RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 PTK7Q13308 1070 aa17.18■□□□□ 0.34
COL16A1-213ENST00000482910 ITGB3BPQ13352 177 aaPredicted RBP17.18■□□□□ 0.34
COL16A1-213ENST00000482910 C9orf50Q5SZB4 431 aa17.18■□□□□ 0.34
COL16A1-213ENST00000482910 PSRC1Q6PGN9 363 aaPredicted RBP17.18■□□□□ 0.34
COL16A1-213ENST00000482910 MOXD1Q6UVY6 613 aa17.18■□□□□ 0.34
COL16A1-213ENST00000482910 KRT25Q7Z3Z0 450 aa17.18■□□□□ 0.34
COL16A1-213ENST00000482910 PPP1R13LQ8WUF5 828 aa17.18■□□□□ 0.34
COL16A1-213ENST00000482910 SMARCAD1Q9H4L7 1026 aa17.18■□□□□ 0.34
COL16A1-213ENST00000482910 SH2B1Q9NRF2 756 aaPredicted RBP17.18■□□□□ 0.34
COL16A1-213ENST00000482910 PKD2L1Q9P0L9 805 aa17.18■□□□□ 0.34
COL16A1-213ENST00000482910 TELO2Q9Y4R8 837 aa17.18■□□□□ 0.34
COL16A1-213ENST00000482910 LAMA3Q16787 3333 aa17.17■□□□□ 0.34
COL16A1-213ENST00000482910 IPO5O00410 1097 aaKnown RBP17.17■□□□□ 0.34
COL16A1-213ENST00000482910 EDIL3O43854 480 aa17.17■□□□□ 0.34
COL16A1-213ENST00000482910 ATG7O95352 703 aa17.17■□□□□ 0.34
COL16A1-213ENST00000482910 PARNO95453 639 aaKnown RBP17.17■□□□□ 0.34
COL16A1-213ENST00000482910 SMIM10L2AP0DMW4 78 aa17.17■□□□□ 0.34
COL16A1-213ENST00000482910 SMIM10L2BP0DMW5 78 aa17.17■□□□□ 0.34
COL16A1-213ENST00000482910 GNAT1P11488 350 aa17.17■□□□□ 0.34
COL16A1-213ENST00000482910 TMEM240Q5SV17 173 aa17.17■□□□□ 0.34
COL16A1-213ENST00000482910 UTP14CQ5TAP6 766 aaKnown RBP17.17■□□□□ 0.34
COL16A1-213ENST00000482910 TRIM50Q86XT4 487 aa17.17■□□□□ 0.34
COL16A1-213ENST00000482910 RPUSD2Q8IZ73 545 aaKnown RBP17.17■□□□□ 0.34
COL16A1-213ENST00000482910 RETREG2Q8NC44 543 aa17.17■□□□□ 0.34
COL16A1-213ENST00000482910 TBCKQ8TEA7 893 aa17.17■□□□□ 0.34
COL16A1-213ENST00000482910 AFAP1L1Q8TED9 768 aa17.17■□□□□ 0.34
COL16A1-213ENST00000482910 LENG9Q96B70 501 aa17.17■□□□□ 0.34
COL16A1-213ENST00000482910 LLPHQ9BRT6 129 aaKnown RBP17.17■□□□□ 0.34
COL16A1-213ENST00000482910 TBC1D22BQ9NU19 505 aa17.17■□□□□ 0.34
COL16A1-213ENST00000482910 ERAP1Q9NZ08 941 aa17.17■□□□□ 0.34
COL16A1-213ENST00000482910 CYP3A7-CYP3A51PA0A087WV96 503 aa17.16■□□□□ 0.34
COL16A1-213ENST00000482910 C17orf102A2RUQ5 167 aa17.16■□□□□ 0.34
COL16A1-213ENST00000482910 DHX15O43143 795 aaKnown RBP17.16■□□□□ 0.34
COL16A1-213ENST00000482910 CYP3A7P24462 503 aa17.16■□□□□ 0.34
COL16A1-213ENST00000482910 CCL23P55773 120 aa17.16■□□□□ 0.34
COL16A1-213ENST00000482910 ACTR2P61160 394 aa17.16■□□□□ 0.34
COL16A1-213ENST00000482910 ST3GAL1Q11201 340 aa17.16■□□□□ 0.34
COL16A1-213ENST00000482910 NONOQ15233 471 aaKnown RBP eCLIP17.16■□□□□ 0.34
COL16A1-213ENST00000482910 C16orf59Q7L2K0 433 aa17.16■□□□□ 0.34
COL16A1-213ENST00000482910 SERINC5Q86VE9 423 aa17.16■□□□□ 0.34
COL16A1-213ENST00000482910 DHX38Q92620 1227 aaKnown RBP17.16■□□□□ 0.34
COL16A1-213ENST00000482910 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.16■□□□□ 0.343e-6■■■■■ 44.4
COL16A1-213ENST00000482910 ZNF577Q9BSK1 485 aa17.16■□□□□ 0.34
COL16A1-213ENST00000482910 RNPEPQ9H4A4 650 aa17.16■□□□□ 0.34
COL16A1-213ENST00000482910 KCNJ14Q9UNX9 436 aa17.16■□□□□ 0.34
COL16A1-213ENST00000482910 NRCAMQ92823 1304 aa17.16■□□□□ 0.34
COL16A1-213ENST00000482910 IGKV6D-21A0A0A0MT36 114 aa17.15■□□□□ 0.34
COL16A1-213ENST00000482910 SOX1O00570 391 aaPredicted RBP17.15■□□□□ 0.34
COL16A1-213ENST00000482910 IQCF3P0C7M6 154 aa17.15■□□□□ 0.34
COL16A1-213ENST00000482910 SLC26A2P50443 739 aa17.15■□□□□ 0.34
COL16A1-213ENST00000482910 ADAM17P78536 824 aa17.15■□□□□ 0.34
COL16A1-213ENST00000482910 HIC1Q14526 733 aa17.15■□□□□ 0.34
COL16A1-213ENST00000482910 Q4G0T1 1027 aa17.15■□□□□ 0.34
COL16A1-213ENST00000482910 PRR16Q569H4 304 aa17.15■□□□□ 0.34
COL16A1-213ENST00000482910 RASIP1Q5U651 963 aa17.15■□□□□ 0.34
COL16A1-213ENST00000482910 ZNF746Q6NUN9 644 aaPredicted RBP17.15■□□□□ 0.34
COL16A1-213ENST00000482910 PLPPR4Q7Z2D5 763 aa17.15■□□□□ 0.34
COL16A1-213ENST00000482910 TNPO1Q92973 898 aaKnown RBP17.15■□□□□ 0.34
COL16A1-213ENST00000482910 RNPC3Q96LT9 517 aaKnown RBP17.15■□□□□ 0.34
COL16A1-213ENST00000482910 MBOAT7Q96N66 472 aa17.15■□□□□ 0.34
COL16A1-213ENST00000482910 AZI2Q9H6S1 392 aa17.15■□□□□ 0.34
COL16A1-213ENST00000482910 CCDC194A0A1B0GVG4 234 aa17.14■□□□□ 0.33
COL16A1-213ENST00000482910 ST18O60284 1047 aa17.14■□□□□ 0.33
COL16A1-213ENST00000482910 CAND2O75155 1236 aa17.14■□□□□ 0.33
COL16A1-213ENST00000482910 SELPP16109 830 aa17.14■□□□□ 0.33
COL16A1-213ENST00000482910 KRT76Q01546 638 aa17.14■□□□□ 0.33
COL16A1-213ENST00000482910 TRIM71Q2Q1W2 868 aaKnown RBP17.14■□□□□ 0.33
COL16A1-213ENST00000482910 ZNF365Q70YC5 407 aa17.14■□□□□ 0.33
COL16A1-213ENST00000482910 SMAP1Q8IYB5 467 aaPredicted RBP17.14■□□□□ 0.33
COL16A1-213ENST00000482910 HERVK_113Q902F9 699 aa17.14■□□□□ 0.33
COL16A1-213ENST00000482910 GLG1Q92896 1179 aa17.14■□□□□ 0.33
COL16A1-213ENST00000482910 ATP6V0A1Q93050 837 aa17.14■□□□□ 0.33
COL16A1-213ENST00000482910 SCLYQ96I15 445 aa17.14■□□□□ 0.33
COL16A1-213ENST00000482910 TBC1D32Q96NH3 1257 aa17.14■□□□□ 0.33
COL16A1-213ENST00000482910 PCYT2Q99447 389 aa17.14■□□□□ 0.33
COL16A1-213ENST00000482910 RIT2Q99578 217 aa17.14■□□□□ 0.33
COL16A1-213ENST00000482910 MTIF3Q9H2K0 278 aaKnown RBP17.14■□□□□ 0.33
COL16A1-213ENST00000482910 BRMS1Q9HCU9 246 aa17.14■□□□□ 0.33
COL16A1-213ENST00000482910 TCEAL9Q9UHQ7 104 aa17.14■□□□□ 0.33
COL16A1-213ENST00000482910 SCN5AQ14524 2016 aa17.14■□□□□ 0.33
COL16A1-213ENST00000482910 JAK2O60674 1132 aa17.13■□□□□ 0.33
COL16A1-213ENST00000482910 CCNE2O96020 404 aa17.13■□□□□ 0.33
COL16A1-213ENST00000482910 FGBP02675 491 aa17.13■□□□□ 0.33
COL16A1-213ENST00000482910 CKBP12277 381 aa17.13■□□□□ 0.33
COL16A1-213ENST00000482910 HMGN5P82970 282 aaKnown RBP17.13■□□□□ 0.33
COL16A1-213ENST00000482910 SMAD3P84022 425 aaKnown RBP17.13■□□□□ 0.33
COL16A1-213ENST00000482910 ZNF200P98182 395 aaPredicted RBP17.13■□□□□ 0.33
COL16A1-213ENST00000482910 ABHD15Q6UXT9 468 aa17.13■□□□□ 0.33
COL16A1-213ENST00000482910 LRRC8DQ7L1W4 858 aa17.13■□□□□ 0.33
COL16A1-213ENST00000482910 LMBR1Q8WVP7 490 aa17.13■□□□□ 0.33
COL16A1-213ENST00000482910 VWCEQ96DN2 955 aa17.13■□□□□ 0.33
COL16A1-213ENST00000482910 LRCH3Q96II8 777 aa17.13■□□□□ 0.33
COL16A1-213ENST00000482910 NAP1L4Q99733 375 aaKnown RBP17.13■□□□□ 0.33
COL16A1-213ENST00000482910 GJB4Q9NTQ9 266 aa17.13■□□□□ 0.33
COL16A1-213ENST00000482910 MYH9P35579 1960 aaKnown RBP17.13■□□□□ 0.33
COL16A1-213ENST00000482910 MSH4O15457 936 aa17.12■□□□□ 0.33
COL16A1-213ENST00000482910 TREHO43280 583 aa17.12■□□□□ 0.33
COL16A1-213ENST00000482910 MMP1P03956 469 aa17.12■□□□□ 0.33
COL16A1-213ENST00000482910 ACRP10323 421 aa17.12■□□□□ 0.33
COL16A1-213ENST00000482910 GCFC2P16383 781 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms