RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 SMAD2Q15796 467 aaKnown RBP12.72□□□□□ -0.37
SND1-215ENST00000492772 CTC1Q2NKJ3 1217 aa12.72□□□□□ -0.37
SND1-215ENST00000492772 TAF2Q6P1X5 1199 aa12.72□□□□□ -0.37
SND1-215ENST00000492772 TRIM50Q86XT4 487 aa12.72□□□□□ -0.37
SND1-215ENST00000492772 SMC5Q8IY18 1101 aa12.72□□□□□ -0.37
SND1-215ENST00000492772 CLP1Q92989 425 aaKnown RBP12.72□□□□□ -0.37
SND1-215ENST00000492772 ZFP91Q96JP5 570 aaPredicted RBP12.72□□□□□ -0.37
SND1-215ENST00000492772 OSBPL7Q9BZF2 842 aa12.72□□□□□ -0.37
SND1-215ENST00000492772 RC3H2Q9HBD1 1191 aaKnown RBP12.72□□□□□ -0.37
SND1-215ENST00000492772 ZNF318Q5VUA4 2279 aa12.72□□□□□ -0.37
SND1-215ENST00000492772 KIAA1671Q9BY89 1806 aa12.72□□□□□ -0.37
SND1-215ENST00000492772 MMP1P03956 469 aa12.71□□□□□ -0.37
SND1-215ENST00000492772 LINC00271P0C7V0 271 aa12.71□□□□□ -0.37
SND1-215ENST00000492772 IRS1P35568 1242 aa12.71□□□□□ -0.37
SND1-215ENST00000492772 TRDNQ13061 729 aa12.71□□□□□ -0.37
SND1-215ENST00000492772 SEMA3FQ13275 785 aa12.71□□□□□ -0.37
SND1-215ENST00000492772 UTP14CQ5TAP6 766 aaKnown RBP12.71□□□□□ -0.37
SND1-215ENST00000492772 XRRA1Q6P2D8 792 aa12.71□□□□□ -0.37
SND1-215ENST00000492772 RSPH3Q86UC2 560 aa12.71□□□□□ -0.37
SND1-215ENST00000492772 CHD1LQ86WJ1 897 aa12.71□□□□□ -0.37
SND1-215ENST00000492772 PLEKHM2Q8IWE5 1019 aa12.71□□□□□ -0.37
SND1-215ENST00000492772 GIMAP8Q8ND71 665 aaPredicted RBP12.71□□□□□ -0.37
SND1-215ENST00000492772 PPP2R3CQ969Q6 453 aa12.71□□□□□ -0.37
SND1-215ENST00000492772 MFSD14AQ96MC6 490 aa12.71□□□□□ -0.37
SND1-215ENST00000492772 FBXL18Q96ME1 805 aa12.71□□□□□ -0.37
SND1-215ENST00000492772 SENP7Q9BQF6 1050 aa12.71□□□□□ -0.37
SND1-215ENST00000492772 PLVAPQ9BX97 442 aa12.71□□□□□ -0.37
SND1-215ENST00000492772 BCAS3Q9H6U6 928 aa12.71□□□□□ -0.37
SND1-215ENST00000492772 WDFY4Q6ZS81 3184 aa12.7□□□□□ -0.38
SND1-215ENST00000492772 ERICH2A1L162 156 aa12.7□□□□□ -0.38
SND1-215ENST00000492772 GRM6O15303 877 aa12.7□□□□□ -0.38
SND1-215ENST00000492772 MBTPS2O43462 519 aa12.7□□□□□ -0.38
SND1-215ENST00000492772 CHRNA1P02708 482 aa12.7□□□□□ -0.38
SND1-215ENST00000492772 RPLP2P05387 115 aaKnown RBP12.7□□□□□ -0.38
SND1-215ENST00000492772 GHRP10912 638 aa12.7□□□□□ -0.38
SND1-215ENST00000492772 HYAL1Q12794 435 aa12.7□□□□□ -0.38
SND1-215ENST00000492772 BTG3Q14201 252 aaPredicted RBP12.7□□□□□ -0.38
SND1-215ENST00000492772 SLC35G1Q2M3R5 365 aa12.7□□□□□ -0.38
SND1-215ENST00000492772 HERC4Q5GLZ8 1057 aaPredicted RBP12.7□□□□□ -0.38
SND1-215ENST00000492772 PCNX4Q63HM2 1172 aa12.7□□□□□ -0.38
SND1-215ENST00000492772 HFE2Q6ZVN8 426 aa12.7□□□□□ -0.38
SND1-215ENST00000492772 CYB5R4Q7L1T6 521 aa12.7□□□□□ -0.38
SND1-215ENST00000492772 NLRX1Q86UT6 975 aa12.7□□□□□ -0.38
SND1-215ENST00000492772 RWDD1Q9H446 243 aaPredicted RBP12.7□□□□□ -0.38
SND1-215ENST00000492772 EHMT1Q9H9B1 1298 aa12.7□□□□□ -0.38
SND1-215ENST00000492772 CD207Q9UJ71 328 aa12.7□□□□□ -0.38
SND1-215ENST00000492772 C5orf42Q9H799 3197 aa12.7□□□□□ -0.38
SND1-215ENST00000492772 TRIOO75962 3097 aa12.7□□□□□ -0.38
SND1-215ENST00000492772 TTC3P53804 2025 aa12.69□□□□□ -0.38
SND1-215ENST00000492772 BAZ2BQ9UIF8 2168 aaKnown RBP12.69□□□□□ -0.38
SND1-215ENST00000492772 CYTH3O43739 400 aa12.69□□□□□ -0.38
SND1-215ENST00000492772 TBX10O75333 385 aa12.69□□□□□ -0.38
SND1-215ENST00000492772 SP4Q02446 784 aa12.69□□□□□ -0.38
SND1-215ENST00000492772 NUCB1Q02818 461 aa12.69□□□□□ -0.38
SND1-215ENST00000492772 MGAT3Q09327 533 aa12.69□□□□□ -0.38
SND1-215ENST00000492772 PPFIA1Q13136 1202 aa12.69□□□□□ -0.38
SND1-215ENST00000492772 LPIN1Q14693 890 aa12.69□□□□□ -0.38
SND1-215ENST00000492772 SART3Q15020 963 aaKnown RBP12.69□□□□□ -0.38
SND1-215ENST00000492772 CLUL1Q15846 466 aa12.69□□□□□ -0.38
SND1-215ENST00000492772 B4GALNT3Q6L9W6 998 aa12.69□□□□□ -0.38
SND1-215ENST00000492772 TSHZ1Q6ZSZ6 1077 aa12.69□□□□□ -0.38
SND1-215ENST00000492772 SMARCC2Q8TAQ2 1214 aa12.69□□□□□ -0.38
SND1-215ENST00000492772 CUL5Q93034 780 aa12.69□□□□□ -0.38
SND1-215ENST00000492772 P2RX5Q93086 422 aa12.69□□□□□ -0.38
SND1-215ENST00000492772 ZNF689Q96CS4 500 aaPredicted RBP12.69□□□□□ -0.38
SND1-215ENST00000492772 RTEL1Q9NZ71 1219 aa12.69□□□□□ -0.38
SND1-215ENST00000492772 MUTYHQ9UIF7 546 aa12.69□□□□□ -0.38
SND1-215ENST00000492772 TUBE1Q9UJT0 475 aa12.69□□□□□ -0.38
SND1-215ENST00000492772 MYO7AQ13402 2215 aa12.68□□□□□ -0.38
SND1-215ENST00000492772 STXBP3O00186 592 aa12.68□□□□□ -0.38
SND1-215ENST00000492772 IFIT3O14879 490 aaKnown RBP12.68□□□□□ -0.38
SND1-215ENST00000492772 TCF7P36402 384 aaPredicted RBP12.68□□□□□ -0.38
SND1-215ENST00000492772 DLX2Q07687 328 aaPredicted RBP12.68□□□□□ -0.38
SND1-215ENST00000492772 TROAPQ12815 778 aa12.68□□□□□ -0.38
SND1-215ENST00000492772 WTAPQ15007 396 aa12.68□□□□□ -0.38
SND1-215ENST00000492772 NAALADL2Q58DX5 795 aa12.68□□□□□ -0.38
SND1-215ENST00000492772 FBXO47Q5MNV8 452 aa12.68□□□□□ -0.38
SND1-215ENST00000492772 RUFY4Q6ZNE9 571 aa12.68□□□□□ -0.38
SND1-215ENST00000492772 RNF135Q8IUD6 432 aa12.68□□□□□ -0.38
SND1-215ENST00000492772 GPRASP2Q96D09 838 aa12.68□□□□□ -0.38
SND1-215ENST00000492772 CDHR1Q96JP9 859 aa12.68□□□□□ -0.38
SND1-215ENST00000492772 ERAP1Q9NZ08 941 aa12.68□□□□□ -0.38
SND1-215ENST00000492772 MBLAC1A4D2B0 266 aaPredicted RBP12.67□□□□□ -0.38
SND1-215ENST00000492772 PIK3CDO00329 1044 aa12.67□□□□□ -0.38
SND1-215ENST00000492772 ENPP3O14638 875 aa12.67□□□□□ -0.38
SND1-215ENST00000492772 DGKIO75912 1065 aa12.67□□□□□ -0.38
SND1-215ENST00000492772 NDUFV1P49821 464 aa12.67□□□□□ -0.38
SND1-215ENST00000492772 ADAM15Q13444 863 aa12.67□□□□□ -0.38
SND1-215ENST00000492772 GRIK4Q16099 956 aa12.67□□□□□ -0.38
SND1-215ENST00000492772 CATIPQ7Z7H3 387 aa12.67□□□□□ -0.38
SND1-215ENST00000492772 RALYLQ86SE5 291 aaKnown RBP12.67□□□□□ -0.38
SND1-215ENST00000492772 CMTR2Q8IYT2 770 aaKnown RBP12.67□□□□□ -0.38
SND1-215ENST00000492772 EDAQ92838 391 aa12.67□□□□□ -0.38
SND1-215ENST00000492772 FTHL17Q9BXU8 183 aa12.67□□□□□ -0.38
SND1-215ENST00000492772 IGFLR1Q9H665 355 aa12.67□□□□□ -0.38
SND1-215ENST00000492772 SUPT16HQ9Y5B9 1047 aaKnown RBP12.67□□□□□ -0.38
SND1-215ENST00000492772 U3KPZ7 1027 aaPredicted RBP12.67□□□□□ -0.38
SND1-215ENST00000492772 LINC01565O15544 149 aa12.66□□□□□ -0.38
SND1-215ENST00000492772 EYA4O95677 639 aa12.66□□□□□ -0.38
SND1-215ENST00000492772 GTF2F1P35269 517 aaKnown RBP eCLIP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms