RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 PLA2G4DQ86XP0 818 aa19.4■□□□□ 0.7
HMG20B-212ENST00000487894 TMEM199Q8N511 208 aa19.4■□□□□ 0.7
HMG20B-212ENST00000487894 JPH1Q9HDC5 661 aaPredicted RBP19.4■□□□□ 0.7
HMG20B-212ENST00000487894 GJB4Q9NTQ9 266 aa19.4■□□□□ 0.7
HMG20B-212ENST00000487894 SLC9A2Q9UBY0 812 aa19.4■□□□□ 0.7
HMG20B-212ENST00000487894 LIMCH1Q9UPQ0 1083 aa19.4■□□□□ 0.7
HMG20B-212ENST00000487894 TET1Q8NFU7 2136 aa19.4■□□□□ 0.7
HMG20B-212ENST00000487894 JAK2O60674 1132 aa19.39■□□□□ 0.69
HMG20B-212ENST00000487894 HOXC8P31273 242 aa19.39■□□□□ 0.69
HMG20B-212ENST00000487894 CCL23P55773 120 aa19.39■□□□□ 0.69
HMG20B-212ENST00000487894 SETQ01105 290 aaPredicted RBP19.39■□□□□ 0.69
HMG20B-212ENST00000487894 PPIGQ13427 754 aaKnown RBP eCLIP19.39■□□□□ 0.693e-8■■■□□ 15.2
HMG20B-212ENST00000487894 SEPT1Q8WYJ6 367 aa19.39■□□□□ 0.69
HMG20B-212ENST00000487894 DHX38Q92620 1227 aaKnown RBP19.39■□□□□ 0.69
HMG20B-212ENST00000487894 SDF4Q9BRK5 362 aa19.39■□□□□ 0.69
HMG20B-212ENST00000487894 NOD1Q9Y239 953 aa19.39■□□□□ 0.69
HMG20B-212ENST00000487894 PITPNM1O00562 1244 aa19.38■□□□□ 0.69
HMG20B-212ENST00000487894 SMIM10L2AP0DMW4 78 aa19.38■□□□□ 0.69
HMG20B-212ENST00000487894 SMIM10L2BP0DMW5 78 aa19.38■□□□□ 0.69
HMG20B-212ENST00000487894 PTPRSQ13332 1948 aa19.38■□□□□ 0.69
HMG20B-212ENST00000487894 C16orf59Q7L2K0 433 aa19.38■□□□□ 0.69
HMG20B-212ENST00000487894 EMSYQ7Z589 1322 aa19.38■□□□□ 0.69
HMG20B-212ENST00000487894 TBCKQ8TEA7 893 aa19.38■□□□□ 0.69
HMG20B-212ENST00000487894 WASF1Q92558 559 aa19.38■□□□□ 0.69
HMG20B-212ENST00000487894 LENG9Q96B70 501 aa19.38■□□□□ 0.69
HMG20B-212ENST00000487894 SCLYQ96I15 445 aa19.38■□□□□ 0.69
HMG20B-212ENST00000487894 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.38■□□□□ 0.69
HMG20B-212ENST00000487894 UPF2Q9HAU5 1272 aaKnown RBP19.38■□□□□ 0.69
HMG20B-212ENST00000487894 ZNF215Q9UL58 517 aaPredicted RBP19.38■□□□□ 0.69
HMG20B-212ENST00000487894 XBP1P17861 261 aa19.37■□□□□ 0.69
HMG20B-212ENST00000487894 ACTR2P61160 394 aa19.37■□□□□ 0.69
HMG20B-212ENST00000487894 ZNF200P98182 395 aaPredicted RBP19.37■□□□□ 0.69
HMG20B-212ENST00000487894 RABEP1Q15276 862 aa19.37■□□□□ 0.69
HMG20B-212ENST00000487894 PRR16Q569H4 304 aa19.37■□□□□ 0.69
HMG20B-212ENST00000487894 LRCH3Q96II8 777 aa19.37■□□□□ 0.69
HMG20B-212ENST00000487894 IL23AQ9NPF7 189 aa19.37■□□□□ 0.69
HMG20B-212ENST00000487894 GTF3C3Q9Y5Q9 886 aa19.37■□□□□ 0.69
HMG20B-212ENST00000487894 IPO5O00410 1097 aaKnown RBP19.36■□□□□ 0.69
HMG20B-212ENST00000487894 DHX15O43143 795 aaKnown RBP19.36■□□□□ 0.69
HMG20B-212ENST00000487894 LGR5O75473 907 aa19.36■□□□□ 0.69
HMG20B-212ENST00000487894 ACRP10323 421 aa19.36■□□□□ 0.69
HMG20B-212ENST00000487894 USP11P51784 963 aa19.36■□□□□ 0.69
HMG20B-212ENST00000487894 RBL2Q08999 1139 aa19.36■□□□□ 0.69
HMG20B-212ENST00000487894 TMEM240Q5SV17 173 aa19.36■□□□□ 0.69
HMG20B-212ENST00000487894 CCDC83Q8IWF9 413 aa19.36■□□□□ 0.69
HMG20B-212ENST00000487894 CAGE1Q8TC20 777 aa19.36■□□□□ 0.69
HMG20B-212ENST00000487894 OXER1Q8TDS5 423 aa19.36■□□□□ 0.69
HMG20B-212ENST00000487894 WNT8BQ93098 351 aa19.36■□□□□ 0.69
HMG20B-212ENST00000487894 VWCEQ96DN2 955 aa19.36■□□□□ 0.69
HMG20B-212ENST00000487894 TBC1D32Q96NH3 1257 aa19.36■□□□□ 0.69
HMG20B-212ENST00000487894 UIMC1Q96RL1 719 aa19.36■□□□□ 0.69
HMG20B-212ENST00000487894 PCYT2Q99447 389 aa19.36■□□□□ 0.69
HMG20B-212ENST00000487894 ZNF577Q9BSK1 485 aa19.36■□□□□ 0.69
HMG20B-212ENST00000487894 LOXHD1Q8IVV2 1947 aa19.35■□□□□ 0.69
HMG20B-212ENST00000487894 C17orf102A2RUQ5 167 aa19.35■□□□□ 0.69
HMG20B-212ENST00000487894 DDX39AO00148 427 aaKnown RBP19.35■□□□□ 0.69
HMG20B-212ENST00000487894 CCNE2O96020 404 aa19.35■□□□□ 0.69
HMG20B-212ENST00000487894 PTK7Q13308 1070 aa19.35■□□□□ 0.69
HMG20B-212ENST00000487894 BFSP2Q13515 415 aa19.35■□□□□ 0.69
HMG20B-212ENST00000487894 NONOQ15233 471 aaKnown RBP eCLIP19.35■□□□□ 0.69
HMG20B-212ENST00000487894 TRIM71Q2Q1W2 868 aaKnown RBP19.35■□□□□ 0.69
HMG20B-212ENST00000487894 PSRC1Q6PGN9 363 aaPredicted RBP19.35■□□□□ 0.69
HMG20B-212ENST00000487894 KRT25Q7Z3Z0 450 aa19.35■□□□□ 0.69
HMG20B-212ENST00000487894 CCDC155Q8N6L0 562 aa19.35■□□□□ 0.69
HMG20B-212ENST00000487894 RNPC3Q96LT9 517 aaKnown RBP19.35■□□□□ 0.69
HMG20B-212ENST00000487894 ZSCAN31Q96LW9 406 aaPredicted RBP19.35■□□□□ 0.69
HMG20B-212ENST00000487894 RNPEPQ9H4A4 650 aa19.35■□□□□ 0.69
HMG20B-212ENST00000487894 ATG7O95352 703 aa19.34■□□□□ 0.69
HMG20B-212ENST00000487894 TDP2O95551 362 aa19.34■□□□□ 0.69
HMG20B-212ENST00000487894 IQCF3P0C7M6 154 aa19.34■□□□□ 0.69
HMG20B-212ENST00000487894 MARK3P27448 753 aa19.34■□□□□ 0.69
HMG20B-212ENST00000487894 ZNF365Q70YC5 407 aa19.34■□□□□ 0.69
HMG20B-212ENST00000487894 SERINC5Q86VE9 423 aa19.34■□□□□ 0.69
HMG20B-212ENST00000487894 AFAP1L1Q8TED9 768 aa19.34■□□□□ 0.69
HMG20B-212ENST00000487894 GLG1Q92896 1179 aa19.34■□□□□ 0.69
HMG20B-212ENST00000487894 SMARCAD1Q9H4L7 1026 aa19.34■□□□□ 0.69
HMG20B-212ENST00000487894 SH2B1Q9NRF2 756 aaPredicted RBP19.34■□□□□ 0.69
HMG20B-212ENST00000487894 ERAP1Q9NZ08 941 aa19.34■□□□□ 0.69
HMG20B-212ENST00000487894 MICAL3Q7RTP6 2002 aa19.34■□□□□ 0.69
HMG20B-212ENST00000487894 IGKV6D-21A0A0A0MT36 114 aa19.33■□□□□ 0.68
HMG20B-212ENST00000487894 MSH4O15457 936 aa19.33■□□□□ 0.68
HMG20B-212ENST00000487894 TREHO43280 583 aa19.33■□□□□ 0.68
HMG20B-212ENST00000487894 ADAM17P78536 824 aa19.33■□□□□ 0.68
HMG20B-212ENST00000487894 INF2Q27J81 1249 aa19.33■□□□□ 0.68
HMG20B-212ENST00000487894 RASIP1Q5U651 963 aa19.33■□□□□ 0.68
HMG20B-212ENST00000487894 MOXD1Q6UVY6 613 aa19.33■□□□□ 0.68
HMG20B-212ENST00000487894 RETREG2Q8NC44 543 aa19.33■□□□□ 0.68
HMG20B-212ENST00000487894 LMBR1Q8WVP7 490 aa19.33■□□□□ 0.68
HMG20B-212ENST00000487894 TNFRSF25Q93038 417 aa19.33■□□□□ 0.68
HMG20B-212ENST00000487894 ATP6V0A1Q93050 837 aa19.33■□□□□ 0.68
HMG20B-212ENST00000487894 MBOAT7Q96N66 472 aa19.33■□□□□ 0.68
HMG20B-212ENST00000487894 TBC1D22BQ9NU19 505 aa19.33■□□□□ 0.68
HMG20B-212ENST00000487894 SETD4Q9NVD3 440 aa19.33■□□□□ 0.68
HMG20B-212ENST00000487894 EVPLQ92817 2033 aa19.33■□□□□ 0.68
HMG20B-212ENST00000487894 CYP3A7-CYP3A51PA0A087WV96 503 aa19.32■□□□□ 0.68
HMG20B-212ENST00000487894 CCDC194A0A1B0GVG4 234 aa19.32■□□□□ 0.68
HMG20B-212ENST00000487894 CKBP12277 381 aa19.32■□□□□ 0.68
HMG20B-212ENST00000487894 CYP3A7P24462 503 aa19.32■□□□□ 0.68
HMG20B-212ENST00000487894 RFC2P35250 354 aa19.32■□□□□ 0.68
HMG20B-212ENST00000487894 KRT2P35908 639 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms