RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 BNIP3Q12983 259 aa4.79□□□□□ -1.64
CALD1-224ENST00000498254 KIR3DS1Q14943 382 aa4.79□□□□□ -1.64
CALD1-224ENST00000498254 ODF1Q14990 250 aa4.79□□□□□ -1.64
CALD1-224ENST00000498254 TMEM132BQ14DG7 1078 aa4.79□□□□□ -1.64
CALD1-224ENST00000498254 ACAP2Q15057 778 aa4.79□□□□□ -1.64
CALD1-224ENST00000498254 TERF2Q15554 542 aa4.79□□□□□ -1.64
CALD1-224ENST00000498254 SYCP2LQ5T4T6 812 aa4.79□□□□□ -1.64
CALD1-224ENST00000498254 ANGEL2Q5VTE6 544 aaKnown RBP4.79□□□□□ -1.64
CALD1-224ENST00000498254 CEP128Q6ZU80 1094 aa4.79□□□□□ -1.64
CALD1-224ENST00000498254 OTOP3Q7RTS5 596 aa4.79□□□□□ -1.64
CALD1-224ENST00000498254 NOSTRINQ8IVI9 506 aa4.79□□□□□ -1.64
CALD1-224ENST00000498254 TCEAL8Q8IYN2 117 aa4.79□□□□□ -1.64
CALD1-224ENST00000498254 MAGEB6Q8N7X4 407 aa4.79□□□□□ -1.64
CALD1-224ENST00000498254 FAXDC2Q96IV6 333 aa4.79□□□□□ -1.64
CALD1-224ENST00000498254 MAP6Q96JE9 813 aa4.79□□□□□ -1.64
CALD1-224ENST00000498254 EPB41L1Q9H4G0 881 aa4.79□□□□□ -1.64
CALD1-224ENST00000498254 SP110Q9HB58 689 aa4.79□□□□□ -1.64
CALD1-224ENST00000498254 IMPACTQ9P2X3 320 aa4.79□□□□□ -1.64
CALD1-224ENST00000498254 EBF1Q9UH73 591 aa4.79□□□□□ -1.64
CALD1-224ENST00000498254 RIPOR2Q9Y4F9 1068 aa4.79□□□□□ -1.64
CALD1-224ENST00000498254 SPEF1Q9Y4P9 236 aa4.79□□□□□ -1.64
CALD1-224ENST00000498254 FADS2P1A8MWK0 482 aa4.78□□□□□ -1.64
CALD1-224ENST00000498254 SLC27A2O14975 620 aa4.78□□□□□ -1.64
CALD1-224ENST00000498254 PLIN1O60240 522 aa4.78□□□□□ -1.64
CALD1-224ENST00000498254 KDM1AO60341 852 aa4.78□□□□□ -1.64
CALD1-224ENST00000498254 IL33O95760 270 aa4.78□□□□□ -1.64
CALD1-224ENST00000498254 LTFP02788 710 aa4.78□□□□□ -1.64
CALD1-224ENST00000498254 TMEM253P0C7T8 217 aa4.78□□□□□ -1.64
CALD1-224ENST00000498254 LRRC32Q14392 662 aa4.78□□□□□ -1.64
CALD1-224ENST00000498254 GFOD2Q3B7J2 385 aa4.78□□□□□ -1.64
CALD1-224ENST00000498254 INAVAQ3KP66 663 aa4.78□□□□□ -1.64
CALD1-224ENST00000498254 HHIPL2Q6UWX4 724 aa4.78□□□□□ -1.64
CALD1-224ENST00000498254 AMOTL1Q8IY63 956 aa4.78□□□□□ -1.64
CALD1-224ENST00000498254 EXOC8Q8IYI6 725 aa4.78□□□□□ -1.64
CALD1-224ENST00000498254 LZTR1Q8N653 840 aa4.78□□□□□ -1.64
CALD1-224ENST00000498254 ASB11Q8WXH4 323 aa4.78□□□□□ -1.64
CALD1-224ENST00000498254 RELTQ969Z4 430 aa4.78□□□□□ -1.64
CALD1-224ENST00000498254 MPHOSPH6Q99547 160 aaKnown RBP4.78□□□□□ -1.64
CALD1-224ENST00000498254 G6PC3Q9BUM1 346 aa4.78□□□□□ -1.64
CALD1-224ENST00000498254 SLAMF8Q9P0V8 285 aa4.78□□□□□ -1.64
CALD1-224ENST00000498254 PIM2Q9P1W9 311 aa4.78□□□□□ -1.64
CALD1-224ENST00000498254 DSEQ9UL01 958 aa4.78□□□□□ -1.64
CALD1-224ENST00000498254 ZNF652Q9Y2D9 606 aa4.78□□□□□ -1.64
CALD1-224ENST00000498254 SPO11Q9Y5K1 396 aa4.78□□□□□ -1.64
CALD1-224ENST00000498254 GOLGA6CA6NDK9 693 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 GOLGA6BA6NDN3 693 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 K7ESF4 209 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 PCDHGA12O60330 932 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 RFPL1O75677 317 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 TGFB1P01137 390 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 NTRK1P04629 796 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 MYL1P05976 194 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 CLEC2LP0C7M8 214 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 MSL3P1P0C860 447 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 GOLGA6DP0CG33 693 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 LSP1P33241 339 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 RECQLP46063 649 aaPredicted RBP4.77□□□□□ -1.65
CALD1-224ENST00000498254 RTP1P59025 263 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 HTRA3P83110 453 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 SMAD3P84022 425 aaKnown RBP4.77□□□□□ -1.65
CALD1-224ENST00000498254 FAPQ12884 760 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 BIRC2Q13490 618 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 PDCD1Q15116 288 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 SEC23AQ15436 765 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 SMAD2Q15796 467 aaKnown RBP4.77□□□□□ -1.65
CALD1-224ENST00000498254 HSF5Q4G112 596 aaPredicted RBP4.77□□□□□ -1.65
CALD1-224ENST00000498254 RALGPS1Q5JS13 557 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 GORABQ5T7V8 394 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 NXNQ6DKJ4 435 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 CCSAPQ6IQ19 270 aaPredicted RBP4.77□□□□□ -1.65
CALD1-224ENST00000498254 ESRP1Q6NXG1 681 aaKnown RBP4.77□□□□□ -1.65
CALD1-224ENST00000498254 SLCO6A1Q86UG4 719 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 ZDHHC13Q8IUH4 622 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 CPA6Q8N4T0 437 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 NUP43Q8NFH3 380 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 PLEKHO2Q8TD55 490 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.77□□□□□ -1.65
CALD1-224ENST00000498254 RTF1Q92541 710 aaKnown RBP4.77□□□□□ -1.65
CALD1-224ENST00000498254 ERCC4Q92889 916 aaPredicted RBP4.77□□□□□ -1.65
CALD1-224ENST00000498254 TIFAQ96CG3 184 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 CLIP3Q96DZ5 547 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 MTA3Q9BTC8 594 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 ADAMTS10Q9H324 1103 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 ZMAT4Q9H898 229 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 RXFP1Q9HBX9 757 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 ARNT2Q9HBZ2 717 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 RIC8BQ9NVN3 520 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 GOLGA6AQ9NYA3 693 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 TNFRSF10DQ9UBN6 386 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 SRPK3Q9UPE1 567 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 INVSQ9Y283 1065 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 PCDHGA9Q9Y5G4 932 aaKnown RBP4.77□□□□□ -1.65
CALD1-224ENST00000498254 PCDHGA8Q9Y5G5 932 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 PCDHGA7Q9Y5G6 932 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 PCDHGA6Q9Y5G7 932 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 PCDHGA3Q9Y5H0 932 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 PCDHGA2Q9Y5H1 932 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 SNX11Q9Y5W9 270 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 MRFAP1Q9Y605 127 aa4.77□□□□□ -1.65
CALD1-224ENST00000498254 TAF6LQ9Y6J9 622 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms