RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 CYP3A7P24462 503 aa19.68■□□□□ 0.74
MDC1-206ENST00000489540 KRT2P35908 639 aa19.68■□□□□ 0.74
MDC1-206ENST00000489540 ACTR2P61160 394 aa19.68■□□□□ 0.74
MDC1-206ENST00000489540 PPIGQ13427 754 aaKnown RBP eCLIP19.68■□□□□ 0.748e-9■■□□□ 13.4
MDC1-206ENST00000489540 MOXD1Q6UVY6 613 aa19.68■□□□□ 0.74
MDC1-206ENST00000489540 DHX15O43143 795 aaKnown RBP19.68■□□□□ 0.74
MDC1-206ENST00000489540 ATG7O95352 703 aa19.68■□□□□ 0.74
MDC1-206ENST00000489540 GNAT1P11488 350 aa19.68■□□□□ 0.74
MDC1-206ENST00000489540 CYP2C18P33260 490 aa19.68■□□□□ 0.74
MDC1-206ENST00000489540 BFSP2Q13515 415 aa19.68■□□□□ 0.74
MDC1-206ENST00000489540 INF2Q27J81 1249 aa19.68■□□□□ 0.74
MDC1-206ENST00000489540 Q4G0T1 1027 aa19.68■□□□□ 0.74
MDC1-206ENST00000489540 RETREG2Q8NC44 543 aa19.68■□□□□ 0.74
MDC1-206ENST00000489540 OXER1Q8TDS5 423 aa19.68■□□□□ 0.74
MDC1-206ENST00000489540 GLG1Q92896 1179 aa19.68■□□□□ 0.74
MDC1-206ENST00000489540 LENG9Q96B70 501 aa19.68■□□□□ 0.74
MDC1-206ENST00000489540 AZI2Q9H6S1 392 aa19.68■□□□□ 0.74
MDC1-206ENST00000489540 ERAP1Q9NZ08 941 aa19.68■□□□□ 0.74
MDC1-206ENST00000489540 TCEAL9Q9UHQ7 104 aa19.68■□□□□ 0.74
MDC1-206ENST00000489540 C17orf102A2RUQ5 167 aa19.67■□□□□ 0.74
MDC1-206ENST00000489540 LGR5O75473 907 aa19.67■□□□□ 0.74
MDC1-206ENST00000489540 MMP1P03956 469 aa19.67■□□□□ 0.74
MDC1-206ENST00000489540 SMIM10L2AP0DMW4 78 aa19.67■□□□□ 0.74
MDC1-206ENST00000489540 SMIM10L2BP0DMW5 78 aa19.67■□□□□ 0.74
MDC1-206ENST00000489540 KRT40Q6A162 431 aa19.67■□□□□ 0.74
MDC1-206ENST00000489540 PIK3AP1Q6ZUJ8 805 aa19.67■□□□□ 0.74
MDC1-206ENST00000489540 TRIM50Q86XT4 487 aa19.67■□□□□ 0.74
MDC1-206ENST00000489540 CCDC155Q8N6L0 562 aa19.67■□□□□ 0.74
MDC1-206ENST00000489540 FAM184AQ8NB25 1140 aa19.67■□□□□ 0.74
MDC1-206ENST00000489540 TNPO1Q92973 898 aaKnown RBP19.67■□□□□ 0.74
MDC1-206ENST00000489540 NAP1L4Q99733 375 aaKnown RBP19.67■□□□□ 0.74
MDC1-206ENST00000489540 DDX39AO00148 427 aaKnown RBP19.66■□□□□ 0.74
MDC1-206ENST00000489540 PITPNM1O00562 1244 aa19.66■□□□□ 0.74
MDC1-206ENST00000489540 CSF2RAP15509 400 aa19.66■□□□□ 0.74
MDC1-206ENST00000489540 PTK7Q13308 1070 aa19.66■□□□□ 0.74
MDC1-206ENST00000489540 SAFBQ15424 915 aaKnown RBP eCLIP19.66■□□□□ 0.74
MDC1-206ENST00000489540 ZNF746Q6NUN9 644 aaPredicted RBP19.66■□□□□ 0.74
MDC1-206ENST00000489540 PLPPR4Q7Z2D5 763 aa19.66■□□□□ 0.74
MDC1-206ENST00000489540 NEK8Q86SG6 692 aa19.66■□□□□ 0.74
MDC1-206ENST00000489540 CAGE1Q8TC20 777 aa19.66■□□□□ 0.74
MDC1-206ENST00000489540 TMX3Q96JJ7 454 aa19.66■□□□□ 0.74
MDC1-206ENST00000489540 C8orf76Q96K31 380 aa19.66■□□□□ 0.74
MDC1-206ENST00000489540 MBOAT7Q96N66 472 aa19.66■□□□□ 0.74
MDC1-206ENST00000489540 CTAGE1Q96RT6 745 aa19.66■□□□□ 0.74
MDC1-206ENST00000489540 RIT2Q99578 217 aa19.66■□□□□ 0.74
MDC1-206ENST00000489540 RNPEPQ9H4A4 650 aa19.66■□□□□ 0.74
MDC1-206ENST00000489540 EMSYQ7Z589 1322 aa19.66■□□□□ 0.74
MDC1-206ENST00000489540 DNAH12Q6ZR08 3092 aa19.66■□□□□ 0.74
MDC1-206ENST00000489540 MSH4O15457 936 aa19.65■□□□□ 0.74
MDC1-206ENST00000489540 CCNE2O96020 404 aa19.65■□□□□ 0.74
MDC1-206ENST00000489540 GCFC2P16383 781 aaKnown RBP19.65■□□□□ 0.74
MDC1-206ENST00000489540 HOXC8P31273 242 aa19.65■□□□□ 0.74
MDC1-206ENST00000489540 STAT5BP51692 787 aa19.65■□□□□ 0.74
MDC1-206ENST00000489540 CCL23P55773 120 aa19.65■□□□□ 0.74
MDC1-206ENST00000489540 KRT76Q01546 638 aa19.65■□□□□ 0.74
MDC1-206ENST00000489540 LETM2Q2VYF4 491 aa19.65■□□□□ 0.74
MDC1-206ENST00000489540 PPP4R3AQ6IN85 833 aa19.65■□□□□ 0.74
MDC1-206ENST00000489540 MIS18BP1Q6P0N0 1132 aa19.65■□□□□ 0.74
MDC1-206ENST00000489540 ABHD15Q6UXT9 468 aa19.65■□□□□ 0.74
MDC1-206ENST00000489540 SMAP1Q8IYB5 467 aaPredicted RBP19.65■□□□□ 0.74
MDC1-206ENST00000489540 PCYT2Q99447 389 aa19.65■□□□□ 0.74
MDC1-206ENST00000489540 DDX25Q9UHL0 483 aaKnown RBP19.65■□□□□ 0.74
MDC1-206ENST00000489540 NRCAMQ92823 1304 aa19.65■□□□□ 0.74
MDC1-206ENST00000489540 IGKV6D-21A0A0A0MT36 114 aa19.64■□□□□ 0.73
MDC1-206ENST00000489540 BTBD18B2RXH4 712 aa19.64■□□□□ 0.73
MDC1-206ENST00000489540 TDP2O95551 362 aa19.64■□□□□ 0.73
MDC1-206ENST00000489540 SLC26A2P50443 739 aa19.64■□□□□ 0.73
MDC1-206ENST00000489540 ZNF200P98182 395 aaPredicted RBP19.64■□□□□ 0.73
MDC1-206ENST00000489540 NR5A1Q13285 461 aa19.64■□□□□ 0.73
MDC1-206ENST00000489540 SHHQ15465 462 aa19.64■□□□□ 0.73
MDC1-206ENST00000489540 DIS3L2Q8IYB7 885 aaKnown RBP19.64■□□□□ 0.73
MDC1-206ENST00000489540 RPUSD2Q8IZ73 545 aaKnown RBP19.64■□□□□ 0.73
MDC1-206ENST00000489540 SLC5A5Q92911 643 aa19.64■□□□□ 0.73
MDC1-206ENST00000489540 TNFRSF25Q93038 417 aa19.64■□□□□ 0.73
MDC1-206ENST00000489540 ATP6V0A1Q93050 837 aa19.64■□□□□ 0.73
MDC1-206ENST00000489540 UIMC1Q96RL1 719 aa19.64■□□□□ 0.73
MDC1-206ENST00000489540 SETD4Q9NVD3 440 aa19.64■□□□□ 0.73
MDC1-206ENST00000489540 KIF3AQ9Y496 699 aa19.64■□□□□ 0.73
MDC1-206ENST00000489540 UMODL1Q5DID0 1318 aa19.64■□□□□ 0.73
MDC1-206ENST00000489540 GAS7O60861 476 aa19.63■□□□□ 0.73
MDC1-206ENST00000489540 CD2BP2O95400 341 aaKnown RBP19.63■□□□□ 0.73
MDC1-206ENST00000489540 FOSBP53539 338 aa19.63■□□□□ 0.73
MDC1-206ENST00000489540 EPHB4P54760 987 aa19.63■□□□□ 0.73
MDC1-206ENST00000489540 RBL2Q08999 1139 aa19.63■□□□□ 0.73
MDC1-206ENST00000489540 LRIT3Q3SXY7 679 aa19.63■□□□□ 0.73
MDC1-206ENST00000489540 FAM160B1Q5W0V3 765 aa19.63■□□□□ 0.73
MDC1-206ENST00000489540 AFAP1L1Q8TED9 768 aa19.63■□□□□ 0.73
MDC1-206ENST00000489540 WNT8AQ9H1J5 351 aa19.63■□□□□ 0.73
MDC1-206ENST00000489540 IL23AQ9NPF7 189 aa19.63■□□□□ 0.73
MDC1-206ENST00000489540 PCDHA10Q9Y5I2 948 aa19.63■□□□□ 0.73
MDC1-206ENST00000489540 MYH7BA7E2Y1 1941 aa19.63■□□□□ 0.73
MDC1-206ENST00000489540 BACH1O14867 736 aa19.62■□□□□ 0.73
MDC1-206ENST00000489540 IQCF3P0C7M6 154 aa19.62■□□□□ 0.73
MDC1-206ENST00000489540 MARK3P27448 753 aa19.62■□□□□ 0.73
MDC1-206ENST00000489540 RFC2P35250 354 aa19.62■□□□□ 0.73
MDC1-206ENST00000489540 HIC1Q14526 733 aa19.62■□□□□ 0.73
MDC1-206ENST00000489540 EARS2Q5JPH6 523 aaKnown RBP19.62■□□□□ 0.73
MDC1-206ENST00000489540 LRCH2Q5VUJ6 765 aa19.62■□□□□ 0.73
MDC1-206ENST00000489540 SERINC5Q86VE9 423 aa19.62■□□□□ 0.73
MDC1-206ENST00000489540 FBXO18Q8NFZ0 1043 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms