RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 HOXD8P13378 290 aaPredicted RBP12.62□□□□□ -0.39
LCN2-206ENST00000488391 RPS6KB1P23443 525 aa12.62□□□□□ -0.39
LCN2-206ENST00000488391 CTNNB1P35222 781 aa12.62□□□□□ -0.39
LCN2-206ENST00000488391 GTF2F1P35269 517 aaKnown RBP eCLIP12.62□□□□□ -0.39
LCN2-206ENST00000488391 SP2Q02086 613 aa12.62□□□□□ -0.39
LCN2-206ENST00000488391 HYAL1Q12794 435 aa12.62□□□□□ -0.39
LCN2-206ENST00000488391 ANKRD1Q15327 319 aa12.62□□□□□ -0.39
LCN2-206ENST00000488391 DGKHQ86XP1 1220 aa12.62□□□□□ -0.39
LCN2-206ENST00000488391 RNF135Q8IUD6 432 aa12.62□□□□□ -0.39
LCN2-206ENST00000488391 FIBCD1Q8N539 461 aa12.62□□□□□ -0.39
LCN2-206ENST00000488391 PNMA1Q8ND90 353 aa12.62□□□□□ -0.39
LCN2-206ENST00000488391 GPKOWQ92917 476 aaPredicted RBP eCLIP12.62□□□□□ -0.39
LCN2-206ENST00000488391 RNPEPQ9H4A4 650 aa12.62□□□□□ -0.39
LCN2-206ENST00000488391 BCAS3Q9H6U6 928 aa12.62□□□□□ -0.39
LCN2-206ENST00000488391 JMJD4Q9H9V9 463 aa12.62□□□□□ -0.39
LCN2-206ENST00000488391 E7EWF7 191 aa12.61□□□□□ -0.39
LCN2-206ENST00000488391 H3BRB1 525 aa12.61□□□□□ -0.39
LCN2-206ENST00000488391 SMAD2Q15796 467 aaKnown RBP12.61□□□□□ -0.39
LCN2-206ENST00000488391 CTC1Q2NKJ3 1217 aa12.61□□□□□ -0.39
LCN2-206ENST00000488391 HERC4Q5GLZ8 1057 aaPredicted RBP12.61□□□□□ -0.39
LCN2-206ENST00000488391 IER5LQ5T953 404 aa12.61□□□□□ -0.39
LCN2-206ENST00000488391 ESR2Q92731 530 aa12.61□□□□□ -0.39
LCN2-206ENST00000488391 PDCD2LQ9BRP1 358 aa12.61□□□□□ -0.39
LCN2-206ENST00000488391 TUT1Q9H6E5 874 aaKnown RBP12.61□□□□□ -0.39
LCN2-206ENST00000488391 KAT14Q9H8E8 782 aa12.61□□□□□ -0.39
LCN2-206ENST00000488391 MLXIPQ9HAP2 919 aa12.61□□□□□ -0.39
LCN2-206ENST00000488391 PDRG1Q9NUG6 133 aa12.61□□□□□ -0.39
LCN2-206ENST00000488391 SETD4Q9NVD3 440 aa12.61□□□□□ -0.39
LCN2-206ENST00000488391 STXBP3O00186 592 aa12.6□□□□□ -0.39
LCN2-206ENST00000488391 OPLAHO14841 1288 aa12.6□□□□□ -0.39
LCN2-206ENST00000488391 LINC01565O15544 149 aa12.6□□□□□ -0.39
LCN2-206ENST00000488391 PCP11498 1178 aaKnown RBP12.6□□□□□ -0.39
LCN2-206ENST00000488391 HOXA13P31271 388 aaPredicted RBP12.6□□□□□ -0.39
LCN2-206ENST00000488391 BMPR1AP36894 532 aa12.6□□□□□ -0.39
LCN2-206ENST00000488391 NT5C2P49902 561 aa12.6□□□□□ -0.39
LCN2-206ENST00000488391 HSD17B4P51659 736 aa12.6□□□□□ -0.39
LCN2-206ENST00000488391 KCNV1Q6PIU1 500 aa12.6□□□□□ -0.39
LCN2-206ENST00000488391 STOX1Q6ZVD7 989 aa12.6□□□□□ -0.39
LCN2-206ENST00000488391 VSIG10LQ86VR7 867 aa12.6□□□□□ -0.39
LCN2-206ENST00000488391 FBXL16Q8N461 479 aa12.6□□□□□ -0.39
LCN2-206ENST00000488391 PRSS33Q8NF86 280 aa12.6□□□□□ -0.39
LCN2-206ENST00000488391 IL31RAQ8NI17 732 aa12.6□□□□□ -0.39
LCN2-206ENST00000488391 EDAQ92838 391 aa12.6□□□□□ -0.39
LCN2-206ENST00000488391 PBXIP1Q96AQ6 731 aa12.6□□□□□ -0.39
LCN2-206ENST00000488391 POP1Q99575 1024 aaKnown RBP12.6□□□□□ -0.39
LCN2-206ENST00000488391 TAF6LQ9Y6J9 622 aa12.6□□□□□ -0.39
LCN2-206ENST00000488391 NEDD4P46934 1319 aa12.6□□□□□ -0.39
LCN2-206ENST00000488391 C5orf67F2Z3F1 127 aa12.59□□□□□ -0.39
LCN2-206ENST00000488391 KDM4AO75164 1064 aa12.59□□□□□ -0.39
LCN2-206ENST00000488391 LGALS2P05162 132 aa12.59□□□□□ -0.39
LCN2-206ENST00000488391 RB1P06400 928 aa12.59□□□□□ -0.39
LCN2-206ENST00000488391 PARP1P09874 1014 aaKnown RBP12.59□□□□□ -0.39
LCN2-206ENST00000488391 UBA1P22314 1058 aaKnown RBP12.59□□□□□ -0.39
LCN2-206ENST00000488391 HOXC8P31273 242 aa12.59□□□□□ -0.39
LCN2-206ENST00000488391 AK2P54819 239 aa12.59□□□□□ -0.39
LCN2-206ENST00000488391 TRDNQ13061 729 aa12.59□□□□□ -0.39
LCN2-206ENST00000488391 PGM5Q15124 567 aa12.59□□□□□ -0.39
LCN2-206ENST00000488391 ASPRV1Q53RT3 343 aa12.59□□□□□ -0.39
LCN2-206ENST00000488391 DHX32Q7L7V1 743 aaKnown RBP12.59□□□□□ -0.39
LCN2-206ENST00000488391 NCOA7Q8NI08 942 aa12.59□□□□□ -0.39
LCN2-206ENST00000488391 ZSCAN31Q96LW9 406 aaPredicted RBP12.59□□□□□ -0.39
LCN2-206ENST00000488391 C11orf84Q9BUA3 381 aaPredicted RBP12.59□□□□□ -0.39
LCN2-206ENST00000488391 AMNQ9BXJ7 453 aa12.59□□□□□ -0.39
LCN2-206ENST00000488391 RNF41Q9H4P4 317 aaPredicted RBP12.59□□□□□ -0.39
LCN2-206ENST00000488391 CNNM2Q9H8M5 875 aa12.59□□□□□ -0.39
LCN2-206ENST00000488391 CD207Q9UJ71 328 aa12.59□□□□□ -0.39
LCN2-206ENST00000488391 LIMCH1Q9UPQ0 1083 aa12.59□□□□□ -0.39
LCN2-206ENST00000488391 ATG2AQ2TAZ0 1938 aa12.58□□□□□ -0.39
LCN2-206ENST00000488391 TMEM221A6NGB7 291 aa12.58□□□□□ -0.4
LCN2-206ENST00000488391 M0R296 226 aa12.58□□□□□ -0.4
LCN2-206ENST00000488391 TBX10O75333 385 aa12.58□□□□□ -0.4
LCN2-206ENST00000488391 LINC00271P0C7V0 271 aa12.58□□□□□ -0.4
LCN2-206ENST00000488391 TGFB3P10600 412 aa12.58□□□□□ -0.4
LCN2-206ENST00000488391 EXOSC10Q01780 885 aaKnown RBP12.58□□□□□ -0.4
LCN2-206ENST00000488391 ADAM15Q13444 863 aa12.58□□□□□ -0.4
LCN2-206ENST00000488391 SMAD4Q13485 552 aaKnown RBP12.58□□□□□ -0.4
LCN2-206ENST00000488391 RALGAPA2Q2PPJ7 1873 aa12.58□□□□□ -0.4
LCN2-206ENST00000488391 CCDC178Q5BJE1 867 aa12.58□□□□□ -0.4
LCN2-206ENST00000488391 RALYLQ86SE5 291 aaKnown RBP12.58□□□□□ -0.4
LCN2-206ENST00000488391 FCHSD1Q86WN1 690 aa12.58□□□□□ -0.4
LCN2-206ENST00000488391 IQCA1Q86XH1 822 aa12.58□□□□□ -0.4
LCN2-206ENST00000488391 MB21D2Q8IYB1 491 aaPredicted RBP12.58□□□□□ -0.4
LCN2-206ENST00000488391 STAG2Q8N3U4 1231 aa12.58□□□□□ -0.4
LCN2-206ENST00000488391 KAT6AQ92794 2004 aa12.58□□□□□ -0.4
LCN2-206ENST00000488391 APBB2Q92870 758 aa12.58□□□□□ -0.4
LCN2-206ENST00000488391 MTA3Q9BTC8 594 aa12.58□□□□□ -0.4
LCN2-206ENST00000488391 AGXT2Q9BYV1 514 aa12.58□□□□□ -0.4
LCN2-206ENST00000488391 LMAN2LQ9H0V9 348 aa12.58□□□□□ -0.4
LCN2-206ENST00000488391 ALG13Q9NP73 1137 aaKnown RBP12.58□□□□□ -0.4
LCN2-206ENST00000488391 PCDHA1Q9Y5I3 950 aa12.58□□□□□ -0.4
LCN2-206ENST00000488391 ZDBF2Q9HCK1 2354 aa12.57□□□□□ -0.4
LCN2-206ENST00000488391 B4E1Z4 1266 aa12.57□□□□□ -0.4
LCN2-206ENST00000488391 NOP56O00567 594 aaKnown RBP12.57□□□□□ -0.4
LCN2-206ENST00000488391 ENPP3O14638 875 aa12.57□□□□□ -0.4
LCN2-206ENST00000488391 PPP1R11O60927 126 aaPredicted RBP12.57□□□□□ -0.4
LCN2-206ENST00000488391 CAND2O75155 1236 aa12.57□□□□□ -0.4
LCN2-206ENST00000488391 CHRNA1P02708 482 aa12.57□□□□□ -0.4
LCN2-206ENST00000488391 GNAT1P11488 350 aa12.57□□□□□ -0.4
LCN2-206ENST00000488391 CCND2P30279 289 aa12.57□□□□□ -0.4
LCN2-206ENST00000488391 MCM5P33992 734 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms