RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 SDF4Q9BRK5 362 aa17.84■□□□□ 0.45
APOE-205ENST00000485628 CCSER1Q9C0I3 900 aa17.84■□□□□ 0.45
APOE-205ENST00000485628 A6NJR5 290 aa17.83■□□□□ 0.44
APOE-205ENST00000485628 SLC26A4O43511 780 aa17.83■□□□□ 0.44
APOE-205ENST00000485628 SPATA31C1P0DKV0 1188 aa17.83■□□□□ 0.44
APOE-205ENST00000485628 SFNP31947 248 aa17.83■□□□□ 0.44
APOE-205ENST00000485628 ME1P48163 572 aa17.83■□□□□ 0.44
APOE-205ENST00000485628 GJA9P57773 515 aa17.83■□□□□ 0.44
APOE-205ENST00000485628 ACTR2P61160 394 aa17.83■□□□□ 0.44
APOE-205ENST00000485628 EPHA7Q15375 998 aa17.83■□□□□ 0.44
APOE-205ENST00000485628 CSPP1Q1MSJ5 1256 aa17.83■□□□□ 0.44
APOE-205ENST00000485628 DHX37Q8IY37 1157 aaKnown RBP17.83■□□□□ 0.44
APOE-205ENST00000485628 PPTC7Q8NI37 304 aa17.83■□□□□ 0.44
APOE-205ENST00000485628 SH3TC2Q8TF17 1288 aa17.83■□□□□ 0.44
APOE-205ENST00000485628 PCYT2Q99447 389 aa17.83■□□□□ 0.44
APOE-205ENST00000485628 PAK6Q9NQU5 681 aaPredicted RBP17.83■□□□□ 0.44
APOE-205ENST00000485628 PKD2L1Q9P0L9 805 aa17.83■□□□□ 0.44
APOE-205ENST00000485628 HPSEQ9Y251 543 aa17.83■□□□□ 0.44
APOE-205ENST00000485628 FRMPD3Q5JV73 1810 aa17.82■□□□□ 0.44
APOE-205ENST00000485628 GADD45BO75293 160 aaPredicted RBP17.82■□□□□ 0.44
APOE-205ENST00000485628 LGR5O75473 907 aa17.82■□□□□ 0.44
APOE-205ENST00000485628 RPA1P27694 616 aa17.82■□□□□ 0.44
APOE-205ENST00000485628 JAK3P52333 1124 aa17.82■□□□□ 0.44
APOE-205ENST00000485628 TMEM266Q2M3C6 531 aa17.82■□□□□ 0.44
APOE-205ENST00000485628 EPSTI1Q96J88 318 aa17.82■□□□□ 0.44
APOE-205ENST00000485628 POLR3CQ9BUI4 534 aaPredicted RBP17.82■□□□□ 0.44
APOE-205ENST00000485628 LRWD1Q9UFC0 647 aa17.82■□□□□ 0.44
APOE-205ENST00000485628 PCDHA10Q9Y5I2 948 aa17.82■□□□□ 0.44
APOE-205ENST00000485628 PP2D1A8MPX8 630 aa17.81■□□□□ 0.44
APOE-205ENST00000485628 WDR64B1ANS9 1081 aa17.81■□□□□ 0.44
APOE-205ENST00000485628 ADAMTS4O75173 837 aa17.81■□□□□ 0.44
APOE-205ENST00000485628 SLITRK3O94933 977 aa17.81■□□□□ 0.44
APOE-205ENST00000485628 STBD1O95210 358 aa17.81■□□□□ 0.44
APOE-205ENST00000485628 MUTP22033 750 aa17.81■□□□□ 0.44
APOE-205ENST00000485628 CST5P28325 142 aaPredicted RBP17.81■□□□□ 0.44
APOE-205ENST00000485628 CDC25AP30304 524 aa17.81■□□□□ 0.44
APOE-205ENST00000485628 MCM4P33991 863 aa17.81■□□□□ 0.44
APOE-205ENST00000485628 SPECC1Q5M775 1068 aa17.81■□□□□ 0.44
APOE-205ENST00000485628 CCSAPQ6IQ19 270 aaPredicted RBP17.81■□□□□ 0.44
APOE-205ENST00000485628 TLK2Q86UE8 772 aa17.81■□□□□ 0.44
APOE-205ENST00000485628 KLHDC9Q8NEP7 349 aa17.81■□□□□ 0.44
APOE-205ENST00000485628 AFAP1L1Q8TED9 768 aa17.81■□□□□ 0.44
APOE-205ENST00000485628 SEPT1Q8WYJ6 367 aa17.81■□□□□ 0.44
APOE-205ENST00000485628 SYMPKQ92797 1274 aaKnown RBP17.81■□□□□ 0.44
APOE-205ENST00000485628 LENG1Q96BZ8 264 aaPredicted RBP17.81■□□□□ 0.44
APOE-205ENST00000485628 ZNF333Q96JL9 665 aa17.81■□□□□ 0.44
APOE-205ENST00000485628 RAB34Q9BZG1 259 aa17.81■□□□□ 0.44
APOE-205ENST00000485628 MLXIPQ9HAP2 919 aa17.81■□□□□ 0.44
APOE-205ENST00000485628 HMX1Q9NP08 348 aaPredicted RBP17.81■□□□□ 0.44
APOE-205ENST00000485628 DISC1Q9NRI5 854 aa17.81■□□□□ 0.44
APOE-205ENST00000485628 DDX20Q9UHI6 824 aaKnown RBP17.81■□□□□ 0.44
APOE-205ENST00000485628 STK24Q9Y6E0 443 aa17.81■□□□□ 0.44
APOE-205ENST00000485628 BRCA2P51587 3418 aa17.81■□□□□ 0.44
APOE-205ENST00000485628 A0A087X0B3 334 aa17.8■□□□□ 0.44
APOE-205ENST00000485628 DDX39AO00148 427 aaKnown RBP17.8■□□□□ 0.44
APOE-205ENST00000485628 MARCH6O60337 910 aa17.8■□□□□ 0.44
APOE-205ENST00000485628 MSCO60682 206 aa17.8■□□□□ 0.44
APOE-205ENST00000485628 PPFIA4O75335 1185 aa17.8■□□□□ 0.44
APOE-205ENST00000485628 PRPF40AO75400 957 aaKnown RBP17.8■□□□□ 0.44
APOE-205ENST00000485628 LYPLA2O95372 231 aa17.8■□□□□ 0.44
APOE-205ENST00000485628 SUPT20HL2P0C7V6 817 aa17.8■□□□□ 0.44
APOE-205ENST00000485628 UBE2HP62256 183 aa17.8■□□□□ 0.44
APOE-205ENST00000485628 ECM1Q16610 540 aa17.8■□□□□ 0.44
APOE-205ENST00000485628 SLC9C1Q4G0N8 1177 aa17.8■□□□□ 0.44
APOE-205ENST00000485628 CATSPER3Q86XQ3 398 aa17.8■□□□□ 0.44
APOE-205ENST00000485628 KCTD17Q8N5Z5 321 aa17.8■□□□□ 0.44
APOE-205ENST00000485628 ENGASEQ8NFI3 743 aa17.8■□□□□ 0.44
APOE-205ENST00000485628 NEK9Q8TD19 979 aa17.8■□□□□ 0.44
APOE-205ENST00000485628 AFG1LQ8WV93 481 aa17.8■□□□□ 0.44
APOE-205ENST00000485628 SPATA33Q96N06 139 aa17.8■□□□□ 0.44
APOE-205ENST00000485628 PNMA5Q96PV4 448 aa17.8■□□□□ 0.44
APOE-205ENST00000485628 EIF2AK1Q9BQI3 630 aaKnown RBP17.8■□□□□ 0.44
APOE-205ENST00000485628 GOLPH3LQ9H4A5 285 aa17.8■□□□□ 0.44
APOE-205ENST00000485628 TUFT1Q9NNX1 390 aa17.8■□□□□ 0.44
APOE-205ENST00000485628 WRAP73Q9P2S5 460 aaPredicted RBP17.8■□□□□ 0.44
APOE-205ENST00000485628 MAFBQ9Y5Q3 323 aaPredicted RBP17.8■□□□□ 0.44
APOE-205ENST00000485628 MYH9P35579 1960 aaKnown RBP17.8■□□□□ 0.44
APOE-205ENST00000485628 EMSYQ7Z589 1322 aa17.79■□□□□ 0.44
APOE-205ENST00000485628 SYNRGQ9UMZ2 1314 aa17.79■□□□□ 0.44
APOE-205ENST00000485628 DYNC1LI2O43237 492 aaPredicted RBP17.79■□□□□ 0.44
APOE-205ENST00000485628 MED24O75448 989 aa17.79■□□□□ 0.44
APOE-205ENST00000485628 P4HBP07237 508 aaKnown RBP17.79■□□□□ 0.44
APOE-205ENST00000485628 IRX5P78411 483 aaPredicted RBP17.79■□□□□ 0.44
APOE-205ENST00000485628 GRB10Q13322 594 aa17.79■□□□□ 0.44
APOE-205ENST00000485628 SNW1Q13573 536 aaKnown RBP17.79■□□□□ 0.44
APOE-205ENST00000485628 MTFR1Q15390 333 aa17.79■□□□□ 0.44
APOE-205ENST00000485628 TMEM119Q4V9L6 283 aa17.79■□□□□ 0.44
APOE-205ENST00000485628 MIER3Q7Z3K6 550 aa17.79■□□□□ 0.44
APOE-205ENST00000485628 OR6J1Q8NGC5 347 aa17.79■□□□□ 0.44
APOE-205ENST00000485628 LRRC15Q8TF66 581 aa17.79■□□□□ 0.44
APOE-205ENST00000485628 C16orf70Q9BSU1 422 aa17.79■□□□□ 0.44
APOE-205ENST00000485628 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.79■□□□□ 0.445e-7■■■■■ 39.7
APOE-205ENST00000485628 UNC93B1Q9H1C4 597 aa17.79■□□□□ 0.44
APOE-205ENST00000485628 IGSF9BQ9UPX0 1349 aa17.78■□□□□ 0.44
APOE-205ENST00000485628 ZNF862O60290 1169 aa17.78■□□□□ 0.44
APOE-205ENST00000485628 MMP3P08254 477 aa17.78■□□□□ 0.44
APOE-205ENST00000485628 RARBP10826 455 aa17.78■□□□□ 0.44
APOE-205ENST00000485628 ATP4AP20648 1035 aa17.78■□□□□ 0.44
APOE-205ENST00000485628 E2F4Q16254 413 aa17.78■□□□□ 0.44
APOE-205ENST00000485628 UGCGQ16739 394 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms