RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 RAB11FIP4Q86YS3 637 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 CMTR1Q8N1G2 835 aaKnown RBP12.92□□□□□ -0.34
DUBR-204ENST00000490441 CCDC82Q8N4S0 544 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 ADAMTS19Q8TE59 1207 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 GPRASP2Q96D09 838 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 RAD9AQ99638 391 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 LRRC2Q9BYS8 371 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 RNPEPQ9H4A4 650 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 BCAS3Q9H6U6 928 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 EHMT1Q9H9B1 1298 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 KAT6AQ92794 2004 aa12.91□□□□□ -0.34
DUBR-204ENST00000490441 hCG_1642624A0A1W2PR95 340 aa12.91□□□□□ -0.34
DUBR-204ENST00000490441 LCHNA4D1U4 455 aa12.91□□□□□ -0.34
DUBR-204ENST00000490441 CTSHP09668 335 aa12.91□□□□□ -0.34
DUBR-204ENST00000490441 HOXC8P31273 242 aa12.91□□□□□ -0.34
DUBR-204ENST00000490441 ARHGAP4P98171 946 aa12.91□□□□□ -0.34
DUBR-204ENST00000490441 TMTC3Q6ZXV5 915 aa12.91□□□□□ -0.34
DUBR-204ENST00000490441 TRIM50Q86XT4 487 aa12.91□□□□□ -0.34
DUBR-204ENST00000490441 MYOCDQ8IZQ8 938 aa12.91□□□□□ -0.34
DUBR-204ENST00000490441 FANCBQ8NB91 859 aa12.91□□□□□ -0.34
DUBR-204ENST00000490441 DBF4BQ8NFT6 615 aa12.91□□□□□ -0.34
DUBR-204ENST00000490441 SEPT8Q92599 483 aa12.91□□□□□ -0.34
DUBR-204ENST00000490441 TGS1Q96RS0 853 aaKnown RBP12.91□□□□□ -0.34
DUBR-204ENST00000490441 UHRF1Q96T88 793 aaPredicted RBP12.91□□□□□ -0.34
DUBR-204ENST00000490441 SETD4Q9NVD3 440 aa12.91□□□□□ -0.34
DUBR-204ENST00000490441 MTUS1Q9ULD2 1270 aa12.91□□□□□ -0.34
DUBR-204ENST00000490441 PCDHB8Q9UN66 801 aa12.91□□□□□ -0.34
DUBR-204ENST00000490441 PCDHB13Q9Y5F0 798 aa12.91□□□□□ -0.34
DUBR-204ENST00000490441 SPTBN5Q9NRC6 3674 aaKnown RBP12.91□□□□□ -0.34
DUBR-204ENST00000490441 GRB10Q13322 594 aa12.9□□□□□ -0.34
DUBR-204ENST00000490441 MTMR1Q13613 665 aa12.9□□□□□ -0.34
DUBR-204ENST00000490441 UBE2SQ16763 222 aa12.9□□□□□ -0.34
DUBR-204ENST00000490441 TCTN1Q2MV58 587 aa12.9□□□□□ -0.34
DUBR-204ENST00000490441 CENPQQ7L2Z9 268 aaPredicted RBP12.9□□□□□ -0.34
DUBR-204ENST00000490441 SGMS1Q86VZ5 419 aa12.9□□□□□ -0.34
DUBR-204ENST00000490441 ZNF579Q8NAF0 562 aaKnown RBP12.9□□□□□ -0.34
DUBR-204ENST00000490441 NEK1Q96PY6 1258 aa12.9□□□□□ -0.34
DUBR-204ENST00000490441 RBM28Q9NW13 759 aaKnown RBP12.9□□□□□ -0.34
DUBR-204ENST00000490441 COG5Q9UP83 839 aa12.9□□□□□ -0.34
DUBR-204ENST00000490441 INSL6Q9Y581 213 aa12.9□□□□□ -0.34
DUBR-204ENST00000490441 DOCK5Q9H7D0 1870 aa12.9□□□□□ -0.34
DUBR-204ENST00000490441 BRWD1Q9NSI6 2320 aa12.9□□□□□ -0.34
DUBR-204ENST00000490441 PTPRSQ13332 1948 aa12.9□□□□□ -0.35
DUBR-204ENST00000490441 NRCAMQ92823 1304 aa12.89□□□□□ -0.35
DUBR-204ENST00000490441 TCF7P36402 384 aaPredicted RBP12.89□□□□□ -0.35
DUBR-204ENST00000490441 PLEKHG4Q58EX7 1191 aa12.89□□□□□ -0.35
DUBR-204ENST00000490441 KRT40Q6A162 431 aa12.89□□□□□ -0.35
DUBR-204ENST00000490441 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.89□□□□□ -0.35
DUBR-204ENST00000490441 GDPD5Q8WTR4 605 aa12.89□□□□□ -0.35
DUBR-204ENST00000490441 LMBR1Q8WVP7 490 aa12.89□□□□□ -0.35
DUBR-204ENST00000490441 SEPT1Q8WYJ6 367 aa12.89□□□□□ -0.35
DUBR-204ENST00000490441 GLG1Q92896 1179 aa12.89□□□□□ -0.35
DUBR-204ENST00000490441 PKD2L1Q9P0L9 805 aa12.89□□□□□ -0.35
DUBR-204ENST00000490441 PCDHA6Q9UN73 950 aa12.89□□□□□ -0.35
DUBR-204ENST00000490441 PCDHA8Q9Y5H6 950 aa12.89□□□□□ -0.35
DUBR-204ENST00000490441 MICAL3Q7RTP6 2002 aa12.89□□□□□ -0.35
DUBR-204ENST00000490441 TRANK1O15050 2925 aa12.89□□□□□ -0.35
DUBR-204ENST00000490441 LINC01553A4QN01 128 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 MAFGO15525 162 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 ZBTB43O43298 467 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 KCNA2P16389 499 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 ITGB5P18084 799 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 MARK3P27448 753 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 NAPAP54920 295 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 ERVK-21P61565 698 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 FGD1P98174 961 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 TFF2Q03403 129 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 PPFIA1Q13136 1202 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 COL9A3Q14050 684 aaPredicted RBP12.88□□□□□ -0.35
DUBR-204ENST00000490441 KRT32Q14532 448 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 RTN1Q16799 776 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 PPP1R18Q6NYC8 613 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 TAF2Q6P1X5 1199 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 APOA5Q6Q788 366 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 DHX32Q7L7V1 743 aaKnown RBP12.88□□□□□ -0.35
DUBR-204ENST00000490441 SPRED2Q7Z698 418 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 RSPH3Q86UC2 560 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 APBB2Q92870 758 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 YME1L1Q96TA2 773 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 ERAP1Q9NZ08 941 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 LMCD1Q9NZU5 365 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 UBIAD1Q9Y5Z9 338 aa12.88□□□□□ -0.35
DUBR-204ENST00000490441 GOLGA8AA7E2F4 631 aa12.87□□□□□ -0.35
DUBR-204ENST00000490441 GOLGA8BA8MQT2 603 aa12.87□□□□□ -0.35
DUBR-204ENST00000490441 LPXNO60711 386 aa12.87□□□□□ -0.35
DUBR-204ENST00000490441 ATP9AO75110 1047 aa12.87□□□□□ -0.35
DUBR-204ENST00000490441 CDC45O75419 566 aa12.87□□□□□ -0.35
DUBR-204ENST00000490441 WWC2Q6AWC2 1192 aa12.87□□□□□ -0.35
DUBR-204ENST00000490441 TEX2Q8IWB9 1127 aa12.87□□□□□ -0.35
DUBR-204ENST00000490441 FBXO22Q8NEZ5 403 aa12.87□□□□□ -0.35
DUBR-204ENST00000490441 HLA-CQ95604 372 aa12.87□□□□□ -0.35
DUBR-204ENST00000490441 TCEANC2Q96MN5 208 aa12.87□□□□□ -0.35
DUBR-204ENST00000490441 SDF4Q9BRK5 362 aa12.87□□□□□ -0.35
DUBR-204ENST00000490441 IFIH1Q9BYX4 1025 aaKnown RBP12.87□□□□□ -0.35
DUBR-204ENST00000490441 SMARCAD1Q9H4L7 1026 aa12.87□□□□□ -0.35
DUBR-204ENST00000490441 AZI2Q9H6S1 392 aa12.87□□□□□ -0.35
DUBR-204ENST00000490441 SUGCTQ9HAC7 445 aa12.87□□□□□ -0.35
DUBR-204ENST00000490441 JPH1Q9HDC5 661 aaPredicted RBP12.87□□□□□ -0.35
DUBR-204ENST00000490441 JADE2Q9NQC1 790 aa12.87□□□□□ -0.35
DUBR-204ENST00000490441 NAP1L2Q9ULW6 460 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms