RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 PLA2G5P39877 138 aa20.01■□□□□ 0.79
COL9A1-210ENST00000493682 LEXMQ3ZCV2 418 aa20.01■□□□□ 0.79
COL9A1-210ENST00000493682 NLRX1Q86UT6 975 aa20.01■□□□□ 0.79
COL9A1-210ENST00000493682 SAMD11Q96NU1 681 aa20.01■□□□□ 0.79
COL9A1-210ENST00000493682 LZTS2Q9BRK4 669 aa20.01■□□□□ 0.79
COL9A1-210ENST00000493682 CD320Q9NPF0 282 aa20.01■□□□□ 0.79
COL9A1-210ENST00000493682 SEC63Q9UGP8 760 aaKnown RBP20.01■□□□□ 0.79
COL9A1-210ENST00000493682 SUPT16HQ9Y5B9 1047 aaKnown RBP20.01■□□□□ 0.79
COL9A1-210ENST00000493682 PLEKHA8P1O95397 391 aa20■□□□□ 0.79
COL9A1-210ENST00000493682 PTPROQ16827 1216 aa20■□□□□ 0.79
COL9A1-210ENST00000493682 SRBD1Q8N5C6 995 aaKnown RBP20■□□□□ 0.79
COL9A1-210ENST00000493682 GIMAP8Q8ND71 665 aaPredicted RBP20■□□□□ 0.79
COL9A1-210ENST00000493682 GADD45GIP1Q8TAE8 222 aaPredicted RBP20■□□□□ 0.79
COL9A1-210ENST00000493682 APBB2Q92870 758 aa20■□□□□ 0.79
COL9A1-210ENST00000493682 MTA3Q9BTC8 594 aa20■□□□□ 0.79
COL9A1-210ENST00000493682 LRFN3Q9BTN0 628 aa20■□□□□ 0.79
COL9A1-210ENST00000493682 IFIH1Q9BYX4 1025 aaKnown RBP20■□□□□ 0.79
COL9A1-210ENST00000493682 NRCAMQ92823 1304 aa20■□□□□ 0.79
COL9A1-210ENST00000493682 H3BNC9 293 aa19.99■□□□□ 0.79
COL9A1-210ENST00000493682 PRC1O43663 620 aa19.99■□□□□ 0.79
COL9A1-210ENST00000493682 ATP9AO75110 1047 aa19.99■□□□□ 0.79
COL9A1-210ENST00000493682 CHRNA1P02708 482 aa19.99■□□□□ 0.79
COL9A1-210ENST00000493682 TCF7P36402 384 aaPredicted RBP19.99■□□□□ 0.79
COL9A1-210ENST00000493682 GNAQP50148 359 aa19.99■□□□□ 0.79
COL9A1-210ENST00000493682 CASC1Q6TDU7 716 aa19.99■□□□□ 0.79
COL9A1-210ENST00000493682 TMEM192Q8IY95 271 aa19.99■□□□□ 0.79
COL9A1-210ENST00000493682 PSTPIP2Q9H939 334 aa19.99■□□□□ 0.79
COL9A1-210ENST00000493682 COL4A6Q14031 1691 aa19.99■□□□□ 0.79
COL9A1-210ENST00000493682 BRWD1Q9NSI6 2320 aa19.99■□□□□ 0.79
COL9A1-210ENST00000493682 KCNA2P16389 499 aa19.98■□□□□ 0.79
COL9A1-210ENST00000493682 ITGB5P18084 799 aa19.98■□□□□ 0.79
COL9A1-210ENST00000493682 GPM6BQ13491 265 aa19.98■□□□□ 0.79
COL9A1-210ENST00000493682 TMEM31Q5JXX7 168 aa19.98■□□□□ 0.79
COL9A1-210ENST00000493682 NFXL1Q6ZNB6 911 aa19.98■□□□□ 0.79
COL9A1-210ENST00000493682 RUFY4Q6ZNE9 571 aa19.98■□□□□ 0.79
COL9A1-210ENST00000493682 RPAINQ86UA6 219 aa19.98■□□□□ 0.79
COL9A1-210ENST00000493682 CMTR1Q8N1G2 835 aaKnown RBP19.98■□□□□ 0.79
COL9A1-210ENST00000493682 GPRASP2Q96D09 838 aa19.98■□□□□ 0.79
COL9A1-210ENST00000493682 FAM122AQ96E09 287 aa19.98■□□□□ 0.79
COL9A1-210ENST00000493682 GSTTP1A0A1W2PQM5 241 aa19.97■□□□□ 0.79
COL9A1-210ENST00000493682 SH2B2O14492 632 aaPredicted RBP19.97■□□□□ 0.79
COL9A1-210ENST00000493682 MCM5P33992 734 aa19.97■□□□□ 0.79
COL9A1-210ENST00000493682 COL9A3Q14050 684 aaPredicted RBP19.97■□□□□ 0.79
COL9A1-210ENST00000493682 TIGD5Q53EQ6 642 aa19.97■□□□□ 0.79
COL9A1-210ENST00000493682 TAF2Q6P1X5 1199 aa19.97■□□□□ 0.79
COL9A1-210ENST00000493682 FAM178BQ8IXR5 827 aa19.97■□□□□ 0.79
COL9A1-210ENST00000493682 TMTC2Q8N394 836 aa19.97■□□□□ 0.79
COL9A1-210ENST00000493682 BANK1Q8NDB2 785 aa19.97■□□□□ 0.79
COL9A1-210ENST00000493682 CDHR1Q96JP9 859 aa19.97■□□□□ 0.79
COL9A1-210ENST00000493682 TMEM87BQ96K49 555 aa19.97■□□□□ 0.79
COL9A1-210ENST00000493682 C11orf16Q9NQ32 467 aa19.97■□□□□ 0.79
COL9A1-210ENST00000493682 CCDC69A6NI79 296 aa19.96■□□□□ 0.79
COL9A1-210ENST00000493682 PI4K2BG5E9Z4 385 aa19.96■□□□□ 0.79
COL9A1-210ENST00000493682 GHRP10912 638 aa19.96■□□□□ 0.79
COL9A1-210ENST00000493682 RXRAP19793 462 aa19.96■□□□□ 0.79
COL9A1-210ENST00000493682 PPFIA1Q13136 1202 aa19.96■□□□□ 0.79
COL9A1-210ENST00000493682 PTCRAQ6ISU1 281 aaPredicted RBP19.96■□□□□ 0.79
COL9A1-210ENST00000493682 SEPT1Q8WYJ6 367 aa19.96■□□□□ 0.79
COL9A1-210ENST00000493682 IL17RAQ96F46 866 aa19.96■□□□□ 0.79
COL9A1-210ENST00000493682 EHMT1Q9H9B1 1298 aa19.96■□□□□ 0.79
COL9A1-210ENST00000493682 ERAP1Q9NZ08 941 aa19.96■□□□□ 0.79
COL9A1-210ENST00000493682 UBIAD1Q9Y5Z9 338 aa19.96■□□□□ 0.79
COL9A1-210ENST00000493682 hCG_1642624A0A1W2PR95 340 aa19.95■□□□□ 0.78
COL9A1-210ENST00000493682 GPR37L1O60883 481 aa19.95■□□□□ 0.78
COL9A1-210ENST00000493682 CALM1P0DP23 149 aa19.95■□□□□ 0.78
COL9A1-210ENST00000493682 CALM2P0DP24 149 aa19.95■□□□□ 0.78
COL9A1-210ENST00000493682 CALM3P0DP25 149 aa19.95■□□□□ 0.78
COL9A1-210ENST00000493682 IL9P15248 144 aa19.95■□□□□ 0.78
COL9A1-210ENST00000493682 MARK3P27448 753 aa19.95■□□□□ 0.78
COL9A1-210ENST00000493682 MGAT3Q09327 533 aa19.95■□□□□ 0.78
COL9A1-210ENST00000493682 MTMR1Q13613 665 aa19.95■□□□□ 0.78
COL9A1-210ENST00000493682 LPIN1Q14693 890 aa19.95■□□□□ 0.78
COL9A1-210ENST00000493682 GRIK4Q16099 956 aa19.95■□□□□ 0.78
COL9A1-210ENST00000493682 UBE2SQ16763 222 aa19.95■□□□□ 0.78
COL9A1-210ENST00000493682 TCEAL5Q5H9L2 206 aa19.95■□□□□ 0.78
COL9A1-210ENST00000493682 GJD3Q8N144 294 aa19.95■□□□□ 0.78
COL9A1-210ENST00000493682 NEK9Q8TD19 979 aa19.95■□□□□ 0.78
COL9A1-210ENST00000493682 LSG1Q9H089 658 aaKnown RBP19.95■□□□□ 0.78
COL9A1-210ENST00000493682 PKD2L1Q9P0L9 805 aa19.95■□□□□ 0.78
COL9A1-210ENST00000493682 MBLAC1A4D2B0 266 aaPredicted RBP19.94■□□□□ 0.78
COL9A1-210ENST00000493682 FAM86C2PA6NEL3 165 aa19.94■□□□□ 0.78
COL9A1-210ENST00000493682 GRXCR2A6NFK2 248 aa19.94■□□□□ 0.78
COL9A1-210ENST00000493682 H3BQ06 376 aaPredicted RBP19.94■□□□□ 0.78
COL9A1-210ENST00000493682 LIFRP42702 1097 aa19.94■□□□□ 0.78
COL9A1-210ENST00000493682 MARCH8Q5T0T0 291 aa19.94■□□□□ 0.78
COL9A1-210ENST00000493682 RSPH3Q86UC2 560 aa19.94■□□□□ 0.78
COL9A1-210ENST00000493682 RAB11FIP4Q86YS3 637 aa19.94■□□□□ 0.78
COL9A1-210ENST00000493682 FIBCD1Q8N539 461 aa19.94■□□□□ 0.78
COL9A1-210ENST00000493682 GLG1Q92896 1179 aa19.94■□□□□ 0.78
COL9A1-210ENST00000493682 SMARCAD1Q9H4L7 1026 aa19.94■□□□□ 0.78
COL9A1-210ENST00000493682 TUBE1Q9UJT0 475 aa19.94■□□□□ 0.78
COL9A1-210ENST00000493682 HCN4Q9Y3Q4 1203 aa19.94■□□□□ 0.78
COL9A1-210ENST00000493682 SPDYE3A6NKU9 549 aa19.93■□□□□ 0.78
COL9A1-210ENST00000493682 SLC27A2O14975 620 aa19.93■□□□□ 0.78
COL9A1-210ENST00000493682 LINC00271P0C7V0 271 aa19.93■□□□□ 0.78
COL9A1-210ENST00000493682 CTNNB1P35222 781 aa19.93■□□□□ 0.78
COL9A1-210ENST00000493682 COL19A1Q14993 1142 aa19.93■□□□□ 0.78
COL9A1-210ENST00000493682 PUS10Q3MIT2 529 aaKnown RBP19.93■□□□□ 0.78
COL9A1-210ENST00000493682 CCDC82Q8N4S0 544 aa19.93■□□□□ 0.78
COL9A1-210ENST00000493682 DNAJB3Q8WWF6 145 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms