RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 PTK7Q13308 1070 aa10.5□□□□□ -0.73
SUPT20H-220ENST00000490716 MFSD10Q14728 455 aa10.5□□□□□ -0.73
SUPT20H-220ENST00000490716 SLC26A6Q9BXS9 759 aa10.5□□□□□ -0.73
SUPT20H-220ENST00000490716 EHMT1Q9H9B1 1298 aa10.5□□□□□ -0.73
SUPT20H-220ENST00000490716 RBAK-RBAKDNI3L0D1 243 aa10.5□□□□□ -0.73
SUPT20H-220ENST00000490716 MTMR1Q13613 665 aa10.5□□□□□ -0.73
SUPT20H-220ENST00000490716 CYFIP1Q7L576 1253 aa10.5□□□□□ -0.73
SUPT20H-220ENST00000490716 FCHSD1Q86WN1 690 aa10.5□□□□□ -0.73
SUPT20H-220ENST00000490716 TDHQ8IZJ6 230 aa10.5□□□□□ -0.73
SUPT20H-220ENST00000490716 BLIDQ8IZY5 108 aa10.5□□□□□ -0.73
SUPT20H-220ENST00000490716 RASGRP4Q8TDF6 673 aa10.5□□□□□ -0.73
SUPT20H-220ENST00000490716 GLT1D1Q96MS3 346 aa10.5□□□□□ -0.73
SUPT20H-220ENST00000490716 TTC3P53804 2025 aa10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 SLC37A4O43826 429 aa10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 CAND2O75155 1236 aa10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 ZNF286BP0CG31 522 aa10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 SSRP1Q08945 709 aaKnown RBP10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 PPP2R5CQ13362 524 aa10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 SYNE3Q6ZMZ3 975 aa10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 NECAB1Q8N987 351 aa10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 IGKV6-21A0A0C4DH24 114 aa10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 NBNO60934 754 aa10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 IQCF3P0C7M6 154 aa10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 SETQ01105 290 aaPredicted RBP10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 CHRDL2Q6WN34 429 aa10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 REXO1Q8N1G1 1221 aaKnown RBP10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 CDHR1Q96JP9 859 aa10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 AP5M1Q9H0R1 490 aa10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 HDAC6Q9UBN7 1215 aa10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 MORC2Q9Y6X9 1032 aaPredicted RBP10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 FAM205CA6NFA0 338 aa10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 ZEB2O60315 1214 aa10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 SYN1P17600 705 aa10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 ATN1P54259 1190 aaPredicted RBP10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 PIBF1Q8WXW3 757 aa10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 SPATA33Q96N06 139 aa10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 RTEL1Q9NZ71 1219 aa10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 KDM3AQ9Y4C1 1321 aa10.49□□□□□ -0.73
SUPT20H-220ENST00000490716 SMIM10L2AP0DMW4 78 aa10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 SMIM10L2BP0DMW5 78 aa10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 GNA11P29992 359 aa10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 RFC2P35250 354 aa10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 TOB1P50616 345 aaPredicted RBP10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 NEK4P51957 841 aa10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 RABEP1Q15276 862 aa10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 SHHQ15465 462 aa10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 WRAP73Q9P2S5 460 aaPredicted RBP10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 MRVI1Q9Y6F6 885 aa10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 COL1A2P08123 1366 aa10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 KIF28PB7ZC32 967 aa10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 PLCB4Q15147 1175 aa10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 ZNF746Q6NUN9 644 aaPredicted RBP10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 CCDC148Q8NFR7 591 aa10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 DPF3Q92784 378 aa10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 RIT2Q99578 217 aa10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 C6orf50Q9HD87 102 aa10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 ZMYND8Q9ULU4 1186 aaPredicted RBP10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 NR2E3Q9Y5X4 410 aa10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 ANK1P16157 1881 aa10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 ZNF862O60290 1169 aa10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 CKBP12277 381 aa10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 MYCLP12524 364 aaPredicted RBP10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 ZNF200P98182 395 aaPredicted RBP10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 GNPTABQ3T906 1256 aa10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 BICD2Q8TD16 824 aa10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 CCDC12Q8WUD4 166 aaPredicted RBP10.48□□□□□ -0.73
SUPT20H-220ENST00000490716 DTNBO60941 627 aa10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 TCF7P36402 384 aaPredicted RBP10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 ACTR2P61160 394 aa10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 SMAD3P84022 425 aaKnown RBP10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 KIAA0753Q2KHM9 967 aa10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 CCDC60Q8IWA6 550 aaPredicted RBP10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 DHX37Q8IY37 1157 aaKnown RBP10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 IL23AQ9NPF7 189 aa10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 SH2B1Q9NRF2 756 aaPredicted RBP10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 ATP11BQ9Y2G3 1177 aa10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 TBX3O15119 743 aa10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 RUFY4Q6ZNE9 571 aa10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 NLRX1Q86UT6 975 aa10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 CAGE1Q8TC20 777 aa10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 TBCKQ8TEA7 893 aa10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 LMBR1Q8WVP7 490 aa10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 JPH1Q9HDC5 661 aaPredicted RBP10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 KCNJ14Q9UNX9 436 aa10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 H3BRB1 525 aa10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 DHX16O60231 1041 aaKnown RBP10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 TDP2O95551 362 aa10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 CHRNA1P02708 482 aa10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 UGCGQ16739 394 aa10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.47□□□□□ -0.734e-7■■■■□ 21.2
SUPT20H-220ENST00000490716 KATNAL1Q9BW62 490 aa10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 NIFKQ9BYG3 293 aaKnown RBP10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 SLKQ9H2G2 1235 aaPredicted RBP10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 TUT1Q9H6E5 874 aaKnown RBP10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 SLC9A2Q9UBY0 812 aa10.47□□□□□ -0.73
SUPT20H-220ENST00000490716 SUPT20HL2P0C7V6 817 aa10.46□□□□□ -0.73
SUPT20H-220ENST00000490716 ECM1Q16610 540 aa10.46□□□□□ -0.73
SUPT20H-220ENST00000490716 TRIM50Q86XT4 487 aa10.46□□□□□ -0.73
SUPT20H-220ENST00000490716 FBXO18Q8NFZ0 1043 aa10.46□□□□□ -0.73
SUPT20H-220ENST00000490716 ZSCAN31Q96LW9 406 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms