RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 RBL2Q08999 1139 aa12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 PTK7Q13308 1070 aa12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 AP3B2Q13367 1082 aa12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 MTMR1Q13613 665 aa12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 LARP1BQ659C4 914 aaKnown RBP12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 KRT40Q6A162 431 aa12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 OTOP2Q7RTS6 562 aa12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 CCDC12Q8WUD4 166 aaPredicted RBP12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 CTAGE1Q96RT6 745 aa12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 GPR20Q99678 358 aa12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 PHF20Q9BVI0 1012 aa12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 SEMA6BQ9H3T3 888 aa12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 TUT1Q9H6E5 874 aaKnown RBP12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 VPS54Q9P1Q0 977 aa12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 UBIAD1Q9Y5Z9 338 aa12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 KIF28PB7ZC32 967 aa12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 M0R2N6 131 aa12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 STX6O43752 255 aa12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 SELPP16109 830 aa12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 ITGB5P18084 799 aa12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 AKAP17AQ02040 695 aaKnown RBP12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 GUCY1B3Q02153 619 aa12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 RAB30Q15771 203 aa12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 MCTP2Q6DN12 878 aa12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 DEFB128Q7Z7B8 93 aa12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 FAM184AQ8NB25 1140 aa12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 WASF1Q92558 559 aa12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 TNFRSF25Q93038 417 aa12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 TIFAQ96CG3 184 aa12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 VWCEQ96DN2 955 aa12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 C8orf76Q96K31 380 aa12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 FAM161BQ96MY7 647 aa12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 GUCD1Q96NT3 240 aa12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 BCAS3Q9H6U6 928 aa12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 JADE2Q9NQC1 790 aa12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 SH3GLB2Q9NR46 395 aa12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 ZNF215Q9UL58 517 aaPredicted RBP12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 CIZ1Q9ULV3 898 aaPredicted RBP12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 KCNJ14Q9UNX9 436 aa12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 SLC4A7Q9Y6M7 1214 aa12.01□□□□□ -0.49
SCAMP4-208ENST00000489554 MYH15Q9Y2K3 1946 aa12□□□□□ -0.49
SCAMP4-208ENST00000489554 ESYT2A0FGR8 921 aa12□□□□□ -0.49
SCAMP4-208ENST00000489554 C17orf102A2RUQ5 167 aa12□□□□□ -0.49
SCAMP4-208ENST00000489554 ZBBXA8MT70 800 aa12□□□□□ -0.49
SCAMP4-208ENST00000489554 MMP1P03956 469 aa12□□□□□ -0.49
SCAMP4-208ENST00000489554 GNAT1P11488 350 aa12□□□□□ -0.49
SCAMP4-208ENST00000489554 KCNA2P16389 499 aa12□□□□□ -0.49
SCAMP4-208ENST00000489554 CLK2P49760 499 aaKnown RBP12□□□□□ -0.49
SCAMP4-208ENST00000489554 RESTQ13127 1097 aa12□□□□□ -0.49
SCAMP4-208ENST00000489554 LRRC8DQ7L1W4 858 aa12□□□□□ -0.49
SCAMP4-208ENST00000489554 OXER1Q8TDS5 423 aa12□□□□□ -0.49
SCAMP4-208ENST00000489554 DHX38Q92620 1227 aaKnown RBP12□□□□□ -0.49
SCAMP4-208ENST00000489554 MXRA8Q9BRK3 442 aa12□□□□□ -0.49
SCAMP4-208ENST00000489554 ANO3Q9BYT9 981 aa12□□□□□ -0.49
SCAMP4-208ENST00000489554 PBX4Q9BYU1 374 aa12□□□□□ -0.49
SCAMP4-208ENST00000489554 FTOQ9C0B1 505 aaKnown RBP eCLIP12□□□□□ -0.49
SCAMP4-208ENST00000489554 ZMYND12Q9H0C1 365 aa12□□□□□ -0.49
SCAMP4-208ENST00000489554 TTYH1Q9H313 450 aaPredicted RBP12□□□□□ -0.49
SCAMP4-208ENST00000489554 CXXC1Q9P0U4 656 aaPredicted RBP12□□□□□ -0.49
SCAMP4-208ENST00000489554 MSRAQ9UJ68 235 aa12□□□□□ -0.49
SCAMP4-208ENST00000489554 GRXCR1A8MXD5 290 aa11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 ATP9AO75110 1047 aa11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 BAIAP3O94812 1187 aa11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 SMIM10L2AP0DMW4 78 aa11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 SMIM10L2BP0DMW5 78 aa11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 CKBP12277 381 aa11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 PDCP20941 246 aa11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 GNA11P29992 359 aa11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 HOXC8P31273 242 aa11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 TCF7P36402 384 aaPredicted RBP11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 SREBF1P36956 1147 aa11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 SP4Q02446 784 aa11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 CEP55Q53EZ4 464 aa11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 UTP14CQ5TAP6 766 aaKnown RBP11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 SERINC5Q86VE9 423 aa11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 FAM177A1Q8N128 213 aaPredicted RBP11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 DAGLBQ8NCG7 672 aa11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 CCDC148Q8NFR7 591 aa11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 SEPT1Q8WYJ6 367 aa11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 CDX2Q99626 313 aaPredicted RBP11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 C6orf50Q9HD87 102 aa11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 KCNH7Q9NS40 1196 aa11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 CHMP5Q9NZZ3 219 aa11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 KIF3AQ9Y496 699 aa11.99□□□□□ -0.49
SCAMP4-208ENST00000489554 MYH7BA7E2Y1 1941 aa11.98□□□□□ -0.49
SCAMP4-208ENST00000489554 NFASCO94856 1347 aa11.98□□□□□ -0.49
SCAMP4-208ENST00000489554 VPS37CA5D8V6 355 aaPredicted RBP11.98□□□□□ -0.49
SCAMP4-208ENST00000489554 CAND2O75155 1236 aa11.98□□□□□ -0.49
SCAMP4-208ENST00000489554 ZSCAN22P10073 491 aaPredicted RBP11.98□□□□□ -0.49
SCAMP4-208ENST00000489554 ATP2A2P16615 1042 aaKnown RBP11.98□□□□□ -0.49
SCAMP4-208ENST00000489554 U2AF2P26368 475 aaKnown RBP eCLIP11.98□□□□□ -0.49
SCAMP4-208ENST00000489554 ZNF200P98182 395 aaPredicted RBP11.98□□□□□ -0.49
SCAMP4-208ENST00000489554 NR5A1Q13285 461 aa11.98□□□□□ -0.49
SCAMP4-208ENST00000489554 TRIM71Q2Q1W2 868 aaKnown RBP11.98□□□□□ -0.49
SCAMP4-208ENST00000489554 EARS2Q5JPH6 523 aaKnown RBP11.98□□□□□ -0.49
SCAMP4-208ENST00000489554 NIPA1Q7RTP0 329 aa11.98□□□□□ -0.49
SCAMP4-208ENST00000489554 TRIM50Q86XT4 487 aa11.98□□□□□ -0.49
SCAMP4-208ENST00000489554 REXO1Q8N1G1 1221 aaKnown RBP11.98□□□□□ -0.49
SCAMP4-208ENST00000489554 PHOSPHO2Q8TCD6 241 aa11.98□□□□□ -0.49
SCAMP4-208ENST00000489554 BICD2Q8TD16 824 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms