RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 SMIM10L2AP0DMW4 78 aa11.95□□□□□ -0.5
DDX39B-220ENST00000482195 SMIM10L2BP0DMW5 78 aa11.95□□□□□ -0.5
DDX39B-220ENST00000482195 LEXMQ3ZCV2 418 aa11.95□□□□□ -0.5
DDX39B-220ENST00000482195 MYSM1Q5VVJ2 828 aa11.95□□□□□ -0.5
DDX39B-220ENST00000482195 SERINC5Q86VE9 423 aa11.95□□□□□ -0.5
DDX39B-220ENST00000482195 GJD3Q8N144 294 aa11.95□□□□□ -0.5
DDX39B-220ENST00000482195 SEPT8Q92599 483 aa11.95□□□□□ -0.5
DDX39B-220ENST00000482195 ANKS1AQ92625 1134 aa11.95□□□□□ -0.5
DDX39B-220ENST00000482195 GPKOWQ92917 476 aaPredicted RBP eCLIP11.95□□□□□ -0.5
DDX39B-220ENST00000482195 CD320Q9NPF0 282 aa11.95□□□□□ -0.5
DDX39B-220ENST00000482195 CTNNA3Q9UI47 895 aa11.95□□□□□ -0.5
DDX39B-220ENST00000482195 PCDHGA10Q9Y5H3 936 aa11.95□□□□□ -0.5
DDX39B-220ENST00000482195 H3BQ06 376 aaPredicted RBP11.94□□□□□ -0.5
DDX39B-220ENST00000482195 GPR37L1O60883 481 aa11.94□□□□□ -0.5
DDX39B-220ENST00000482195 PPP1R11O60927 126 aaPredicted RBP11.94□□□□□ -0.5
DDX39B-220ENST00000482195 PPFIA4O75335 1185 aa11.94□□□□□ -0.5
DDX39B-220ENST00000482195 RGS20O76081 388 aa11.94□□□□□ -0.5
DDX39B-220ENST00000482195 LGALS2P05162 132 aa11.94□□□□□ -0.5
DDX39B-220ENST00000482195 HOXD8P13378 290 aaPredicted RBP11.94□□□□□ -0.5
DDX39B-220ENST00000482195 SP2Q02086 613 aa11.94□□□□□ -0.5
DDX39B-220ENST00000482195 SP4Q02446 784 aa11.94□□□□□ -0.5
DDX39B-220ENST00000482195 GPM6BQ13491 265 aa11.94□□□□□ -0.5
DDX39B-220ENST00000482195 CSPP1Q1MSJ5 1256 aa11.94□□□□□ -0.5
DDX39B-220ENST00000482195 EPC2Q52LR7 807 aa11.94□□□□□ -0.5
DDX39B-220ENST00000482195 PIBF1Q8WXW3 757 aa11.94□□□□□ -0.5
DDX39B-220ENST00000482195 MRPL38Q96DV4 380 aaKnown RBP11.94□□□□□ -0.5
DDX39B-220ENST00000482195 DSCC1Q9BVC3 393 aa11.94□□□□□ -0.5
DDX39B-220ENST00000482195 C11orf16Q9NQ32 467 aa11.94□□□□□ -0.5
DDX39B-220ENST00000482195 MAD2L2Q9UI95 211 aa11.94□□□□□ -0.5
DDX39B-220ENST00000482195 PCDHGA4Q9Y5G9 962 aa11.94□□□□□ -0.5
DDX39B-220ENST00000482195 LOXHD1Q8IVV2 1947 aa11.94□□□□□ -0.5
DDX39B-220ENST00000482195 KIAA1671Q9BY89 1806 aa11.93□□□□□ -0.5
DDX39B-220ENST00000482195 PI4K2BG5E9Z4 385 aa11.93□□□□□ -0.5
DDX39B-220ENST00000482195 H3BRB1 525 aa11.93□□□□□ -0.5
DDX39B-220ENST00000482195 TREHO43280 583 aa11.93□□□□□ -0.5
DDX39B-220ENST00000482195 TRDNQ13061 729 aa11.93□□□□□ -0.5
DDX39B-220ENST00000482195 GNPTABQ3T906 1256 aa11.93□□□□□ -0.5
DDX39B-220ENST00000482195 PLEKHG4Q58EX7 1191 aa11.93□□□□□ -0.5
DDX39B-220ENST00000482195 UTP14CQ5TAP6 766 aaKnown RBP11.93□□□□□ -0.5
DDX39B-220ENST00000482195 STOX1Q6ZVD7 989 aa11.93□□□□□ -0.5
DDX39B-220ENST00000482195 VSIG10LQ86VR7 867 aa11.93□□□□□ -0.5
DDX39B-220ENST00000482195 CHD1LQ86WJ1 897 aa11.93□□□□□ -0.5
DDX39B-220ENST00000482195 PLEKHM2Q8IWE5 1019 aa11.93□□□□□ -0.5
DDX39B-220ENST00000482195 FAM178BQ8IXR5 827 aa11.93□□□□□ -0.5
DDX39B-220ENST00000482195 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.93□□□□□ -0.5
DDX39B-220ENST00000482195 SAMD11Q96NU1 681 aa11.93□□□□□ -0.5
DDX39B-220ENST00000482195 PIGSQ96S52 555 aa11.93□□□□□ -0.5
DDX39B-220ENST00000482195 C16orf70Q9BSU1 422 aa11.93□□□□□ -0.5
DDX39B-220ENST00000482195 IFIH1Q9BYX4 1025 aaKnown RBP11.93□□□□□ -0.5
DDX39B-220ENST00000482195 RWDD1Q9H446 243 aaPredicted RBP11.93□□□□□ -0.5
DDX39B-220ENST00000482195 TUT1Q9H6E5 874 aaKnown RBP11.93□□□□□ -0.5
DDX39B-220ENST00000482195 PIEZO1Q92508 2521 aa11.92□□□□□ -0.5
DDX39B-220ENST00000482195 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.92□□□□□ -0.5
DDX39B-220ENST00000482195 ERICH2A1L162 156 aa11.92□□□□□ -0.5
DDX39B-220ENST00000482195 GNAT1P11488 350 aa11.92□□□□□ -0.5
DDX39B-220ENST00000482195 CTNNB1P35222 781 aa11.92□□□□□ -0.5
DDX39B-220ENST00000482195 HTRA4P83105 476 aaPredicted RBP11.92□□□□□ -0.5
DDX39B-220ENST00000482195 ARHGAP4P98171 946 aa11.92□□□□□ -0.5
DDX39B-220ENST00000482195 TRAF1Q13077 416 aa11.92□□□□□ -0.5
DDX39B-220ENST00000482195 TCEAL5Q5H9L2 206 aa11.92□□□□□ -0.5
DDX39B-220ENST00000482195 POTEHQ6S545 545 aa11.92□□□□□ -0.5
DDX39B-220ENST00000482195 CYB5R4Q7L1T6 521 aa11.92□□□□□ -0.5
DDX39B-220ENST00000482195 CYFIP1Q7L576 1253 aa11.92□□□□□ -0.5
DDX39B-220ENST00000482195 TRIM50Q86XT4 487 aa11.92□□□□□ -0.5
DDX39B-220ENST00000482195 TMEM192Q8IY95 271 aa11.92□□□□□ -0.5
DDX39B-220ENST00000482195 BANK1Q8NDB2 785 aa11.92□□□□□ -0.5
DDX39B-220ENST00000482195 SP7Q8TDD2 431 aaPredicted RBP11.92□□□□□ -0.5
DDX39B-220ENST00000482195 REPIN1Q9BWE0 567 aaKnown RBP11.92□□□□□ -0.5
DDX39B-220ENST00000482195 NSUN3Q9H649 340 aaKnown RBP11.92□□□□□ -0.5
DDX39B-220ENST00000482195 SETD4Q9NVD3 440 aa11.92□□□□□ -0.5
DDX39B-220ENST00000482195 CLDND1Q9NY35 253 aa11.92□□□□□ -0.5
DDX39B-220ENST00000482195 MAP3K20Q9NYL2 800 aaKnown RBP11.92□□□□□ -0.5
DDX39B-220ENST00000482195 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.92□□□□□ -0.5
DDX39B-220ENST00000482195 ZNF215Q9UL58 517 aaPredicted RBP11.92□□□□□ -0.5
DDX39B-220ENST00000482195 FAM50BQ9Y247 325 aa11.92□□□□□ -0.5
DDX39B-220ENST00000482195 COL4A6Q14031 1691 aa11.91□□□□□ -0.5
DDX39B-220ENST00000482195 PRR33A8MZF0 331 aa11.91□□□□□ -0.5
DDX39B-220ENST00000482195 IFIT3O14879 490 aaKnown RBP11.91□□□□□ -0.5
DDX39B-220ENST00000482195 MAP3K7O43318 606 aa11.91□□□□□ -0.5
DDX39B-220ENST00000482195 CAND2O75155 1236 aa11.91□□□□□ -0.5
DDX39B-220ENST00000482195 TGFB3P10600 412 aa11.91□□□□□ -0.5
DDX39B-220ENST00000482195 ALADP13716 330 aa11.91□□□□□ -0.5
DDX39B-220ENST00000482195 GHRHRQ02643 423 aa11.91□□□□□ -0.5
DDX39B-220ENST00000482195 NEDD9Q14511 834 aa11.91□□□□□ -0.5
DDX39B-220ENST00000482195 GRM4Q14833 912 aa11.91□□□□□ -0.5
DDX39B-220ENST00000482195 CLUL1Q15846 466 aa11.91□□□□□ -0.5
DDX39B-220ENST00000482195 PUS10Q3MIT2 529 aaKnown RBP11.91□□□□□ -0.5
DDX39B-220ENST00000482195 SAMD3Q8N6K7 520 aa11.91□□□□□ -0.5
DDX39B-220ENST00000482195 MTMR8Q96EF0 704 aa11.91□□□□□ -0.5
DDX39B-220ENST00000482195 RNPEPQ9H4A4 650 aa11.91□□□□□ -0.5
DDX39B-220ENST00000482195 BCAS3Q9H6U6 928 aa11.91□□□□□ -0.5
DDX39B-220ENST00000482195 RTEL1Q9NZ71 1219 aa11.91□□□□□ -0.5
DDX39B-220ENST00000482195 PALM3A6NDB9 673 aaPredicted RBP11.9□□□□□ -0.5
DDX39B-220ENST00000482195 H3BNC9 293 aa11.9□□□□□ -0.5
DDX39B-220ENST00000482195 SEC23AQ15436 765 aa11.9□□□□□ -0.5
DDX39B-220ENST00000482195 METTL7BQ6UX53 244 aa11.9□□□□□ -0.5
DDX39B-220ENST00000482195 RALYLQ86SE5 291 aaKnown RBP11.9□□□□□ -0.5
DDX39B-220ENST00000482195 RPAINQ86UA6 219 aa11.9□□□□□ -0.5
DDX39B-220ENST00000482195 SMC5Q8IY18 1101 aa11.9□□□□□ -0.5
DDX39B-220ENST00000482195 FIBCD1Q8N539 461 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms