498614 KLHDC7AQ5VTJ3 777 aa18.04■□□□□ 0.48
COL6A1-206ENST00000498614 BAP1Q92560 729 aa18.04■□□□□ 0.48
COL6A1-206ENST00000498614 IQCDQ96DY2 449 aa18.04■□□□□ 0.48
COL6A1-206ENST00000498614 PSTPIP2Q9H939 334 aa18.04■□□□□ 0.48
COL6A1-206ENST00000498614 POLD4Q9HCU8 107 aa18.04■□□□□ 0.48
COL6A1-206ENST00000498614 MYH10P35580 1976 aa18.04■□□□□ 0.48
COL6A1-206ENST00000498614 ZSCAN5CA6NGD5 496 aaPredicted RBP18.03■□□□□ 0.48
COL6A1-206ENST00000498614 PJA2O43164 708 aa18.03■□□□□ 0.48
COL6A1-206ENST00000498614 PPIP5K2O43314 1243 aa18.03■□□□□ 0.48
COL6A1-206ENST00000498614 KRT14P02533 472 aa18.03■□□□□ 0.48
COL6A1-206ENST00000498614 GLI1P08151 1106 aa18.03■□□□□ 0.48
COL6A1-206ENST00000498614 FAM153BP0C7A2 387 aa18.03■□□□□ 0.48
COL6A1-206ENST00000498614 SLC1A4P43007 532 aa18.03■□□□□ 0.48
COL6A1-206ENST00000498614 CARSP49589 748 aaKnown RBP18.03■□□□□ 0.48
COL6A1-206ENST00000498614 ATP1A2P50993 1020 aa18.03■□□□□ 0.48
COL6A1-206ENST00000498614 MRPL12P52815 198 aaKnown RBP18.03■□□□□ 0.48
COL6A1-206ENST00000498614 IRX3P78415 501 aaPredicted RBP18.03■□□□□ 0.48
COL6A1-206ENST00000498614 FAM153CQ494X1 144 aa18.03■□□□□ 0.48
COL6A1-206ENST00000498614 GPATCH4Q5T3I0 446 aaKnown RBP18.03■□□□□ 0.48
COL6A1-206ENST00000498614 FBXW10Q5XX13 1052 aa18.03■□□□□ 0.48
COL6A1-206ENST00000498614 APOBEC3HQ6NTF7 200 aaKnown RBP18.03■□□□□ 0.48
COL6A1-206ENST00000498614 TEKT1Q969V4 418 aa18.03■□□□□ 0.48
COL6A1-206ENST00000498614 FAM153AQ9UHL3 310 aa18.03■□□□□ 0.48
COL6A1-206ENST00000498614 PCDHAC2Q9Y5I4 1007 aa18.03■□□□□ 0.48
COL6A1-206ENST00000498614 SSBP05455 408 aaKnown RBP eCLIP18.03■□□□□ 0.48
COL6A1-206ENST00000498614 MAN2A1Q16706 1144 aa18.03■□□□□ 0.48
COL6A1-206ENST00000498614 MYO3BQ8WXR4 1341 aa18.02■□□□□ 0.48
COL6A1-206ENST00000498614 ESYT3A0FGR9 886 aa18.02■□□□□ 0.48
COL6A1-206ENST00000498614 USP17L15C9J2P7 530 aa18.02■□□□□ 0.48
COL6A1-206ENST00000498614 USP17L13C9JLJ4 530 aa18.02■□□□□ 0.48
COL6A1-206ENST00000498614 USP17L11C9JVI0 530 aa18.02■□□□□ 0.48
COL6A1-206ENST00000498614 USP17L18D6R9N7 530 aa18.02■□□□□ 0.48
COL6A1-206ENST00000498614 USP17L22D6RA61 530 aa18.02■□□□□ 0.48
COL6A1-206ENST00000498614 USP17L17D6RBQ6 530 aa18.02■□□□□ 0.48
COL6A1-206ENST00000498614 USP17L19D6RCP7 530 aa18.02■□□□□ 0.48
COL6A1-206ENST00000498614 USP17L20D6RJB6 530 aa18.02■□□□□ 0.48
COL6A1-206ENST00000498614 INPP5BP32019 993 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 410.8 ms