RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 SP4Q02446 784 aa12.05□□□□□ -0.48
SSBP1-210ENST00000481508 ITGB3BPQ13352 177 aaPredicted RBP12.05□□□□□ -0.48
SSBP1-210ENST00000481508 MTMR1Q13613 665 aa12.05□□□□□ -0.48
SSBP1-210ENST00000481508 INF2Q27J81 1249 aa12.05□□□□□ -0.48
SSBP1-210ENST00000481508 CEP55Q53EZ4 464 aa12.05□□□□□ -0.48
SSBP1-210ENST00000481508 FAM109BQ6ICB4 259 aaPredicted RBP12.05□□□□□ -0.48
SSBP1-210ENST00000481508 CYFIP1Q7L576 1253 aa12.05□□□□□ -0.48
SSBP1-210ENST00000481508 USP38Q8NB14 1042 aa12.05□□□□□ -0.48
SSBP1-210ENST00000481508 PCSK9Q8NBP7 692 aaKnown RBP12.05□□□□□ -0.48
SSBP1-210ENST00000481508 PPTC7Q8NI37 304 aa12.05□□□□□ -0.48
SSBP1-210ENST00000481508 BICD2Q8TD16 824 aa12.05□□□□□ -0.48
SSBP1-210ENST00000481508 TBCKQ8TEA7 893 aa12.05□□□□□ -0.48
SSBP1-210ENST00000481508 KAT2BQ92831 832 aa12.05□□□□□ -0.48
SSBP1-210ENST00000481508 GJA10Q969M2 543 aa12.05□□□□□ -0.48
SSBP1-210ENST00000481508 SPATA33Q96N06 139 aa12.05□□□□□ -0.48
SSBP1-210ENST00000481508 AGO4Q9HCK5 861 aaKnown RBP12.05□□□□□ -0.48
SSBP1-210ENST00000481508 KCNH7Q9NS40 1196 aa12.05□□□□□ -0.48
SSBP1-210ENST00000481508 ATP11BQ9Y2G3 1177 aa12.05□□□□□ -0.48
SSBP1-210ENST00000481508 BTBD18B2RXH4 712 aa12.04□□□□□ -0.48
SSBP1-210ENST00000481508 TGFB3P10600 412 aa12.04□□□□□ -0.48
SSBP1-210ENST00000481508 HOXD8P13378 290 aaPredicted RBP12.04□□□□□ -0.48
SSBP1-210ENST00000481508 CIITAP33076 1130 aa12.04□□□□□ -0.48
SSBP1-210ENST00000481508 CPT1AP50416 773 aa12.04□□□□□ -0.48
SSBP1-210ENST00000481508 CDK7P50613 346 aa12.04□□□□□ -0.48
SSBP1-210ENST00000481508 PDAP1Q13442 181 aaKnown RBP12.04□□□□□ -0.48
SSBP1-210ENST00000481508 LAMC2Q13753 1193 aa12.04□□□□□ -0.48
SSBP1-210ENST00000481508 GALNT17Q6IS24 598 aa12.04□□□□□ -0.48
SSBP1-210ENST00000481508 KCNV1Q6PIU1 500 aa12.04□□□□□ -0.48
SSBP1-210ENST00000481508 PIK3AP1Q6ZUJ8 805 aa12.04□□□□□ -0.48
SSBP1-210ENST00000481508 SH3RF1Q7Z6J0 888 aa12.04□□□□□ -0.48
SSBP1-210ENST00000481508 PLA2G4DQ86XP0 818 aa12.04□□□□□ -0.48
SSBP1-210ENST00000481508 TRIM50Q86XT4 487 aa12.04□□□□□ -0.48
SSBP1-210ENST00000481508 FAM177A1Q8N128 213 aaPredicted RBP12.04□□□□□ -0.48
SSBP1-210ENST00000481508 GPR20Q99678 358 aa12.04□□□□□ -0.48
SSBP1-210ENST00000481508 MYH9P35579 1960 aaKnown RBP12.04□□□□□ -0.48
SSBP1-210ENST00000481508 GBF1Q92538 1859 aa12.04□□□□□ -0.48
SSBP1-210ENST00000481508 A0A0U1RQG5 324 aaPredicted RBP12.03□□□□□ -0.48
SSBP1-210ENST00000481508 KIF28PB7ZC32 967 aa12.03□□□□□ -0.48
SSBP1-210ENST00000481508 DDX39AO00148 427 aaKnown RBP12.03□□□□□ -0.48
SSBP1-210ENST00000481508 SLC37A4O43826 429 aa12.03□□□□□ -0.48
SSBP1-210ENST00000481508 ZEB2O60315 1214 aa12.03□□□□□ -0.48
SSBP1-210ENST00000481508 PQBP1O60828 265 aaKnown RBP12.03□□□□□ -0.48
SSBP1-210ENST00000481508 KRT2P35908 639 aa12.03□□□□□ -0.48
SSBP1-210ENST00000481508 ZNF76P36508 570 aa12.03□□□□□ -0.48
SSBP1-210ENST00000481508 MCM2P49736 904 aa12.03□□□□□ -0.48
SSBP1-210ENST00000481508 TLE2Q04725 743 aa12.03□□□□□ -0.48
SSBP1-210ENST00000481508 CUL4AQ13619 759 aa12.03□□□□□ -0.48
SSBP1-210ENST00000481508 ITGA7Q13683 1181 aa12.03□□□□□ -0.48
SSBP1-210ENST00000481508 NONOQ15233 471 aaKnown RBP eCLIP12.03□□□□□ -0.48
SSBP1-210ENST00000481508 PRR16Q569H4 304 aa12.03□□□□□ -0.48
SSBP1-210ENST00000481508 METTL7BQ6UX53 244 aa12.03□□□□□ -0.48
SSBP1-210ENST00000481508 NIPA1Q7RTP0 329 aa12.03□□□□□ -0.48
SSBP1-210ENST00000481508 KRT25Q7Z3Z0 450 aa12.03□□□□□ -0.48
SSBP1-210ENST00000481508 DIS3L2Q8IYB7 885 aaKnown RBP12.03□□□□□ -0.48
SSBP1-210ENST00000481508 SLC43A3Q8NBI5 491 aa12.03□□□□□ -0.48
SSBP1-210ENST00000481508 C8orf76Q96K31 380 aa12.03□□□□□ -0.48
SSBP1-210ENST00000481508 GLT1D1Q96MS3 346 aa12.03□□□□□ -0.48
SSBP1-210ENST00000481508 SENP7Q9BQF6 1050 aa12.03□□□□□ -0.48
SSBP1-210ENST00000481508 C16orf70Q9BSU1 422 aa12.03□□□□□ -0.48
SSBP1-210ENST00000481508 MTG1Q9BT17 334 aaPredicted RBP12.03□□□□□ -0.48
SSBP1-210ENST00000481508 TTYH1Q9H313 450 aaPredicted RBP12.03□□□□□ -0.48
SSBP1-210ENST00000481508 MLXIPQ9HAP2 919 aa12.03□□□□□ -0.48
SSBP1-210ENST00000481508 CIZ1Q9ULV3 898 aaPredicted RBP12.03□□□□□ -0.48
SSBP1-210ENST00000481508 ELP1O95163 1332 aa12.03□□□□□ -0.48
SSBP1-210ENST00000481508 SCN5AQ14524 2016 aa12.03□□□□□ -0.48
SSBP1-210ENST00000481508 KAT6AQ92794 2004 aa12.03□□□□□ -0.48
SSBP1-210ENST00000481508 GSTTP1A0A1W2PQM5 241 aa12.02□□□□□ -0.49
SSBP1-210ENST00000481508 TRIM43BA6NCK2 446 aa12.02□□□□□ -0.49
SSBP1-210ENST00000481508 ARVCFO00192 962 aa12.02□□□□□ -0.49
SSBP1-210ENST00000481508 MSH4O15457 936 aa12.02□□□□□ -0.49
SSBP1-210ENST00000481508 DHX15O43143 795 aaKnown RBP12.02□□□□□ -0.49
SSBP1-210ENST00000481508 CCNE2O96020 404 aa12.02□□□□□ -0.49
SSBP1-210ENST00000481508 LGALS2P05162 132 aa12.02□□□□□ -0.49
SSBP1-210ENST00000481508 XBP1P17861 261 aa12.02□□□□□ -0.49
SSBP1-210ENST00000481508 GJB2P29033 226 aa12.02□□□□□ -0.49
SSBP1-210ENST00000481508 HMGN5P82970 282 aaKnown RBP12.02□□□□□ -0.49
SSBP1-210ENST00000481508 NEDD9Q14511 834 aa12.02□□□□□ -0.49
SSBP1-210ENST00000481508 HIC1Q14526 733 aa12.02□□□□□ -0.49
SSBP1-210ENST00000481508 NBPF20Q3BBV1 942 aa12.02□□□□□ -0.49
SSBP1-210ENST00000481508 C1orf53Q5VUE5 145 aa12.02□□□□□ -0.49
SSBP1-210ENST00000481508 MCTP2Q6DN12 878 aa12.02□□□□□ -0.49
SSBP1-210ENST00000481508 FAM126BQ8IXS8 530 aa12.02□□□□□ -0.49
SSBP1-210ENST00000481508 PDCD7Q8N8D1 485 aaKnown RBP12.02□□□□□ -0.49
SSBP1-210ENST00000481508 SYMPKQ92797 1274 aaKnown RBP12.02□□□□□ -0.49
SSBP1-210ENST00000481508 VTI1AQ96AJ9 217 aa12.02□□□□□ -0.49
SSBP1-210ENST00000481508 TRIM43Q96BQ3 446 aaPredicted RBP12.02□□□□□ -0.49
SSBP1-210ENST00000481508 MBOAT7Q96N66 472 aa12.02□□□□□ -0.49
SSBP1-210ENST00000481508 PCYT2Q99447 389 aa12.02□□□□□ -0.49
SSBP1-210ENST00000481508 PDLIM7Q9NR12 457 aa12.02□□□□□ -0.49
SSBP1-210ENST00000481508 POLR3EQ9NVU0 708 aa12.02□□□□□ -0.49
SSBP1-210ENST00000481508 TANC1Q9C0D5 1861 aa12.02□□□□□ -0.49
SSBP1-210ENST00000481508 CACNA1AO00555 2505 aa12.01□□□□□ -0.49
SSBP1-210ENST00000481508 CCDC194A0A1B0GVG4 234 aa12.01□□□□□ -0.49
SSBP1-210ENST00000481508 HAS3O00219 553 aa12.01□□□□□ -0.49
SSBP1-210ENST00000481508 CABYRO75952 493 aa12.01□□□□□ -0.49
SSBP1-210ENST00000481508 F2P00734 622 aa12.01□□□□□ -0.49
SSBP1-210ENST00000481508 FOSL2P15408 326 aa12.01□□□□□ -0.49
SSBP1-210ENST00000481508 ITGB8P26012 769 aa12.01□□□□□ -0.49
SSBP1-210ENST00000481508 PSEN2P49810 448 aa12.01□□□□□ -0.49
SSBP1-210ENST00000481508 CHMP4BP1P59074 171 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms