RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 PCDHA6Q9UN73 950 aa17.59■□□□□ 0.41
TRIM50-203ENST00000488217 PCDHA8Q9Y5H6 950 aa17.59■□□□□ 0.41
TRIM50-203ENST00000488217 UBIAD1Q9Y5Z9 338 aa17.59■□□□□ 0.41
TRIM50-203ENST00000488217 SPDYE3A6NKU9 549 aa17.58■□□□□ 0.4
TRIM50-203ENST00000488217 CTSHP09668 335 aa17.58■□□□□ 0.4
TRIM50-203ENST00000488217 KCNA2P16389 499 aa17.58■□□□□ 0.4
TRIM50-203ENST00000488217 RPAINQ86UA6 219 aa17.58■□□□□ 0.4
TRIM50-203ENST00000488217 SGMS1Q86VZ5 419 aa17.58■□□□□ 0.4
TRIM50-203ENST00000488217 RAB11FIP4Q86YS3 637 aa17.58■□□□□ 0.4
TRIM50-203ENST00000488217 LMBR1Q8WVP7 490 aa17.58■□□□□ 0.4
TRIM50-203ENST00000488217 JADE2Q9NQC1 790 aa17.58■□□□□ 0.4
TRIM50-203ENST00000488217 TET1Q8NFU7 2136 aa17.57■□□□□ 0.4
TRIM50-203ENST00000488217 UPP2O95045 317 aa17.57■□□□□ 0.4
TRIM50-203ENST00000488217 CHRNA1P02708 482 aa17.57■□□□□ 0.4
TRIM50-203ENST00000488217 MTMR1Q13613 665 aa17.57■□□□□ 0.4
TRIM50-203ENST00000488217 UBE2SQ16763 222 aa17.57■□□□□ 0.4
TRIM50-203ENST00000488217 RNF20Q5VTR2 975 aa17.57■□□□□ 0.4
TRIM50-203ENST00000488217 TMTC3Q6ZXV5 915 aa17.57■□□□□ 0.4
TRIM50-203ENST00000488217 SP7Q8TDD2 431 aaPredicted RBP17.57■□□□□ 0.4
TRIM50-203ENST00000488217 GDPD5Q8WTR4 605 aa17.57■□□□□ 0.4
TRIM50-203ENST00000488217 APBB2Q92870 758 aa17.57■□□□□ 0.4
TRIM50-203ENST00000488217 GLG1Q92896 1179 aa17.57■□□□□ 0.4
TRIM50-203ENST00000488217 NEK1Q96PY6 1258 aa17.57■□□□□ 0.4
TRIM50-203ENST00000488217 C17orf80Q9BSJ5 609 aa17.57■□□□□ 0.4
TRIM50-203ENST00000488217 SMARCAD1Q9H4L7 1026 aa17.57■□□□□ 0.4
TRIM50-203ENST00000488217 ERAP1Q9NZ08 941 aa17.57■□□□□ 0.4
TRIM50-203ENST00000488217 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.56■□□□□ 0.4
TRIM50-203ENST00000488217 EXOSC10Q01780 885 aaKnown RBP17.56■□□□□ 0.4
TRIM50-203ENST00000488217 TAF2Q6P1X5 1199 aa17.56■□□□□ 0.4
TRIM50-203ENST00000488217 HEATR3Q7Z4Q2 680 aa17.56■□□□□ 0.4
TRIM50-203ENST00000488217 FBXO22Q8NEZ5 403 aa17.56■□□□□ 0.4
TRIM50-203ENST00000488217 KIAA1217Q5T5P2 1943 aa17.55■□□□□ 0.4
TRIM50-203ENST00000488217 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.55■□□□□ 0.4
TRIM50-203ENST00000488217 COL9A1P20849 921 aa17.55■□□□□ 0.4
TRIM50-203ENST00000488217 PPFIA1Q13136 1202 aa17.55■□□□□ 0.4
TRIM50-203ENST00000488217 EPC2Q52LR7 807 aa17.55■□□□□ 0.4
TRIM50-203ENST00000488217 BMP2KLQ5H9B9 411 aa17.55■□□□□ 0.4
TRIM50-203ENST00000488217 DHX32Q7L7V1 743 aaKnown RBP17.55■□□□□ 0.4
TRIM50-203ENST00000488217 RSPH3Q86UC2 560 aa17.55■□□□□ 0.4
TRIM50-203ENST00000488217 MICU3Q86XE3 530 aa17.55■□□□□ 0.4
TRIM50-203ENST00000488217 SAMD11Q96NU1 681 aa17.55■□□□□ 0.4
TRIM50-203ENST00000488217 YME1L1Q96TA2 773 aa17.55■□□□□ 0.4
TRIM50-203ENST00000488217 IFIH1Q9BYX4 1025 aaKnown RBP17.55■□□□□ 0.4
TRIM50-203ENST00000488217 EHMT1Q9H9B1 1298 aa17.55■□□□□ 0.4
TRIM50-203ENST00000488217 PKD2L1Q9P0L9 805 aa17.55■□□□□ 0.4
TRIM50-203ENST00000488217 V9GY48 417 aaPredicted RBP17.55■□□□□ 0.4
TRIM50-203ENST00000488217 TRIP12Q14669 1992 aaPredicted RBP17.55■□□□□ 0.4
TRIM50-203ENST00000488217 BAZ2BQ9UIF8 2168 aaKnown RBP17.55■□□□□ 0.4
TRIM50-203ENST00000488217 ENPP3O14638 875 aa17.54■□□□□ 0.4
TRIM50-203ENST00000488217 GRIK4Q16099 956 aa17.54■□□□□ 0.4
TRIM50-203ENST00000488217 TSGA10IPQ3SY00 556 aa17.54■□□□□ 0.4
TRIM50-203ENST00000488217 MARCH8Q5T0T0 291 aa17.54■□□□□ 0.4
TRIM50-203ENST00000488217 RUFY4Q6ZNE9 571 aa17.54■□□□□ 0.4
TRIM50-203ENST00000488217 TEX2Q8IWB9 1127 aa17.54■□□□□ 0.4
TRIM50-203ENST00000488217 MXRA8Q9BRK3 442 aa17.54■□□□□ 0.4
TRIM50-203ENST00000488217 KCNH7Q9NS40 1196 aa17.54■□□□□ 0.4
TRIM50-203ENST00000488217 RBM28Q9NW13 759 aaKnown RBP17.54■□□□□ 0.4
TRIM50-203ENST00000488217 PRRC2BQ5JSZ5 2229 aaKnown RBP17.53■□□□□ 0.4
TRIM50-203ENST00000488217 RRN3P2A6NIE6 340 aa17.53■□□□□ 0.4
TRIM50-203ENST00000488217 FOSP01100 380 aaPredicted RBP17.53■□□□□ 0.4
TRIM50-203ENST00000488217 MARK3P27448 753 aa17.53■□□□□ 0.4
TRIM50-203ENST00000488217 PTPROQ16827 1216 aa17.53■□□□□ 0.4
TRIM50-203ENST00000488217 TMEM192Q8IY95 271 aa17.53■□□□□ 0.4
TRIM50-203ENST00000488217 CYP2W1Q8TAV3 490 aa17.53■□□□□ 0.4
TRIM50-203ENST00000488217 DNAJB3Q8WWF6 145 aa17.53■□□□□ 0.4
TRIM50-203ENST00000488217 TNPO1Q92973 898 aaKnown RBP17.53■□□□□ 0.4
TRIM50-203ENST00000488217 IL17RAQ96F46 866 aa17.53■□□□□ 0.4
TRIM50-203ENST00000488217 RIC8AQ9NPQ8 531 aa17.53■□□□□ 0.4
TRIM50-203ENST00000488217 BRPF3Q9ULD4 1205 aa17.53■□□□□ 0.4
TRIM50-203ENST00000488217 MBLAC1A4D2B0 266 aaPredicted RBP17.52■□□□□ 0.4
TRIM50-203ENST00000488217 H3BNC9 293 aa17.52■□□□□ 0.4
TRIM50-203ENST00000488217 ZBTB43O43298 467 aa17.52■□□□□ 0.4
TRIM50-203ENST00000488217 INSRRP14616 1297 aa17.52■□□□□ 0.4
TRIM50-203ENST00000488217 FUT2Q10981 343 aa17.52■□□□□ 0.4
TRIM50-203ENST00000488217 GPM6BQ13491 265 aa17.52■□□□□ 0.4
TRIM50-203ENST00000488217 LPIN1Q14693 890 aa17.52■□□□□ 0.4
TRIM50-203ENST00000488217 WWC2Q6AWC2 1192 aa17.52■□□□□ 0.4
TRIM50-203ENST00000488217 APOA5Q6Q788 366 aa17.52■□□□□ 0.4
TRIM50-203ENST00000488217 RASEFQ8IZ41 740 aa17.52■□□□□ 0.4
TRIM50-203ENST00000488217 MRPL38Q96DV4 380 aaKnown RBP17.52■□□□□ 0.4
TRIM50-203ENST00000488217 PCYT2Q99447 389 aa17.52■□□□□ 0.4
TRIM50-203ENST00000488217 C1QTNF1Q9BXJ1 281 aa17.52■□□□□ 0.4
TRIM50-203ENST00000488217 JPH1Q9HDC5 661 aaPredicted RBP17.52■□□□□ 0.4
TRIM50-203ENST00000488217 SLC9A2Q9UBY0 812 aa17.52■□□□□ 0.4
TRIM50-203ENST00000488217 TUBE1Q9UJT0 475 aa17.52■□□□□ 0.4
TRIM50-203ENST00000488217 GBF1Q92538 1859 aa17.52■□□□□ 0.39
TRIM50-203ENST00000488217 SMCO2A6NFE2 343 aa17.51■□□□□ 0.39
TRIM50-203ENST00000488217 ARP10275 920 aa17.51■□□□□ 0.39
TRIM50-203ENST00000488217 GHRP10912 638 aa17.51■□□□□ 0.39
TRIM50-203ENST00000488217 NAPAP54920 295 aa17.51■□□□□ 0.39
TRIM50-203ENST00000488217 IGBP1P78318 339 aa17.51■□□□□ 0.39
TRIM50-203ENST00000488217 MGAT3Q09327 533 aa17.51■□□□□ 0.39
TRIM50-203ENST00000488217 RTN1Q16799 776 aa17.51■□□□□ 0.39
TRIM50-203ENST00000488217 CEP55Q53EZ4 464 aa17.51■□□□□ 0.39
TRIM50-203ENST00000488217 TYW1BQ6NUM6 668 aa17.51■□□□□ 0.39
TRIM50-203ENST00000488217 PLPPR4Q7Z2D5 763 aa17.51■□□□□ 0.39
TRIM50-203ENST00000488217 SDF4Q9BRK5 362 aa17.51■□□□□ 0.39
TRIM50-203ENST00000488217 AZI2Q9H6S1 392 aa17.51■□□□□ 0.39
TRIM50-203ENST00000488217 UBE2ZQ9H832 354 aaPredicted RBP17.51■□□□□ 0.39
TRIM50-203ENST00000488217 MEIS1O00470 390 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms