RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 GFRA3O60609 400 aa12.65□□□□□ -0.38
SMARCC1-205ENST00000483847 KDM4AO75164 1064 aa12.65□□□□□ -0.38
SMARCC1-205ENST00000483847 GHRP10912 638 aa12.65□□□□□ -0.38
SMARCC1-205ENST00000483847 PCP11498 1178 aaKnown RBP12.65□□□□□ -0.38
SMARCC1-205ENST00000483847 RRP1P56182 461 aaKnown RBP12.65□□□□□ -0.38
SMARCC1-205ENST00000483847 ADAM17P78536 824 aa12.65□□□□□ -0.38
SMARCC1-205ENST00000483847 BTG3Q14201 252 aaPredicted RBP12.65□□□□□ -0.38
SMARCC1-205ENST00000483847 STAG2Q8N3U4 1231 aa12.65□□□□□ -0.38
SMARCC1-205ENST00000483847 LMBR1Q8WVP7 490 aa12.65□□□□□ -0.38
SMARCC1-205ENST00000483847 ZNF689Q96CS4 500 aaPredicted RBP12.65□□□□□ -0.38
SMARCC1-205ENST00000483847 AMNQ9BXJ7 453 aa12.65□□□□□ -0.38
SMARCC1-205ENST00000483847 KAT14Q9H8E8 782 aa12.65□□□□□ -0.38
SMARCC1-205ENST00000483847 PLAGL2Q9UPG8 496 aa12.65□□□□□ -0.38
SMARCC1-205ENST00000483847 RWDD3Q9Y3V2 267 aa12.65□□□□□ -0.38
SMARCC1-205ENST00000483847 LAMA4Q16363 1823 aa12.65□□□□□ -0.39
SMARCC1-205ENST00000483847 ENPP3O14638 875 aa12.64□□□□□ -0.39
SMARCC1-205ENST00000483847 PARP1P09874 1014 aaKnown RBP12.64□□□□□ -0.39
SMARCC1-205ENST00000483847 TGFB3P10600 412 aa12.64□□□□□ -0.39
SMARCC1-205ENST00000483847 ARHGAP4P98171 946 aa12.64□□□□□ -0.39
SMARCC1-205ENST00000483847 LPIN1Q14693 890 aa12.64□□□□□ -0.39
SMARCC1-205ENST00000483847 CBX2Q14781 532 aaPredicted RBP12.64□□□□□ -0.39
SMARCC1-205ENST00000483847 RUFY4Q6ZNE9 571 aa12.64□□□□□ -0.39
SMARCC1-205ENST00000483847 ENAHQ8N8S7 591 aaPredicted RBP12.64□□□□□ -0.39
SMARCC1-205ENST00000483847 SMRP1Q8NCR6 262 aa12.64□□□□□ -0.39
SMARCC1-205ENST00000483847 RNF41Q9H4P4 317 aaPredicted RBP12.64□□□□□ -0.39
SMARCC1-205ENST00000483847 EHMT1Q9H9B1 1298 aa12.64□□□□□ -0.39
SMARCC1-205ENST00000483847 BARX2Q9UMQ3 279 aaPredicted RBP12.64□□□□□ -0.39
SMARCC1-205ENST00000483847 USP15Q9Y4E8 981 aaPredicted RBP12.64□□□□□ -0.39
SMARCC1-205ENST00000483847 PCDHGC5Q9Y5F6 944 aa12.64□□□□□ -0.39
SMARCC1-205ENST00000483847 MRPL42Q9Y6G3 142 aaKnown RBP12.64□□□□□ -0.39
SMARCC1-205ENST00000483847 WDR87Q6ZQQ6 2873 aa12.64□□□□□ -0.39
SMARCC1-205ENST00000483847 TTC3P53804 2025 aa12.64□□□□□ -0.39
SMARCC1-205ENST00000483847 PLXNA3P51805 1871 aa12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 B4E1Z4 1266 aa12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 NOP56O00567 594 aaKnown RBP12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 DGKIO75912 1065 aa12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 GLP2RO95838 553 aa12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 ITGB1P05556 798 aa12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 CCND2P30279 289 aa12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 SEMA3FQ13275 785 aa12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 PKN1Q16512 942 aa12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 SLC35G1Q2M3R5 365 aa12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 UTP14CQ5TAP6 766 aaKnown RBP12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 CYFIP1Q7L576 1253 aa12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 RBM23Q86U06 439 aaKnown RBP12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 FCHSD1Q86WN1 690 aa12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 EFHBQ8N7U6 833 aa12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 SPPL3Q8TCT6 385 aa12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 LINC01599Q8WXQ3 324 aa12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 ASIC4Q96FT7 647 aa12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 ZSCAN10Q96SZ4 725 aaPredicted RBP12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 GPR20Q99678 358 aa12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 PRRX2Q99811 253 aa12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 USP26Q9BXU7 913 aa12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 PCDHA1Q9Y5I3 950 aa12.63□□□□□ -0.39
SMARCC1-205ENST00000483847 PLXNA4Q9HCM2 1894 aa12.62□□□□□ -0.39
SMARCC1-205ENST00000483847 TRIM6-TRIM34B2RNG4 842 aa12.62□□□□□ -0.39
SMARCC1-205ENST00000483847 GNAT1P11488 350 aa12.62□□□□□ -0.39
SMARCC1-205ENST00000483847 NRIP1P48552 1158 aa12.62□□□□□ -0.39
SMARCC1-205ENST00000483847 MRPS9P82933 396 aaKnown RBP12.62□□□□□ -0.39
SMARCC1-205ENST00000483847 RBM10P98175 930 aaKnown RBP12.62□□□□□ -0.39
SMARCC1-205ENST00000483847 MGAT3Q09327 533 aa12.62□□□□□ -0.39
SMARCC1-205ENST00000483847 COASYQ13057 564 aa12.62□□□□□ -0.39
SMARCC1-205ENST00000483847 IQCA1Q86XH1 822 aa12.62□□□□□ -0.39
SMARCC1-205ENST00000483847 KLHL23Q8NBE8 558 aa12.62□□□□□ -0.39
SMARCC1-205ENST00000483847 P2RX5Q93086 422 aa12.62□□□□□ -0.39
SMARCC1-205ENST00000483847 MTMR8Q96EF0 704 aa12.62□□□□□ -0.39
SMARCC1-205ENST00000483847 RPGRIP1Q96KN7 1286 aa12.62□□□□□ -0.39
SMARCC1-205ENST00000483847 PLVAPQ9BX97 442 aa12.62□□□□□ -0.39
SMARCC1-205ENST00000483847 MAP3K20Q9NYL2 800 aaKnown RBP12.62□□□□□ -0.39
SMARCC1-205ENST00000483847 DMDP11532 3685 aa12.61□□□□□ -0.39
SMARCC1-205ENST00000483847 SPATA31C2B4DYI2 1134 aa12.61□□□□□ -0.39
SMARCC1-205ENST00000483847 KLRF2D3W0D1 207 aa12.61□□□□□ -0.39
SMARCC1-205ENST00000483847 ZNF213O14771 459 aa12.61□□□□□ -0.39
SMARCC1-205ENST00000483847 ZBTB5O15062 677 aa12.61□□□□□ -0.39
SMARCC1-205ENST00000483847 PDGFBP01127 241 aaPredicted RBP12.61□□□□□ -0.39
SMARCC1-205ENST00000483847 AVPR2P30518 371 aa12.61□□□□□ -0.39
SMARCC1-205ENST00000483847 PDE1AP54750 535 aa12.61□□□□□ -0.39
SMARCC1-205ENST00000483847 SP4Q02446 784 aa12.61□□□□□ -0.39
SMARCC1-205ENST00000483847 SIGLEC14Q08ET2 396 aa12.61□□□□□ -0.39
SMARCC1-205ENST00000483847 PAN2Q504Q3 1202 aaKnown RBP12.61□□□□□ -0.39
SMARCC1-205ENST00000483847 METTL7BQ6UX53 244 aa12.61□□□□□ -0.39
SMARCC1-205ENST00000483847 RTN4RL1Q86UN2 441 aaPredicted RBP12.61□□□□□ -0.39
SMARCC1-205ENST00000483847 CRIPAKQ8N1N5 446 aa12.61□□□□□ -0.39
SMARCC1-205ENST00000483847 ATOH1Q92858 354 aaPredicted RBP12.61□□□□□ -0.39
SMARCC1-205ENST00000483847 AGO3Q9H9G7 860 aaKnown RBP12.61□□□□□ -0.39
SMARCC1-205ENST00000483847 RTEL1Q9NZ71 1219 aa12.61□□□□□ -0.39
SMARCC1-205ENST00000483847 ZSWIM5Q9P217 1185 aa12.61□□□□□ -0.39
SMARCC1-205ENST00000483847 VPS13AQ96RL7 3174 aa12.61□□□□□ -0.39
SMARCC1-205ENST00000483847 H0Y858 1186 aa12.6□□□□□ -0.39
SMARCC1-205ENST00000483847 GCOM1H8Y6P7 765 aaPredicted RBP12.6□□□□□ -0.39
SMARCC1-205ENST00000483847 POLR2MP0CAP2 368 aa12.6□□□□□ -0.39
SMARCC1-205ENST00000483847 ICAM3P32942 547 aa12.6□□□□□ -0.39
SMARCC1-205ENST00000483847 GATMP50440 423 aa12.6□□□□□ -0.39
SMARCC1-205ENST00000483847 CCDC178Q5BJE1 867 aa12.6□□□□□ -0.39
SMARCC1-205ENST00000483847 FBXO47Q5MNV8 452 aa12.6□□□□□ -0.39
SMARCC1-205ENST00000483847 ANKRD45Q5TZF3 282 aa12.6□□□□□ -0.39
SMARCC1-205ENST00000483847 HOMER1Q86YM7 354 aa12.6□□□□□ -0.39
SMARCC1-205ENST00000483847 CMTR2Q8IYT2 770 aaKnown RBP12.6□□□□□ -0.39
SMARCC1-205ENST00000483847 VN1R2Q8NFZ6 395 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms