RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 NSUN3Q9H649 340 aaKnown RBP19.59■□□□□ 0.73
TOP3B-217ENST00000489581 ZNF215Q9UL58 517 aaPredicted RBP19.59■□□□□ 0.73
TOP3B-217ENST00000489581 TTC3P53804 2025 aa19.59■□□□□ 0.73
TOP3B-217ENST00000489581 CHRNA1P02708 482 aa19.58■□□□□ 0.72
TOP3B-217ENST00000489581 ALADP13716 330 aa19.58■□□□□ 0.72
TOP3B-217ENST00000489581 CTNNB1P35222 781 aa19.58■□□□□ 0.72
TOP3B-217ENST00000489581 USP17L6PQ6QN14 398 aa19.58■□□□□ 0.72
TOP3B-217ENST00000489581 FIBCD1Q8N539 461 aa19.58■□□□□ 0.72
TOP3B-217ENST00000489581 EXOC6Q8TAG9 804 aa19.58■□□□□ 0.72
TOP3B-217ENST00000489581 SMARCC2Q8TAQ2 1214 aa19.58■□□□□ 0.72
TOP3B-217ENST00000489581 IL17RAQ96F46 866 aa19.58■□□□□ 0.72
TOP3B-217ENST00000489581 CLDND1Q9NY35 253 aa19.58■□□□□ 0.72
TOP3B-217ENST00000489581 TAF6LQ9Y6J9 622 aa19.58■□□□□ 0.72
TOP3B-217ENST00000489581 U3KPZ7 1027 aaPredicted RBP19.58■□□□□ 0.72
TOP3B-217ENST00000489581 GHRP10912 638 aa19.57■□□□□ 0.72
TOP3B-217ENST00000489581 RUFY4Q6ZNE9 571 aa19.57■□□□□ 0.72
TOP3B-217ENST00000489581 RALYLQ86SE5 291 aaKnown RBP19.57■□□□□ 0.72
TOP3B-217ENST00000489581 LOXHD1Q8IVV2 1947 aa19.57■□□□□ 0.72
TOP3B-217ENST00000489581 NRCAMQ92823 1304 aa19.56■□□□□ 0.72
TOP3B-217ENST00000489581 COL4A6Q14031 1691 aa19.56■□□□□ 0.72
TOP3B-217ENST00000489581 E7EWF7 191 aa19.56■□□□□ 0.72
TOP3B-217ENST00000489581 GSPT1P15170 499 aaKnown RBP19.56■□□□□ 0.72
TOP3B-217ENST00000489581 SART3Q15020 963 aaKnown RBP19.56■□□□□ 0.72
TOP3B-217ENST00000489581 PCNX4Q63HM2 1172 aa19.56■□□□□ 0.72
TOP3B-217ENST00000489581 CATIPQ7Z7H3 387 aa19.56■□□□□ 0.72
TOP3B-217ENST00000489581 NCOA7Q8NI08 942 aa19.56■□□□□ 0.72
TOP3B-217ENST00000489581 CUL5Q93034 780 aa19.56■□□□□ 0.72
TOP3B-217ENST00000489581 SENP7Q9BQF6 1050 aa19.56■□□□□ 0.72
TOP3B-217ENST00000489581 C5orf42Q9H799 3197 aa19.55■□□□□ 0.72
TOP3B-217ENST00000489581 GRM6O15303 877 aa19.55■□□□□ 0.72
TOP3B-217ENST00000489581 BMPR1AP36894 532 aa19.55■□□□□ 0.72
TOP3B-217ENST00000489581 COL19A1Q14993 1142 aa19.55■□□□□ 0.72
TOP3B-217ENST00000489581 CSPP1Q1MSJ5 1256 aa19.55■□□□□ 0.72
TOP3B-217ENST00000489581 RPAINQ86UA6 219 aa19.55■□□□□ 0.72
TOP3B-217ENST00000489581 IGDCC4Q8TDY8 1250 aa19.55■□□□□ 0.72
TOP3B-217ENST00000489581 MYL10Q9BUA6 226 aa19.55■□□□□ 0.72
TOP3B-217ENST00000489581 FAM50BQ9Y247 325 aa19.55■□□□□ 0.72
TOP3B-217ENST00000489581 C5orf67F2Z3F1 127 aa19.54■□□□□ 0.72
TOP3B-217ENST00000489581 MEIS2O14770 477 aa19.54■□□□□ 0.72
TOP3B-217ENST00000489581 DCXO43602 365 aa19.54■□□□□ 0.72
TOP3B-217ENST00000489581 CSPG5O95196 566 aa19.54■□□□□ 0.72
TOP3B-217ENST00000489581 LINC00271P0C7V0 271 aa19.54■□□□□ 0.72
TOP3B-217ENST00000489581 MARK3P27448 753 aa19.54■□□□□ 0.72
TOP3B-217ENST00000489581 PDE4AP27815 886 aa19.54■□□□□ 0.72
TOP3B-217ENST00000489581 TCF7P36402 384 aaPredicted RBP19.54■□□□□ 0.72
TOP3B-217ENST00000489581 LTBRP36941 435 aa19.54■□□□□ 0.72
TOP3B-217ENST00000489581 ANTXR2P58335 489 aa19.54■□□□□ 0.72
TOP3B-217ENST00000489581 ZP2Q05996 745 aa19.54■□□□□ 0.72
TOP3B-217ENST00000489581 LPIN1Q14693 890 aa19.54■□□□□ 0.72
TOP3B-217ENST00000489581 TTC22Q5TAA0 569 aa19.54■□□□□ 0.72
TOP3B-217ENST00000489581 NLRX1Q86UT6 975 aa19.54■□□□□ 0.72
TOP3B-217ENST00000489581 RUFY2Q8WXA3 655 aa19.54■□□□□ 0.72
TOP3B-217ENST00000489581 RRP36Q96EU6 259 aaKnown RBP19.54■□□□□ 0.72
TOP3B-217ENST00000489581 EHMT1Q9H9B1 1298 aa19.54■□□□□ 0.72
TOP3B-217ENST00000489581 POTEB3A0JP26 581 aa19.53■□□□□ 0.72
TOP3B-217ENST00000489581 ENPP3O14638 875 aa19.53■□□□□ 0.72
TOP3B-217ENST00000489581 ATP9AO75110 1047 aa19.53■□□□□ 0.72
TOP3B-217ENST00000489581 RB1P06400 928 aa19.53■□□□□ 0.72
TOP3B-217ENST00000489581 MGAT3Q09327 533 aa19.53■□□□□ 0.72
TOP3B-217ENST00000489581 PPFIA1Q13136 1202 aa19.53■□□□□ 0.72
TOP3B-217ENST00000489581 CLUL1Q15846 466 aa19.53■□□□□ 0.72
TOP3B-217ENST00000489581 TAF2Q6P1X5 1199 aa19.53■□□□□ 0.72
TOP3B-217ENST00000489581 XRRA1Q6P2D8 792 aa19.53■□□□□ 0.72
TOP3B-217ENST00000489581 POTEBQ6S5H4 581 aa19.53■□□□□ 0.72
TOP3B-217ENST00000489581 ALYREFQ86V81 257 aaKnown RBP19.53■□□□□ 0.72
TOP3B-217ENST00000489581 GIMAP8Q8ND71 665 aaPredicted RBP19.53■□□□□ 0.72
TOP3B-217ENST00000489581 DNAJB3Q8WWF6 145 aa19.53■□□□□ 0.72
TOP3B-217ENST00000489581 C11orf84Q9BUA3 381 aaPredicted RBP19.53■□□□□ 0.72
TOP3B-217ENST00000489581 ADGRA3Q8IWK6 1321 aa19.52■□□□□ 0.72
TOP3B-217ENST00000489581 GSTTP1A0A1W2PQM5 241 aa19.52■□□□□ 0.72
TOP3B-217ENST00000489581 PIK3CDO00329 1044 aa19.52■□□□□ 0.72
TOP3B-217ENST00000489581 NCK2O43639 380 aa19.52■□□□□ 0.72
TOP3B-217ENST00000489581 CHMLP26374 656 aa19.52■□□□□ 0.72
TOP3B-217ENST00000489581 DLX2Q07687 328 aaPredicted RBP19.52■□□□□ 0.72
TOP3B-217ENST00000489581 HYAL1Q12794 435 aa19.52■□□□□ 0.72
TOP3B-217ENST00000489581 GRIK4Q16099 956 aa19.52■□□□□ 0.72
TOP3B-217ENST00000489581 RSPH3Q86UC2 560 aa19.52■□□□□ 0.72
TOP3B-217ENST00000489581 ADHFE1Q8IWW8 467 aa19.52■□□□□ 0.72
TOP3B-217ENST00000489581 ZNF654Q8IZM8 581 aa19.52■□□□□ 0.72
TOP3B-217ENST00000489581 CTCFLQ8NI51 663 aaPredicted RBP19.52■□□□□ 0.72
TOP3B-217ENST00000489581 SEPT1Q8WYJ6 367 aa19.52■□□□□ 0.72
TOP3B-217ENST00000489581 SPZ1Q9BXG8 430 aa19.52■□□□□ 0.72
TOP3B-217ENST00000489581 LMAN2LQ9H0V9 348 aa19.52■□□□□ 0.72
TOP3B-217ENST00000489581 RC3H2Q9HBD1 1191 aaKnown RBP19.52■□□□□ 0.72
TOP3B-217ENST00000489581 PKD2L1Q9P0L9 805 aa19.52■□□□□ 0.72
TOP3B-217ENST00000489581 PRKAG3Q9UGI9 489 aa19.52■□□□□ 0.72
TOP3B-217ENST00000489581 TUBE1Q9UJT0 475 aa19.52■□□□□ 0.72
TOP3B-217ENST00000489581 RWDD3Q9Y3V2 267 aa19.52■□□□□ 0.72
TOP3B-217ENST00000489581 C19orf67A6NJJ6 358 aa19.51■□□□□ 0.71
TOP3B-217ENST00000489581 KCNA2P16389 499 aa19.51■□□□□ 0.71
TOP3B-217ENST00000489581 GTF2F1P35269 517 aaKnown RBP eCLIP19.51■□□□□ 0.71
TOP3B-217ENST00000489581 BTG3Q14201 252 aaPredicted RBP19.51■□□□□ 0.71
TOP3B-217ENST00000489581 CTC1Q2NKJ3 1217 aa19.51■□□□□ 0.71
TOP3B-217ENST00000489581 FBXO47Q5MNV8 452 aa19.51■□□□□ 0.71
TOP3B-217ENST00000489581 MB21D2Q8IYB1 491 aaPredicted RBP19.51■□□□□ 0.71
TOP3B-217ENST00000489581 GLG1Q92896 1179 aa19.51■□□□□ 0.71
TOP3B-217ENST00000489581 CLP1Q92989 425 aaKnown RBP19.51■□□□□ 0.71
TOP3B-217ENST00000489581 GPRASP2Q96D09 838 aa19.51■□□□□ 0.71
TOP3B-217ENST00000489581 IGFLR1Q9H665 355 aa19.51■□□□□ 0.71
TOP3B-217ENST00000489581 LY9Q9HBG7 655 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms