RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 OSBPL7Q9BZF2 842 aa25.4■■□□□ 1.66
HDDC3-203ENST00000494993 COL9A1P20849 921 aa25.39■■□□□ 1.66
HDDC3-203ENST00000494993 ARHGAP4P98171 946 aa25.39■■□□□ 1.66
HDDC3-203ENST00000494993 SP7Q8TDD2 431 aaPredicted RBP25.39■■□□□ 1.66
HDDC3-203ENST00000494993 LMBR1Q8WVP7 490 aa25.39■■□□□ 1.66
HDDC3-203ENST00000494993 ESYT1Q9BSJ8 1104 aa25.39■■□□□ 1.66
HDDC3-203ENST00000494993 PSTPIP2Q9H939 334 aa25.39■■□□□ 1.66
HDDC3-203ENST00000494993 COL4A6Q14031 1691 aa25.39■■□□□ 1.65
HDDC3-203ENST00000494993 LOXHD1Q8IVV2 1947 aa25.38■■□□□ 1.65
HDDC3-203ENST00000494993 CREB3L3Q68CJ9 461 aa25.38■■□□□ 1.65
HDDC3-203ENST00000494993 FBXO22Q8NEZ5 403 aa25.38■■□□□ 1.65
HDDC3-203ENST00000494993 CDHR1Q96JP9 859 aa25.38■■□□□ 1.65
HDDC3-203ENST00000494993 C17orf80Q9BSJ5 609 aa25.38■■□□□ 1.65
HDDC3-203ENST00000494993 NRCAMQ92823 1304 aa25.37■■□□□ 1.65
HDDC3-203ENST00000494993 ATP9AO75110 1047 aa25.37■■□□□ 1.65
HDDC3-203ENST00000494993 KCNA2P16389 499 aa25.37■■□□□ 1.65
HDDC3-203ENST00000494993 TCF7P36402 384 aaPredicted RBP25.37■■□□□ 1.65
HDDC3-203ENST00000494993 NECTIN1Q15223 517 aa25.37■■□□□ 1.65
HDDC3-203ENST00000494993 FAM26DQ5JW98 314 aa25.37■■□□□ 1.65
HDDC3-203ENST00000494993 RAB11FIP4Q86YS3 637 aa25.37■■□□□ 1.65
HDDC3-203ENST00000494993 TOP1MTQ969P6 601 aa25.37■■□□□ 1.65
HDDC3-203ENST00000494993 SLC12A7Q9Y666 1083 aa25.37■■□□□ 1.65
HDDC3-203ENST00000494993 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.36■■□□□ 1.65
HDDC3-203ENST00000494993 hCG_1642624A0A1W2PR95 340 aa25.36■■□□□ 1.65
HDDC3-203ENST00000494993 ITGB5P18084 799 aa25.36■■□□□ 1.65
HDDC3-203ENST00000494993 UBE2SQ16763 222 aa25.36■■□□□ 1.65
HDDC3-203ENST00000494993 TMTC3Q6ZXV5 915 aa25.36■■□□□ 1.65
HDDC3-203ENST00000494993 APBB2Q92870 758 aa25.36■■□□□ 1.65
HDDC3-203ENST00000494993 LRRC2Q9BYS8 371 aa25.36■■□□□ 1.65
HDDC3-203ENST00000494993 ATG2AQ2TAZ0 1938 aa25.35■■□□□ 1.65
HDDC3-203ENST00000494993 CCDC82Q8N4S0 544 aa25.35■■□□□ 1.65
HDDC3-203ENST00000494993 FANCBQ8NB91 859 aa25.35■■□□□ 1.65
HDDC3-203ENST00000494993 YME1L1Q96TA2 773 aa25.35■■□□□ 1.65
HDDC3-203ENST00000494993 ANO2Q9NQ90 1003 aa25.35■■□□□ 1.65
HDDC3-203ENST00000494993 UBIAD1Q9Y5Z9 338 aa25.35■■□□□ 1.65
HDDC3-203ENST00000494993 GSTTP1A0A1W2PQM5 241 aa25.34■■□□□ 1.65
HDDC3-203ENST00000494993 SPDYE3A6NKU9 549 aa25.34■■□□□ 1.65
HDDC3-203ENST00000494993 SGMS1Q86VZ5 419 aa25.34■■□□□ 1.65
HDDC3-203ENST00000494993 SEPT1Q8WYJ6 367 aa25.34■■□□□ 1.65
HDDC3-203ENST00000494993 SAMD11Q96NU1 681 aa25.34■■□□□ 1.65
HDDC3-203ENST00000494993 IFIH1Q9BYX4 1025 aaKnown RBP25.34■■□□□ 1.65
HDDC3-203ENST00000494993 UPP2O95045 317 aa25.33■■□□□ 1.65
HDDC3-203ENST00000494993 MTMR1Q13613 665 aa25.33■■□□□ 1.65
HDDC3-203ENST00000494993 TAF2Q6P1X5 1199 aa25.33■■□□□ 1.65
HDDC3-203ENST00000494993 RUFY4Q6ZNE9 571 aa25.33■■□□□ 1.65
HDDC3-203ENST00000494993 RPAINQ86UA6 219 aa25.33■■□□□ 1.65
HDDC3-203ENST00000494993 MICU3Q86XE3 530 aa25.33■■□□□ 1.65
HDDC3-203ENST00000494993 UBE2ZQ9H832 354 aaPredicted RBP25.33■■□□□ 1.65
HDDC3-203ENST00000494993 ERAP1Q9NZ08 941 aa25.33■■□□□ 1.65
HDDC3-203ENST00000494993 PCDHA6Q9UN73 950 aa25.33■■□□□ 1.65
HDDC3-203ENST00000494993 PCDHA8Q9Y5H6 950 aa25.33■■□□□ 1.65
HDDC3-203ENST00000494993 TTC3P53804 2025 aa25.32■■□□□ 1.64
HDDC3-203ENST00000494993 CHRNA1P02708 482 aa25.32■■□□□ 1.64
HDDC3-203ENST00000494993 PPFIA1Q13136 1202 aa25.32■■□□□ 1.64
HDDC3-203ENST00000494993 EPC2Q52LR7 807 aa25.32■■□□□ 1.64
HDDC3-203ENST00000494993 HEATR3Q7Z4Q2 680 aa25.32■■□□□ 1.64
HDDC3-203ENST00000494993 JADE2Q9NQC1 790 aa25.32■■□□□ 1.64
HDDC3-203ENST00000494993 PKD2L1Q9P0L9 805 aa25.32■■□□□ 1.64
HDDC3-203ENST00000494993 MYO7AQ13402 2215 aa25.32■■□□□ 1.64
HDDC3-203ENST00000494993 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.31■■□□□ 1.64
HDDC3-203ENST00000494993 MAFGO15525 162 aa25.31■■□□□ 1.64
HDDC3-203ENST00000494993 MARK3P27448 753 aa25.31■■□□□ 1.64
HDDC3-203ENST00000494993 GRIK4Q16099 956 aa25.31■■□□□ 1.64
HDDC3-203ENST00000494993 EHMT1Q9H9B1 1298 aa25.31■■□□□ 1.64
HDDC3-203ENST00000494993 GHRP10912 638 aa25.3■■□□□ 1.64
HDDC3-203ENST00000494993 MGAT3Q09327 533 aa25.3■■□□□ 1.64
HDDC3-203ENST00000494993 SYNE3Q6ZMZ3 975 aa25.3■■□□□ 1.64
HDDC3-203ENST00000494993 RSPH3Q86UC2 560 aa25.3■■□□□ 1.64
HDDC3-203ENST00000494993 GLG1Q92896 1179 aa25.3■■□□□ 1.64
HDDC3-203ENST00000494993 MRPL38Q96DV4 380 aaKnown RBP25.3■■□□□ 1.64
HDDC3-203ENST00000494993 C1QTNF1Q9BXJ1 281 aa25.3■■□□□ 1.64
HDDC3-203ENST00000494993 SMARCAD1Q9H4L7 1026 aa25.3■■□□□ 1.64
HDDC3-203ENST00000494993 TUBE1Q9UJT0 475 aa25.3■■□□□ 1.64
HDDC3-203ENST00000494993 CNTNAP5Q8WYK1 1306 aa25.3■■□□□ 1.64
HDDC3-203ENST00000494993 MBLAC1A4D2B0 266 aaPredicted RBP25.29■■□□□ 1.64
HDDC3-203ENST00000494993 PTPROQ16827 1216 aa25.29■■□□□ 1.64
HDDC3-203ENST00000494993 RNF20Q5VTR2 975 aa25.29■■□□□ 1.64
HDDC3-203ENST00000494993 APOA5Q6Q788 366 aa25.29■■□□□ 1.64
HDDC3-203ENST00000494993 TMEM192Q8IY95 271 aa25.29■■□□□ 1.64
HDDC3-203ENST00000494993 RAPGEFL1Q9UHV5 662 aa25.29■■□□□ 1.64
HDDC3-203ENST00000494993 H3BNC9 293 aa25.28■■□□□ 1.64
HDDC3-203ENST00000494993 GPM6BQ13491 265 aa25.28■■□□□ 1.64
HDDC3-203ENST00000494993 MARCH8Q5T0T0 291 aa25.28■■□□□ 1.64
HDDC3-203ENST00000494993 WWC2Q6AWC2 1192 aa25.28■■□□□ 1.64
HDDC3-203ENST00000494993 JPH1Q9HDC5 661 aaPredicted RBP25.28■■□□□ 1.64
HDDC3-203ENST00000494993 RBM28Q9NW13 759 aaKnown RBP25.28■■□□□ 1.64
HDDC3-203ENST00000494993 LPIN1Q14693 890 aa25.27■■□□□ 1.64
HDDC3-203ENST00000494993 LEXMQ3ZCV2 418 aa25.27■■□□□ 1.64
HDDC3-203ENST00000494993 TIGD5Q53EQ6 642 aa25.27■■□□□ 1.64
HDDC3-203ENST00000494993 BMP2KLQ5H9B9 411 aa25.27■■□□□ 1.64
HDDC3-203ENST00000494993 DNAJB3Q8WWF6 145 aa25.27■■□□□ 1.64
HDDC3-203ENST00000494993 IL17RAQ96F46 866 aa25.27■■□□□ 1.64
HDDC3-203ENST00000494993 NEK1Q96PY6 1258 aa25.27■■□□□ 1.64
HDDC3-203ENST00000494993 MXRA8Q9BRK3 442 aa25.27■■□□□ 1.64
HDDC3-203ENST00000494993 KIAA1671Q9BY89 1806 aa25.27■■□□□ 1.64
HDDC3-203ENST00000494993 KCNA5P22460 613 aa25.26■■□□□ 1.63
HDDC3-203ENST00000494993 NAPAP54920 295 aa25.26■■□□□ 1.63
HDDC3-203ENST00000494993 TYW1BQ6NUM6 668 aa25.26■■□□□ 1.63
HDDC3-203ENST00000494993 PPP1R18Q6NYC8 613 aa25.26■■□□□ 1.63
HDDC3-203ENST00000494993 TEX2Q8IWB9 1127 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms