RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 CLEC3AO75596 197 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 PPM1BO75688 479 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 SMNDC1O75940 238 aaKnown RBP eCLIP2.28□□□□□ -2.04
UBR4-217ENST00000497018 KCNH1O95259 989 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 PYGLP06737 847 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 MAPTP10636 758 aaKnown RBP2.28□□□□□ -2.04
UBR4-217ENST00000497018 ABCB4P21439 1286 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 AGXTP21549 392 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 RPS6KB1P23443 525 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 TNFSF4P23510 183 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 PEX2P28328 305 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 HOXC12P31275 282 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 ADD2P35612 726 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 TSPAN7P41732 249 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 PIK3CBP42338 1070 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 RAD52P43351 418 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 MAPK9P45984 424 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 BAG6P46379 1132 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 MTNR1BP49286 362 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 KPNA1P52294 538 aaPredicted RBP2.28□□□□□ -2.04
UBR4-217ENST00000497018 AGFG1P52594 562 aaKnown RBP2.28□□□□□ -2.04
UBR4-217ENST00000497018 GPR85P60893 370 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 PRR20EP86478 221 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 PRR20CP86479 221 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 PRR20DP86480 221 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 PRR20BP86481 221 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 PRR20AP86496 221 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 PFKPQ01813 784 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 GUCY1A3Q02108 690 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 NUCB1Q02818 461 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 IFIT5Q13325 482 aaKnown RBP2.28□□□□□ -2.04
UBR4-217ENST00000497018 PDCD1Q15116 288 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 LLGL1Q15334 1064 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 DDB1Q16531 1140 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 ZNF800Q2TB10 664 aaPredicted RBP eCLIP2.28□□□□□ -2.044e-6■■■□□ 17.2
UBR4-217ENST00000497018 C6orf118Q5T5N4 469 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 LCE2DQ5TA82 110 aaPredicted RBP2.28□□□□□ -2.04
UBR4-217ENST00000497018 ZBTB37Q5TC79 503 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 VPS53Q5VIR6 699 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 BROXQ5VW32 411 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 KIAA1614Q5VZ46 1190 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 CEP135Q66GS9 1140 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 FSTL4Q6MZW2 842 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 MRPL14Q6P1L8 145 aaKnown RBP2.28□□□□□ -2.04
UBR4-217ENST00000497018 FOXR1Q6PIV2 292 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 POMZP3Q6PJE2 187 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 RSPO2Q6UXX9 243 aaPredicted RBP2.28□□□□□ -2.04
UBR4-217ENST00000497018 CCDC149Q6ZUS6 474 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 GALNT5Q7Z7M9 940 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 TMTC1Q8IUR5 882 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 CREBRFQ8IUR6 639 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 DENND1CQ8IV53 801 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.28□□□□□ -2.04
UBR4-217ENST00000497018 C7orf61Q8IZ16 206 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 CACNA2D3Q8IZS8 1091 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 MICALL1Q8N3F8 863 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 PRR18Q8N4B5 295 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 ACRBPQ8NEB7 543 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 ADCY4Q8NFM4 1077 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 PCDH19Q8TAB3 1148 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 NPLOC4Q8TAT6 608 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.28□□□□□ -2.04
UBR4-217ENST00000497018 BAHD1Q8TBE0 780 aaPredicted RBP2.28□□□□□ -2.04
UBR4-217ENST00000497018 ADAMTS18Q8TE60 1221 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 PPP1R13LQ8WUF5 828 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 CYB5D2Q8WUJ1 264 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 SSH1Q8WYL5 1049 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 CCT6BQ92526 530 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 BHMTQ93088 406 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 PPP1R14AQ96A00 147 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 MVB12AQ96EY5 273 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 WDR89Q96FK6 387 aaPredicted RBP2.28□□□□□ -2.04
UBR4-217ENST00000497018 ACSBG1Q96GR2 724 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 TMEM169Q96HH4 297 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 ZC3H10Q96K80 434 aaKnown RBP2.28□□□□□ -2.04
UBR4-217ENST00000497018 CCDC140Q96MF4 163 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 PPP1R16BQ96T49 567 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 GAS2L1Q99501 681 aaPredicted RBP2.28□□□□□ -2.04
UBR4-217ENST00000497018 MDFIQ99750 246 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 ZFYVE21Q9BQ24 234 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 APOL5Q9BWW9 433 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 TMEM120AQ9BXJ8 343 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 UNC45AQ9H3U1 944 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 ZMAT4Q9H898 229 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 KMT5AQ9NQR1 393 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 SH3GLB2Q9NR46 395 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 OXSMQ9NWU1 459 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 CWC25Q9NXE8 425 aaPredicted RBP2.28□□□□□ -2.04
UBR4-217ENST00000497018 DNAJB12Q9NXW2 375 aaKnown RBP2.28□□□□□ -2.04
UBR4-217ENST00000497018 RTEL1Q9NZ71 1219 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 CDC23Q9UJX2 597 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 FBXO10Q9UK96 956 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 TPCN1Q9ULQ1 816 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 TRIM33Q9UPN9 1127 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 PHF24Q9UPV7 400 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 AKT3Q9Y243 479 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 FRMD4BQ9Y2L6 1034 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 LRCH1Q9Y2L9 728 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 HIF3AQ9Y2N7 669 aa2.28□□□□□ -2.04
UBR4-217ENST00000497018 CRYL1Q9Y2S2 319 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms