RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 GRK3P35626 688 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 DAPK1P53355 1430 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 ITGA1P56199 1179 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 GPR85P60893 370 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 TROQ12816 1431 aaPredicted RBP3.91□□□□□ -1.78
CALD1-221ENST00000489019 SF3A1Q15459 793 aaKnown RBP3.91□□□□□ -1.78
CALD1-221ENST00000489019 CHRNA2Q15822 529 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 KIZQ2M2Z5 673 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 LILRA6Q6PI73 481 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 OTOP3Q7RTS5 596 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 SCUBE1Q8IWY4 988 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 RBM12BQ8IXT5 1001 aaKnown RBP3.91□□□□□ -1.78
CALD1-221ENST00000489019 IFNL3Q8IZI9 196 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 CLEC4DQ8WXI8 215 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 PRG4Q92954 1404 aaPredicted RBP3.91□□□□□ -1.78
CALD1-221ENST00000489019 DNAJC2Q99543 621 aaKnown RBP3.91□□□□□ -1.78
CALD1-221ENST00000489019 DNAJC7Q99615 494 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 ZFYVE21Q9BQ24 234 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 SPATA25Q9BR10 227 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 SLC6A20Q9NP91 592 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 LUC7LQ9NQ29 371 aaKnown RBP3.91□□□□□ -1.78
CALD1-221ENST00000489019 MYOTQ9UBF9 498 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 ASH2LQ9UBL3 628 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 PCDHB4Q9Y5E5 795 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 PTPRGP23470 1445 aa3.9□□□□□ -1.78
CALD1-221ENST00000489019 SLC27A2O14975 620 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 NKRFO15226 690 aaKnown RBP eCLIP3.9□□□□□ -1.79
CALD1-221ENST00000489019 SASH1O94885 1247 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 LRG1P02750 347 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 LTFP02788 710 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 TSPY4P0CV99 314 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 TSPY10P0CW01 314 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 COL6A2P12110 1019 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 THBS2P35442 1172 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 KCNC1P48547 511 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 ADAM9Q13443 819 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 RTP5Q14D33 572 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 HABP4Q5JVS0 413 aaKnown RBP3.9□□□□□ -1.79
CALD1-221ENST00000489019 TEPPQ6URK8 271 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 LRP10Q7Z4F1 713 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 SP8Q8IXZ3 490 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 ZDHHC14Q8IZN3 488 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 CARFQ8N187 725 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.9□□□□□ -1.79
CALD1-221ENST00000489019 SREK1Q8WXA9 508 aaKnown RBP3.9□□□□□ -1.79
CALD1-221ENST00000489019 KISS1RQ969F8 398 aaPredicted RBP3.9□□□□□ -1.79
CALD1-221ENST00000489019 TOE1Q96GM8 510 aaKnown RBP3.9□□□□□ -1.79
CALD1-221ENST00000489019 SRPK1Q96SB4 655 aaKnown RBP3.9□□□□□ -1.79
CALD1-221ENST00000489019 MPHOSPH9Q99550 1183 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 KCNJ15Q99712 375 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 CDC6Q99741 560 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 ADAM7Q9H2U9 754 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 SMOC1Q9H4F8 434 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 IPPKQ9H8X2 491 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 DTLQ9NZJ0 730 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 RBPJLQ9UBG7 517 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 TELO2Q9Y4R8 837 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 KIF14Q15058 1648 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 CAMSAP2Q08AD1 1489 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 ZNF644Q9H582 1327 aaPredicted RBP3.9□□□□□ -1.79
CALD1-221ENST00000489019 CHD1O14646 1710 aa3.9□□□□□ -1.79
CALD1-221ENST00000489019 AKNAQ7Z591 1439 aa3.89□□□□□ -1.79
CALD1-221ENST00000489019 DNMT1P26358 1616 aaKnown RBP3.89□□□□□ -1.79
CALD1-221ENST00000489019 TCRBV5S4A2TA0A5A2 114 aa3.89□□□□□ -1.79
CALD1-221ENST00000489019 KRIT1O00522 736 aa3.89□□□□□ -1.79
CALD1-221ENST00000489019 CTSWP56202 376 aa3.89□□□□□ -1.79
CALD1-221ENST00000489019 SUMO1P63165 101 aaKnown RBP3.89□□□□□ -1.79
CALD1-221ENST00000489019 GRIN1Q05586 938 aa3.89□□□□□ -1.79
CALD1-221ENST00000489019 DDX10Q13206 875 aaKnown RBP3.89□□□□□ -1.79
CALD1-221ENST00000489019 LONRF2Q1L5Z9 754 aa3.89□□□□□ -1.79
CALD1-221ENST00000489019 PRR31Q5SQ13 230 aa3.89□□□□□ -1.79
CALD1-221ENST00000489019 ZC3H18Q86VM9 953 aaKnown RBP3.89□□□□□ -1.79
CALD1-221ENST00000489019 JMYQ8N9B5 988 aa3.89□□□□□ -1.79
CALD1-221ENST00000489019 KYQ8NBH2 561 aa3.89□□□□□ -1.79
CALD1-221ENST00000489019 UHMK1Q8TAS1 419 aaKnown RBP3.89□□□□□ -1.79
CALD1-221ENST00000489019 PHOSPHO1Q8TCT1 267 aa3.89□□□□□ -1.79
CALD1-221ENST00000489019 SH3RF2Q8TEC5 729 aa3.89□□□□□ -1.79
CALD1-221ENST00000489019 PTPRN2Q92932 1015 aa3.89□□□□□ -1.79
CALD1-221ENST00000489019 MKL1Q969V6 931 aa3.89□□□□□ -1.79
CALD1-221ENST00000489019 YIPF4Q9BSR8 244 aa3.89□□□□□ -1.79
CALD1-221ENST00000489019 DHRS4Q9BTZ2 278 aa3.89□□□□□ -1.79
CALD1-221ENST00000489019 NTMQ9P121 344 aa3.89□□□□□ -1.79
CALD1-221ENST00000489019 MRPS23Q9Y3D9 190 aaKnown RBP3.89□□□□□ -1.79
CALD1-221ENST00000489019 PCDHA8Q9Y5H6 950 aa3.89□□□□□ -1.79
CALD1-221ENST00000489019 ABCA8O94911 1581 aa3.89□□□□□ -1.79
CALD1-221ENST00000489019 ROCK1Q13464 1354 aa3.89□□□□□ -1.79
CALD1-221ENST00000489019 ANKRD30AQ9BXX3 1397 aa3.89□□□□□ -1.79
CALD1-221ENST00000489019 ADCY10Q96PN6 1610 aa3.88□□□□□ -1.79
CALD1-221ENST00000489019 ABCC5O15440 1437 aa3.88□□□□□ -1.79
CALD1-221ENST00000489019 ATP10BO94823 1461 aa3.88□□□□□ -1.79
CALD1-221ENST00000489019 FAM47E-STBD1D6RA91 191 aa3.88□□□□□ -1.79
CALD1-221ENST00000489019 ANP32CO43423 234 aa3.88□□□□□ -1.79
CALD1-221ENST00000489019 GNAT1P11488 350 aa3.88□□□□□ -1.79
CALD1-221ENST00000489019 RPL13P26373 211 aaKnown RBP3.88□□□□□ -1.79
CALD1-221ENST00000489019 SARSP49591 514 aaKnown RBP3.88□□□□□ -1.79
CALD1-221ENST00000489019 NKX3-2P78367 333 aa3.88□□□□□ -1.79
CALD1-221ENST00000489019 NT5DC1Q5TFE4 455 aa3.88□□□□□ -1.79
CALD1-221ENST00000489019 CYP4F22Q6NT55 531 aa3.88□□□□□ -1.79
CALD1-221ENST00000489019 MAMDC2Q7Z304 686 aaPredicted RBP3.88□□□□□ -1.79
CALD1-221ENST00000489019 MTDHQ86UE4 582 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms