RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 SCLYQ96I15 445 aa16.2■□□□□ 0.18
COL9A2-208ENST00000488463 PCYT2Q99447 389 aa16.2■□□□□ 0.18
COL9A2-208ENST00000488463 PKD2L1Q9P0L9 805 aa16.2■□□□□ 0.18
COL9A2-208ENST00000488463 PCDHA4Q9UN74 947 aa16.2■□□□□ 0.18
COL9A2-208ENST00000488463 LGR5O75473 907 aa16.19■□□□□ 0.18
COL9A2-208ENST00000488463 TCF7P36402 384 aaPredicted RBP16.19■□□□□ 0.18
COL9A2-208ENST00000488463 RBM25P49756 843 aaKnown RBP16.19■□□□□ 0.18
COL9A2-208ENST00000488463 ADAM17P78536 824 aa16.19■□□□□ 0.18
COL9A2-208ENST00000488463 SP4Q02446 784 aa16.19■□□□□ 0.18
COL9A2-208ENST00000488463 CPLX2Q6PUV4 134 aaKnown RBP16.19■□□□□ 0.18
COL9A2-208ENST00000488463 ZNF365Q70YC5 407 aa16.19■□□□□ 0.18
COL9A2-208ENST00000488463 SEPT1Q8WYJ6 367 aa16.19■□□□□ 0.18
COL9A2-208ENST00000488463 RNPEPQ9H4A4 650 aa16.19■□□□□ 0.18
COL9A2-208ENST00000488463 GJB4Q9NTQ9 266 aa16.19■□□□□ 0.18
COL9A2-208ENST00000488463 KAT6AQ92794 2004 aa16.19■□□□□ 0.18
COL9A2-208ENST00000488463 WDR81Q562E7 1941 aa16.19■□□□□ 0.18
COL9A2-208ENST00000488463 EYSQ5T1H1 3165 aa16.19■□□□□ 0.18
COL9A2-208ENST00000488463 RBAK-RBAKDNI3L0D1 243 aa16.18■□□□□ 0.18
COL9A2-208ENST00000488463 CDKL5O76039 1030 aa16.18■□□□□ 0.18
COL9A2-208ENST00000488463 ATG7O95352 703 aa16.18■□□□□ 0.18
COL9A2-208ENST00000488463 CCNE2O96020 404 aa16.18■□□□□ 0.18
COL9A2-208ENST00000488463 IQCF3P0C7M6 154 aa16.18■□□□□ 0.18
COL9A2-208ENST00000488463 SMIM10L2AP0DMW4 78 aa16.18■□□□□ 0.18
COL9A2-208ENST00000488463 SMIM10L2BP0DMW5 78 aa16.18■□□□□ 0.18
COL9A2-208ENST00000488463 NLRP5P59047 1200 aa16.18■□□□□ 0.18
COL9A2-208ENST00000488463 PTK7Q13308 1070 aa16.18■□□□□ 0.18
COL9A2-208ENST00000488463 SERINC5Q86VE9 423 aa16.18■□□□□ 0.18
COL9A2-208ENST00000488463 NSUN7Q8NE18 718 aaKnown RBP16.18■□□□□ 0.18
COL9A2-208ENST00000488463 CAGE1Q8TC20 777 aa16.18■□□□□ 0.18
COL9A2-208ENST00000488463 PHF20Q9BVI0 1012 aa16.18■□□□□ 0.18
COL9A2-208ENST00000488463 JPH1Q9HDC5 661 aaPredicted RBP16.18■□□□□ 0.18
COL9A2-208ENST00000488463 SLC9A2Q9UBY0 812 aa16.18■□□□□ 0.18
COL9A2-208ENST00000488463 KCNJ14Q9UNX9 436 aa16.18■□□□□ 0.18
COL9A2-208ENST00000488463 EMSYQ7Z589 1322 aa16.18■□□□□ 0.18
COL9A2-208ENST00000488463 IGKV6D-21A0A0A0MT36 114 aa16.17■□□□□ 0.18
COL9A2-208ENST00000488463 ACTR2P61160 394 aa16.17■□□□□ 0.18
COL9A2-208ENST00000488463 UTP14CQ5TAP6 766 aaKnown RBP16.17■□□□□ 0.18
COL9A2-208ENST00000488463 FAM109BQ6ICB4 259 aaPredicted RBP16.17■□□□□ 0.18
COL9A2-208ENST00000488463 GALNT17Q6IS24 598 aa16.17■□□□□ 0.18
COL9A2-208ENST00000488463 PSRC1Q6PGN9 363 aaPredicted RBP16.17■□□□□ 0.18
COL9A2-208ENST00000488463 PLA2G4DQ86XP0 818 aa16.17■□□□□ 0.18
COL9A2-208ENST00000488463 BLIDQ8IZY5 108 aa16.17■□□□□ 0.18
COL9A2-208ENST00000488463 HERVK_113Q902F9 699 aa16.17■□□□□ 0.18
COL9A2-208ENST00000488463 RNPC3Q96LT9 517 aaKnown RBP16.17■□□□□ 0.18
COL9A2-208ENST00000488463 C22orf23Q9BZE7 217 aa16.17■□□□□ 0.18
COL9A2-208ENST00000488463 CXXC1Q9P0U4 656 aaPredicted RBP16.17■□□□□ 0.18
COL9A2-208ENST00000488463 TREHO43280 583 aa16.16■□□□□ 0.18
COL9A2-208ENST00000488463 CKBP12277 381 aa16.16■□□□□ 0.18
COL9A2-208ENST00000488463 ZNF76P36508 570 aa16.16■□□□□ 0.18
COL9A2-208ENST00000488463 USP11P51784 963 aa16.16■□□□□ 0.18
COL9A2-208ENST00000488463 SMAD3P84022 425 aaKnown RBP16.16■□□□□ 0.18
COL9A2-208ENST00000488463 BFSP2Q13515 415 aa16.16■□□□□ 0.18
COL9A2-208ENST00000488463 MBTPS1Q14703 1052 aa16.16■□□□□ 0.18
COL9A2-208ENST00000488463 AFAP1L1Q8TED9 768 aa16.16■□□□□ 0.18
COL9A2-208ENST00000488463 MBOAT7Q96N66 472 aa16.16■□□□□ 0.18
COL9A2-208ENST00000488463 SETD4Q9NVD3 440 aa16.16■□□□□ 0.18
COL9A2-208ENST00000488463 ORC3Q9UBD5 711 aaPredicted RBP16.16■□□□□ 0.18
COL9A2-208ENST00000488463 NOD1Q9Y239 953 aa16.16■□□□□ 0.18
COL9A2-208ENST00000488463 CYP3A7-CYP3A51PA0A087WV96 503 aa16.15■□□□□ 0.18
COL9A2-208ENST00000488463 C17orf102A2RUQ5 167 aa16.15■□□□□ 0.18
COL9A2-208ENST00000488463 IPO5O00410 1097 aaKnown RBP16.15■□□□□ 0.18
COL9A2-208ENST00000488463 JAK2O60674 1132 aa16.15■□□□□ 0.18
COL9A2-208ENST00000488463 CYP3A7P24462 503 aa16.15■□□□□ 0.18
COL9A2-208ENST00000488463 RFC2P35250 354 aa16.15■□□□□ 0.18
COL9A2-208ENST00000488463 ABHD15Q6UXT9 468 aa16.15■□□□□ 0.18
COL9A2-208ENST00000488463 Q7L0L9 218 aa16.15■□□□□ 0.18
COL9A2-208ENST00000488463 OXER1Q8TDS5 423 aa16.15■□□□□ 0.18
COL9A2-208ENST00000488463 TBCKQ8TEA7 893 aa16.15■□□□□ 0.18
COL9A2-208ENST00000488463 LMBR1Q8WVP7 490 aa16.15■□□□□ 0.18
COL9A2-208ENST00000488463 GBF1Q92538 1859 aa16.15■□□□□ 0.18
COL9A2-208ENST00000488463 UIMC1Q96RL1 719 aa16.15■□□□□ 0.18
COL9A2-208ENST00000488463 SDF4Q9BRK5 362 aa16.15■□□□□ 0.18
COL9A2-208ENST00000488463 ZNF215Q9UL58 517 aaPredicted RBP16.15■□□□□ 0.18
COL9A2-208ENST00000488463 PTPRSQ13332 1948 aa16.15■□□□□ 0.18
COL9A2-208ENST00000488463 PRUNE2Q8WUY3 3088 aa16.15■□□□□ 0.18
COL9A2-208ENST00000488463 MSH4O15457 936 aa16.14■□□□□ 0.17
COL9A2-208ENST00000488463 FGBP02675 491 aa16.14■□□□□ 0.17
COL9A2-208ENST00000488463 CXCL10P02778 98 aa16.14■□□□□ 0.17
COL9A2-208ENST00000488463 SELPP16109 830 aa16.14■□□□□ 0.17
COL9A2-208ENST00000488463 SETQ01105 290 aaPredicted RBP16.14■□□□□ 0.17
COL9A2-208ENST00000488463 TCTN1Q2MV58 587 aa16.14■□□□□ 0.17
COL9A2-208ENST00000488463 PRR16Q569H4 304 aa16.14■□□□□ 0.17
COL9A2-208ENST00000488463 MARCH8Q5T0T0 291 aa16.14■□□□□ 0.17
COL9A2-208ENST00000488463 ZNF618Q5T7W0 954 aa16.14■□□□□ 0.17
COL9A2-208ENST00000488463 RPUSD2Q8IZ73 545 aaKnown RBP16.14■□□□□ 0.17
COL9A2-208ENST00000488463 TNFRSF25Q93038 417 aa16.14■□□□□ 0.17
COL9A2-208ENST00000488463 ATP6V0A1Q93050 837 aa16.14■□□□□ 0.17
COL9A2-208ENST00000488463 SMARCAD1Q9H4L7 1026 aa16.14■□□□□ 0.17
COL9A2-208ENST00000488463 ERAP1Q9NZ08 941 aa16.14■□□□□ 0.17
COL9A2-208ENST00000488463 LIMCH1Q9UPQ0 1083 aa16.14■□□□□ 0.17
COL9A2-208ENST00000488463 SIP14410 1827 aa16.14■□□□□ 0.17
COL9A2-208ENST00000488463 MYH9P35579 1960 aaKnown RBP16.13■□□□□ 0.17
COL9A2-208ENST00000488463 MBLAC1A4D2B0 266 aaPredicted RBP16.13■□□□□ 0.17
COL9A2-208ENST00000488463 NBNO60934 754 aa16.13■□□□□ 0.17
COL9A2-208ENST00000488463 PFKMP08237 780 aa16.13■□□□□ 0.17
COL9A2-208ENST00000488463 Q4G0T1 1027 aa16.13■□□□□ 0.17
COL9A2-208ENST00000488463 EARS2Q5JPH6 523 aaKnown RBP16.13■□□□□ 0.17
COL9A2-208ENST00000488463 LRRC8DQ7L1W4 858 aa16.13■□□□□ 0.17
COL9A2-208ENST00000488463 OTOP2Q7RTS6 562 aa16.13■□□□□ 0.17
COL9A2-208ENST00000488463 PLPPR4Q7Z2D5 763 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 1290 ms