RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 PGAP2Q9UHJ9 254 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 DAAM1Q9Y4D1 1078 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 A0A1W2PQU0 124 aa4.25□□□□□ -1.73
PRPF4-203ENST00000488937 CHURC1-FNTBB4DL54 471 aa4.25□□□□□ -1.73
PRPF4-203ENST00000488937 FZD9O00144 591 aa4.25□□□□□ -1.73
PRPF4-203ENST00000488937 TIMM44O43615 452 aa4.25□□□□□ -1.73
PRPF4-203ENST00000488937 ARL4AP40617 200 aa4.25□□□□□ -1.73
PRPF4-203ENST00000488937 YARSP54577 528 aaKnown RBP4.25□□□□□ -1.73
PRPF4-203ENST00000488937 INHBEP58166 350 aa4.25□□□□□ -1.73
PRPF4-203ENST00000488937 GALEQ14376 348 aa4.25□□□□□ -1.73
PRPF4-203ENST00000488937 PCBP1Q15365 356 aaKnown RBP eCLIP4.25□□□□□ -1.73
PRPF4-203ENST00000488937 ZYXQ15942 572 aaKnown RBP4.25□□□□□ -1.73
PRPF4-203ENST00000488937 CLEC16AQ2KHT3 1053 aa4.25□□□□□ -1.73
PRPF4-203ENST00000488937 ALFQ53S48 1182 aa4.25□□□□□ -1.73
PRPF4-203ENST00000488937 CDCP2Q5VXM1 449 aa4.25□□□□□ -1.73
PRPF4-203ENST00000488937 INTS3Q68E01 1043 aaKnown RBP4.25□□□□□ -1.73
PRPF4-203ENST00000488937 CCDC70Q6NSX1 233 aa4.25□□□□□ -1.73
PRPF4-203ENST00000488937 CCDC174Q6PII3 467 aa4.25□□□□□ -1.73
PRPF4-203ENST00000488937 SIRT2Q8IXJ6 389 aa4.25□□□□□ -1.73
PRPF4-203ENST00000488937 SMAP1Q8IYB5 467 aaPredicted RBP4.25□□□□□ -1.73
PRPF4-203ENST00000488937 TMEFF1Q8IYR6 380 aa4.25□□□□□ -1.73
PRPF4-203ENST00000488937 CBARPQ8N350 705 aaPredicted RBP4.25□□□□□ -1.73
PRPF4-203ENST00000488937 PAF1Q8N7H5 531 aa4.25□□□□□ -1.73
PRPF4-203ENST00000488937 FAM13CQ8NE31 585 aa4.25□□□□□ -1.73
PRPF4-203ENST00000488937 LEO1Q8WVC0 666 aaPredicted RBP4.25□□□□□ -1.73
PRPF4-203ENST00000488937 RNF141Q8WVD5 230 aa4.25□□□□□ -1.73
PRPF4-203ENST00000488937 GJA10Q969M2 543 aa4.25□□□□□ -1.73
PRPF4-203ENST00000488937 ELAC2Q9BQ52 826 aaKnown RBP4.25□□□□□ -1.73
PRPF4-203ENST00000488937 HERPUD2Q9BSE4 406 aa4.25□□□□□ -1.73
PRPF4-203ENST00000488937 SLC13A1Q9BZW2 595 aa4.25□□□□□ -1.73
PRPF4-203ENST00000488937 TMX4Q9H1E5 349 aaPredicted RBP4.25□□□□□ -1.73
PRPF4-203ENST00000488937 ZHX3Q9H4I2 956 aa4.25□□□□□ -1.73
PRPF4-203ENST00000488937 PHAXQ9H814 394 aaKnown RBP4.25□□□□□ -1.73
PRPF4-203ENST00000488937 AS3MTQ9HBK9 375 aa4.25□□□□□ -1.73
PRPF4-203ENST00000488937 DDX21Q9NR30 783 aaKnown RBP eCLIP4.25□□□□□ -1.73
PRPF4-203ENST00000488937 PNMA8BQ9ULN7 279 aaPredicted RBP4.25□□□□□ -1.73
PRPF4-203ENST00000488937 TRBV23-1A0A0A0MS06 115 aa4.24□□□□□ -1.73
PRPF4-203ENST00000488937 RASSF10A6NK89 507 aa4.24□□□□□ -1.73
PRPF4-203ENST00000488937 PRRT4C9JH25 899 aa4.24□□□□□ -1.73
PRPF4-203ENST00000488937 TNFRSF10CO14798 259 aa4.24□□□□□ -1.73
PRPF4-203ENST00000488937 PIP5K1CO60331 668 aa4.24□□□□□ -1.73
PRPF4-203ENST00000488937 C6orf222P0C671 652 aaPredicted RBP4.24□□□□□ -1.73
PRPF4-203ENST00000488937 CASP2P42575 452 aa4.24□□□□□ -1.73
PRPF4-203ENST00000488937 SARSP49591 514 aaKnown RBP4.24□□□□□ -1.73
PRPF4-203ENST00000488937 GJA9P57773 515 aa4.24□□□□□ -1.73
PRPF4-203ENST00000488937 ERVFRD-1P60508 538 aa4.24□□□□□ -1.73
PRPF4-203ENST00000488937 POU5F1Q01860 360 aaKnown RBP4.24□□□□□ -1.73
PRPF4-203ENST00000488937 TCIRG1Q13488 830 aa4.24□□□□□ -1.73
PRPF4-203ENST00000488937 MYBPC2Q14324 1141 aa4.24□□□□□ -1.73
PRPF4-203ENST00000488937 INAVAQ3KP66 663 aa4.24□□□□□ -1.73
PRPF4-203ENST00000488937 MINDY4Q4G0A6 757 aa4.24□□□□□ -1.73
PRPF4-203ENST00000488937 TMEM240Q5SV17 173 aa4.24□□□□□ -1.73
PRPF4-203ENST00000488937 UNC5AQ6ZN44 842 aa4.24□□□□□ -1.73
PRPF4-203ENST00000488937 CPXCR1Q8N123 301 aa4.24□□□□□ -1.73
PRPF4-203ENST00000488937 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.24□□□□□ -1.73
PRPF4-203ENST00000488937 GSTCDQ8NEC7 633 aa4.24□□□□□ -1.73
PRPF4-203ENST00000488937 RBM15Q96T37 977 aaKnown RBP eCLIP4.24□□□□□ -1.73
PRPF4-203ENST00000488937 ASCC2Q9H1I8 757 aaPredicted RBP4.24□□□□□ -1.73
PRPF4-203ENST00000488937 GMIPQ9P107 970 aa4.24□□□□□ -1.73
PRPF4-203ENST00000488937 GTF2A1LQ9UNN4 478 aa4.24□□□□□ -1.73
PRPF4-203ENST00000488937 A0A087WZG4 1122 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 TRAV20A0A0B4J274 112 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 APAF1O14727 1248 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 RGS13O14921 159 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 ZEB2O60315 1214 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 NBPF7P0C2Y1 421 aaPredicted RBP4.23□□□□□ -1.73
PRPF4-203ENST00000488937 PFKLP17858 780 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 LMO1P25800 156 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 HALP42357 657 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 ZNF143P52747 638 aaPredicted RBP4.23□□□□□ -1.73
PRPF4-203ENST00000488937 SLURP1P55000 103 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 LAPTM5Q13571 262 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 MLECQ14165 292 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 KCTD2Q14681 263 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 SAFBQ15424 915 aaKnown RBP eCLIP4.23□□□□□ -1.73
PRPF4-203ENST00000488937 YOD1Q5VVQ6 348 aaPredicted RBP4.23□□□□□ -1.73
PRPF4-203ENST00000488937 OVOS1Q6IE37 1185 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 CEP128Q6ZU80 1094 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 EPM2AIP1Q7L775 607 aaPredicted RBP4.23□□□□□ -1.73
PRPF4-203ENST00000488937 HDGFL2Q7Z4V5 671 aaPredicted RBP4.23□□□□□ -1.73
PRPF4-203ENST00000488937 SPRED1Q7Z699 444 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 LDHDQ86WU2 507 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 TPH2Q8IWU9 490 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 SCUBE1Q8IWY4 988 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 C1orf131Q8NDD1 294 aaKnown RBP4.23□□□□□ -1.73
PRPF4-203ENST00000488937 ENOX1Q8TC92 643 aaKnown RBP4.23□□□□□ -1.73
PRPF4-203ENST00000488937 COG1Q8WTW3 980 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 CCDC74BQ96LY2 380 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 C8orf49Q96NF6 230 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 SAMD11Q96NU1 681 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 ORAI3Q9BRQ5 295 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 ASPNQ9BXN1 380 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 IFT22Q9H7X7 185 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 CNNM2Q9H8M5 875 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 PLCB1Q9NQ66 1216 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 KLHL11Q9NVR0 708 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 KLHL3Q9UH77 587 aa4.23□□□□□ -1.73
PRPF4-203ENST00000488937 PUF60Q9UHX1 559 aaKnown RBP4.23□□□□□ -1.73
PRPF4-203ENST00000488937 APOBEC2Q9Y235 224 aaKnown RBP4.23□□□□□ -1.73
PRPF4-203ENST00000488937 IPPQ9Y573 584 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms