RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 WRNIP1Q96S55 665 aa13.27□□□□□ -0.29
PKP4-213ENST00000486254 KCTD10Q9H3F6 313 aa13.27□□□□□ -0.29
PKP4-213ENST00000486254 TRMT1Q9NXH9 659 aaKnown RBP13.27□□□□□ -0.29
PKP4-213ENST00000486254 TRAF3IP3Q9Y228 551 aa13.27□□□□□ -0.29
PKP4-213ENST00000486254 COL4A3BPQ9Y5P4 624 aa13.27□□□□□ -0.29
PKP4-213ENST00000486254 ASTN2O75129 1339 aaPredicted RBP13.27□□□□□ -0.29
PKP4-213ENST00000486254 WDR90Q96KV7 1748 aa13.27□□□□□ -0.29
PKP4-213ENST00000486254 PTPRFP10586 1907 aa13.27□□□□□ -0.29
PKP4-213ENST00000486254 IPO5O00410 1097 aaKnown RBP13.26□□□□□ -0.29
PKP4-213ENST00000486254 EML1O00423 815 aa13.26□□□□□ -0.29
PKP4-213ENST00000486254 RIOK3O14730 519 aaKnown RBP13.26□□□□□ -0.29
PKP4-213ENST00000486254 EIF3DO15371 548 aaKnown RBP eCLIP13.26□□□□□ -0.29
PKP4-213ENST00000486254 TAL1P17542 331 aaPredicted RBP13.26□□□□□ -0.29
PKP4-213ENST00000486254 HNRNPH3P31942 346 aaKnown RBP13.26□□□□□ -0.29
PKP4-213ENST00000486254 MTIF2P46199 727 aaKnown RBP13.26□□□□□ -0.29
PKP4-213ENST00000486254 ZNF131P52739 623 aa13.26□□□□□ -0.29
PKP4-213ENST00000486254 PPP2R3AQ06190 1150 aa13.26□□□□□ -0.29
PKP4-213ENST00000486254 NFIL3Q16649 462 aa13.26□□□□□ -0.29
PKP4-213ENST00000486254 ZNF662Q6ZS27 426 aa13.26□□□□□ -0.29
PKP4-213ENST00000486254 REPS2Q8NFH8 660 aa13.26□□□□□ -0.29
PKP4-213ENST00000486254 RDM1Q8NG50 284 aa13.26□□□□□ -0.29
PKP4-213ENST00000486254 OR8K1Q8NGG5 319 aa13.26□□□□□ -0.29
PKP4-213ENST00000486254 TRPM4Q8TD43 1214 aa13.26□□□□□ -0.29
PKP4-213ENST00000486254 NACC1Q96RE7 527 aa13.26□□□□□ -0.29
PKP4-213ENST00000486254 ZNF577Q9BSK1 485 aa13.26□□□□□ -0.29
PKP4-213ENST00000486254 NOC4LQ9BVI4 516 aaKnown RBP13.26□□□□□ -0.29
PKP4-213ENST00000486254 SPON1Q9HCB6 807 aa13.26□□□□□ -0.29
PKP4-213ENST00000486254 GGA3Q9NZ52 723 aa13.26□□□□□ -0.29
PKP4-213ENST00000486254 ODF2LQ9ULJ1 636 aa13.26□□□□□ -0.29
PKP4-213ENST00000486254 LUC7L2Q9Y383 392 aaKnown RBP13.26□□□□□ -0.29
PKP4-213ENST00000486254 A0A0G2JMZ2 1700 aa13.25□□□□□ -0.29
PKP4-213ENST00000486254 NFIBO00712 420 aa13.25□□□□□ -0.29
PKP4-213ENST00000486254 PDXKO00764 312 aa13.25□□□□□ -0.29
PKP4-213ENST00000486254 MAFGO15525 162 aa13.25□□□□□ -0.29
PKP4-213ENST00000486254 SLITRK3O94933 977 aa13.25□□□□□ -0.29
PKP4-213ENST00000486254 SSBP05455 408 aaKnown RBP eCLIP13.25□□□□□ -0.29
PKP4-213ENST00000486254 KRT18P05783 430 aaKnown RBP13.25□□□□□ -0.29
PKP4-213ENST00000486254 KRT9P35527 623 aa13.25□□□□□ -0.29
PKP4-213ENST00000486254 ZBED6P86452 979 aa13.25□□□□□ -0.29
PKP4-213ENST00000486254 TBC1D8BQ0IIM8 1120 aa13.25□□□□□ -0.29
PKP4-213ENST00000486254 SPP2Q13103 211 aa13.25□□□□□ -0.29
PKP4-213ENST00000486254 VWA3BQ502W6 1294 aa13.25□□□□□ -0.29
PKP4-213ENST00000486254 HERC4Q5GLZ8 1057 aaPredicted RBP13.25□□□□□ -0.29
PKP4-213ENST00000486254 TRIM65Q6PJ69 517 aa13.25□□□□□ -0.29
PKP4-213ENST00000486254 MTERF4Q7Z6M4 381 aaKnown RBP13.25□□□□□ -0.29
PKP4-213ENST00000486254 SCFD1Q8WVM8 642 aa13.25□□□□□ -0.29
PKP4-213ENST00000486254 REEP2Q9BRK0 252 aa13.25□□□□□ -0.29
PKP4-213ENST00000486254 NDST4Q9H3R1 872 aa13.25□□□□□ -0.29
PKP4-213ENST00000486254 JADE2Q9NQC1 790 aa13.25□□□□□ -0.29
PKP4-213ENST00000486254 TBC1D22BQ9NU19 505 aa13.25□□□□□ -0.29
PKP4-213ENST00000486254 COL20A1Q9P218 1284 aa13.25□□□□□ -0.29
PKP4-213ENST00000486254 FAM184BQ9ULE4 1060 aa13.25□□□□□ -0.29
PKP4-213ENST00000486254 ADGRG1Q9Y653 693 aa13.25□□□□□ -0.29
PKP4-213ENST00000486254 COL11A1P12107 1806 aaPredicted RBP13.25□□□□□ -0.29
PKP4-213ENST00000486254 TTC26A0AVF1 554 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 B4DLN1 442 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 COBLO75128 1261 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 TBCAO75347 108 aaKnown RBP13.24□□□□□ -0.29
PKP4-213ENST00000486254 STAM2O75886 525 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 ITGB5P18084 799 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 GUCY2CP25092 1073 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 DSG3P32926 999 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 PABPC4Q13310 644 aaKnown RBP eCLIP13.24□□□□□ -0.29
PKP4-213ENST00000486254 C1orf186Q6ZWK4 172 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.24□□□□□ -0.29
PKP4-213ENST00000486254 HPS3Q969F9 1004 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 TIPINQ9BVW5 301 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 BHMT2Q9H2M3 363 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 ADARB2Q9NS39 739 aaKnown RBP13.24□□□□□ -0.29
PKP4-213ENST00000486254 KCNH7Q9NS40 1196 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 MYO1AQ9UBC5 1043 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 SIK3Q9Y2K2 1263 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 CTDP1Q9Y5B0 961 aaPredicted RBP13.24□□□□□ -0.29
PKP4-213ENST00000486254 ALAS1P13196 640 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 TRIM21P19474 475 aaKnown RBP13.24□□□□□ -0.29
PKP4-213ENST00000486254 PSMC6P62333 389 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 RPS6P62753 249 aaKnown RBP13.24□□□□□ -0.29
PKP4-213ENST00000486254 GOLGA8FQ08AF8 430 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 GOLGA8DPQ0D2H9 430 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 COG2Q14746 738 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 TSR1Q2NL82 804 aaKnown RBP13.24□□□□□ -0.29
PKP4-213ENST00000486254 RINT1Q6NUQ1 792 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 TOGARAM2Q6ZUX3 1019 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 STXBP4Q6ZWJ1 553 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 TMEM174Q8WUU8 243 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 UNC45AQ9H3U1 944 aa13.24□□□□□ -0.29
PKP4-213ENST00000486254 RAVER2Q9HCJ3 691 aaKnown RBP13.24□□□□□ -0.29
PKP4-213ENST00000486254 DBR1Q9UK59 544 aaKnown RBP13.24□□□□□ -0.29
PKP4-213ENST00000486254 SOWAHDA6NJG2 315 aa13.23□□□□□ -0.29
PKP4-213ENST00000486254 SLC16A3O15427 465 aaKnown RBP13.23□□□□□ -0.29
PKP4-213ENST00000486254 DHX15O43143 795 aaKnown RBP13.23□□□□□ -0.29
PKP4-213ENST00000486254 ARP10275 920 aa13.23□□□□□ -0.29
PKP4-213ENST00000486254 MAPTP10636 758 aaKnown RBP13.23□□□□□ -0.29
PKP4-213ENST00000486254 ALCAMQ13740 583 aa13.23□□□□□ -0.29
PKP4-213ENST00000486254 PGM5Q15124 567 aa13.23□□□□□ -0.29
PKP4-213ENST00000486254 PTPN21Q16825 1174 aa13.23□□□□□ -0.29
PKP4-213ENST00000486254 KNOP1Q1ED39 458 aaKnown RBP13.23□□□□□ -0.29
PKP4-213ENST00000486254 RAD9BQ6WBX8 426 aa13.23□□□□□ -0.29
PKP4-213ENST00000486254 RNF207Q6ZRF8 634 aa13.23□□□□□ -0.29
PKP4-213ENST00000486254 TRIM59Q8IWR1 403 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms