RNA–Protein interactions for RNA: ENST00000481004.1

LINC02040-201, Transcript of long intergenic non-protein coding RNA 2040, humanhuman

TSL 5 BASIC

Gene LINC02040, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02040-201ENST00000481004 ITGB2P05107 769 aa6.66□□□□□ -1.34
LINC02040-201ENST00000481004 POLR3DP05423 398 aaPredicted RBP6.66□□□□□ -1.34
LINC02040-201ENST00000481004 CDC27P30260 824 aa6.66□□□□□ -1.34
LINC02040-201ENST00000481004 GATA4P43694 442 aa6.66□□□□□ -1.34
LINC02040-201ENST00000481004 GJA8P48165 433 aa6.66□□□□□ -1.34
LINC02040-201ENST00000481004 GCLCP48506 637 aaPredicted RBP6.66□□□□□ -1.34
LINC02040-201ENST00000481004 CDK8P49336 464 aa6.66□□□□□ -1.34
LINC02040-201ENST00000481004 ERVK-24P63145 666 aa6.66□□□□□ -1.34
LINC02040-201ENST00000481004 ECM1Q16610 540 aa6.66□□□□□ -1.34
LINC02040-201ENST00000481004 CATSPERGQ6ZRH7 1159 aa6.66□□□□□ -1.34
LINC02040-201ENST00000481004 C16orf86Q6ZW13 317 aa6.66□□□□□ -1.34
LINC02040-201ENST00000481004 NBPF11Q86T75 865 aa6.66□□□□□ -1.34
LINC02040-201ENST00000481004 TTC6Q86TZ1 520 aa6.66□□□□□ -1.34
LINC02040-201ENST00000481004 CERS3Q8IU89 383 aa6.66□□□□□ -1.34
LINC02040-201ENST00000481004 DIS3LQ8TF46 1054 aaKnown RBP6.66□□□□□ -1.34
LINC02040-201ENST00000481004 U2AF1L4Q8WU68 220 aaKnown RBP6.66□□□□□ -1.34
LINC02040-201ENST00000481004 RNF208Q9H0X6 261 aa6.66□□□□□ -1.34
LINC02040-201ENST00000481004 RPAP3Q9H6T3 665 aaPredicted RBP6.66□□□□□ -1.34
LINC02040-201ENST00000481004 PAK6Q9NQU5 681 aaPredicted RBP6.66□□□□□ -1.34
LINC02040-201ENST00000481004 GINM1Q9NU53 330 aa6.66□□□□□ -1.34
LINC02040-201ENST00000481004 TMOD4Q9NZQ9 345 aa6.66□□□□□ -1.34
LINC02040-201ENST00000481004 FLRT1Q9NZU1 646 aa6.66□□□□□ -1.34
LINC02040-201ENST00000481004 SLC4A4Q9Y6R1 1079 aa6.66□□□□□ -1.34
LINC02040-201ENST00000481004 ROBO3Q96MS0 1386 aa6.66□□□□□ -1.34
LINC02040-201ENST00000481004 ZNFX1Q9P2E3 1918 aaKnown RBP6.66□□□□□ -1.34
LINC02040-201ENST00000481004 PLXNA1Q9UIW2 1896 aa6.65□□□□□ -1.34
LINC02040-201ENST00000481004 RNF113AO15541 343 aaKnown RBP6.65□□□□□ -1.34
LINC02040-201ENST00000481004 IGHDP01880 384 aa6.65□□□□□ -1.34
LINC02040-201ENST00000481004 GJB1P08034 283 aa6.65□□□□□ -1.34
LINC02040-201ENST00000481004 HOXD10P28358 340 aa6.65□□□□□ -1.34
LINC02040-201ENST00000481004 IRX3P78415 501 aaPredicted RBP6.65□□□□□ -1.34
LINC02040-201ENST00000481004 ARHGEF6Q15052 776 aa6.65□□□□□ -1.34
LINC02040-201ENST00000481004 MAP3K21Q5TCX8 1036 aa6.65□□□□□ -1.34
LINC02040-201ENST00000481004 CCDC129Q6ZRS4 1044 aa6.65□□□□□ -1.34
LINC02040-201ENST00000481004 GPR142Q7Z601 462 aa6.65□□□□□ -1.34
LINC02040-201ENST00000481004 SPICE1Q8N0Z3 855 aa6.65□□□□□ -1.34
LINC02040-201ENST00000481004 STK11IPQ8N1F8 1099 aa6.65□□□□□ -1.34
LINC02040-201ENST00000481004 GPRC5AQ8NFJ5 357 aa6.65□□□□□ -1.34
LINC02040-201ENST00000481004 DEFB118Q96PH6 123 aa6.65□□□□□ -1.34
LINC02040-201ENST00000481004 FEZ1Q99689 392 aa6.65□□□□□ -1.34
LINC02040-201ENST00000481004 PAGR1Q9BTK6 254 aa6.65□□□□□ -1.34
LINC02040-201ENST00000481004 KRTAP4-8Q9BYQ9 185 aa6.65□□□□□ -1.34
LINC02040-201ENST00000481004 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.65□□□□□ -1.34
LINC02040-201ENST00000481004 CHMP4BQ9H444 224 aaKnown RBP6.65□□□□□ -1.34
LINC02040-201ENST00000481004 ATP8A2Q9NTI2 1148 aa6.65□□□□□ -1.34
LINC02040-201ENST00000481004 IGKV6D-41A0A0C4DH26 115 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 H0YGN5 161 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 PDE2AO00408 941 aaPredicted RBP6.64□□□□□ -1.35
LINC02040-201ENST00000481004 MPHOSPH10O00566 681 aaKnown RBP6.64□□□□□ -1.35
LINC02040-201ENST00000481004 GPAA1O43292 621 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 SGPL1O95470 568 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 EEF2P13639 858 aaKnown RBP6.64□□□□□ -1.35
LINC02040-201ENST00000481004 PDIA4P13667 645 aaKnown RBP6.64□□□□□ -1.35
LINC02040-201ENST00000481004 CYP2B6P20813 491 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 CCND3P30281 292 aaPredicted RBP6.64□□□□□ -1.35
LINC02040-201ENST00000481004 PABPC4Q13310 644 aaKnown RBP eCLIP6.64□□□□□ -1.35
LINC02040-201ENST00000481004 XP32Q5T750 250 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 VPS53Q5VIR6 699 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 LBX2Q6XYB7 198 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 RASGRP2Q7LDG7 609 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 TRPV1Q8NER1 839 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 EXOC6Q8TAG9 804 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 APPBP2Q92624 585 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 COA7Q96BR5 231 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 LENG1Q96BZ8 264 aaPredicted RBP6.64□□□□□ -1.35
LINC02040-201ENST00000481004 DMRTB1Q96MA1 342 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 FAM129BQ96TA1 746 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.64□□□□□ -1.35
LINC02040-201ENST00000481004 INCENPQ9NQS7 918 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 FBXO28Q9NVF7 368 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 DZANK1Q9NVP4 752 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 TMX2Q9Y320 296 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 IVNS1ABPQ9Y6Y0 642 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 LAMA4Q16363 1823 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 LCTP09848 1927 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 TRIOBPQ9H2D6 2365 aa6.64□□□□□ -1.35
LINC02040-201ENST00000481004 SMCHD1A6NHR9 2005 aa6.63□□□□□ -1.35
LINC02040-201ENST00000481004 PRDM1O75626 825 aa6.63□□□□□ -1.35
LINC02040-201ENST00000481004 HMGCRP04035 888 aa6.63□□□□□ -1.35
LINC02040-201ENST00000481004 SELPP16109 830 aa6.63□□□□□ -1.35
LINC02040-201ENST00000481004 MX1P20591 662 aa6.63□□□□□ -1.35
LINC02040-201ENST00000481004 ICA1Q05084 483 aa6.63□□□□□ -1.35
LINC02040-201ENST00000481004 CACNB2Q08289 660 aaPredicted RBP6.63□□□□□ -1.35
LINC02040-201ENST00000481004 HDAC1Q13547 482 aaPredicted RBP6.63□□□□□ -1.35
LINC02040-201ENST00000481004 SBK1Q52WX2 424 aa6.63□□□□□ -1.35
LINC02040-201ENST00000481004 ZMYM1Q5SVZ6 1142 aa6.63□□□□□ -1.35
LINC02040-201ENST00000481004 TTC41PQ6P2S7 1318 aa6.63□□□□□ -1.35
LINC02040-201ENST00000481004 IGF2-ASQ6U949 168 aa6.63□□□□□ -1.35
LINC02040-201ENST00000481004 TMEM179Q6ZVK1 233 aa6.63□□□□□ -1.35
LINC02040-201ENST00000481004 PLEKHH3Q7Z736 793 aa6.63□□□□□ -1.35
LINC02040-201ENST00000481004 REPS2Q8NFH8 660 aa6.63□□□□□ -1.35
LINC02040-201ENST00000481004 NPLOC4Q8TAT6 608 aa6.63□□□□□ -1.35
LINC02040-201ENST00000481004 ATG4CQ96DT6 458 aa6.63□□□□□ -1.35
LINC02040-201ENST00000481004 NUP88Q99567 741 aaPredicted RBP6.63□□□□□ -1.35
LINC02040-201ENST00000481004 OSMRQ99650 979 aa6.63□□□□□ -1.35
LINC02040-201ENST00000481004 MOV10L1Q9BXT6 1211 aaKnown RBP6.63□□□□□ -1.35
LINC02040-201ENST00000481004 PRO3102Q9H379 93 aa6.63□□□□□ -1.35
LINC02040-201ENST00000481004 VCPKMTQ9H867 229 aa6.63□□□□□ -1.35
LINC02040-201ENST00000481004 CABP5Q9NP86 173 aa6.63□□□□□ -1.35
LINC02040-201ENST00000481004 STAP2Q9UGK3 403 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms