RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 NDUFV1P49821 464 aa23.5■■□□□ 1.35
PDLIM1-202ENST00000477757 TCF15Q12870 199 aa23.5■■□□□ 1.35
PDLIM1-202ENST00000477757 CAMK1Q14012 370 aa23.5■■□□□ 1.35
PDLIM1-202ENST00000477757 METTL7BQ6UX53 244 aa23.5■■□□□ 1.35
PDLIM1-202ENST00000477757 TRIM50Q86XT4 487 aa23.5■■□□□ 1.35
PDLIM1-202ENST00000477757 SUGP1Q8IWZ8 645 aaKnown RBP23.5■■□□□ 1.35
PDLIM1-202ENST00000477757 SMRP1Q8NCR6 262 aa23.5■■□□□ 1.35
PDLIM1-202ENST00000477757 ZNF689Q96CS4 500 aaPredicted RBP23.5■■□□□ 1.35
PDLIM1-202ENST00000477757 GPR20Q99678 358 aa23.5■■□□□ 1.35
PDLIM1-202ENST00000477757 EHMT1Q9H9B1 1298 aa23.5■■□□□ 1.35
PDLIM1-202ENST00000477757 ZNF215Q9UL58 517 aaPredicted RBP23.5■■□□□ 1.35
PDLIM1-202ENST00000477757 PCDHA1Q9Y5I3 950 aa23.5■■□□□ 1.35
PDLIM1-202ENST00000477757 B4E1Z4 1266 aa23.49■■□□□ 1.35
PDLIM1-202ENST00000477757 LOC730098B7Z3J9 87 aa23.49■■□□□ 1.35
PDLIM1-202ENST00000477757 ZBTB5O15062 677 aa23.49■■□□□ 1.35
PDLIM1-202ENST00000477757 CSPG5O95196 566 aa23.49■■□□□ 1.35
PDLIM1-202ENST00000477757 CHRNA1P02708 482 aa23.49■■□□□ 1.35
PDLIM1-202ENST00000477757 GHRP10912 638 aa23.49■■□□□ 1.35
PDLIM1-202ENST00000477757 MFAP1P55081 439 aaKnown RBP23.49■■□□□ 1.35
PDLIM1-202ENST00000477757 ARHGAP4P98171 946 aa23.49■■□□□ 1.35
PDLIM1-202ENST00000477757 BTG3Q14201 252 aaPredicted RBP23.49■■□□□ 1.35
PDLIM1-202ENST00000477757 GNPTABQ3T906 1256 aa23.49■■□□□ 1.35
PDLIM1-202ENST00000477757 STAG2Q8N3U4 1231 aa23.49■■□□□ 1.35
PDLIM1-202ENST00000477757 P2RX5Q93086 422 aa23.49■■□□□ 1.35
PDLIM1-202ENST00000477757 PPP2R3CQ969Q6 453 aa23.49■■□□□ 1.35
PDLIM1-202ENST00000477757 ZFP91Q96JP5 570 aaPredicted RBP23.49■■□□□ 1.35
PDLIM1-202ENST00000477757 ZBTB47Q9UFB7 747 aaPredicted RBP23.49■■□□□ 1.35
PDLIM1-202ENST00000477757 ZFHX2Q9C0A1 2572 aaPredicted RBP23.49■■□□□ 1.35
PDLIM1-202ENST00000477757 FRMPD4Q14CM0 1322 aa23.49■■□□□ 1.35
PDLIM1-202ENST00000477757 ICAM3P32942 547 aa23.48■■□□□ 1.35
PDLIM1-202ENST00000477757 ZXDAP98168 799 aa23.48■■□□□ 1.35
PDLIM1-202ENST00000477757 NEDD9Q14511 834 aa23.48■■□□□ 1.35
PDLIM1-202ENST00000477757 CBX2Q14781 532 aaPredicted RBP23.48■■□□□ 1.35
PDLIM1-202ENST00000477757 FBXL6Q8N531 539 aa23.48■■□□□ 1.35
PDLIM1-202ENST00000477757 EFHBQ8N7U6 833 aa23.48■■□□□ 1.35
PDLIM1-202ENST00000477757 INPP4AQ96PE3 977 aaPredicted RBP23.48■■□□□ 1.35
PDLIM1-202ENST00000477757 ALG13Q9NP73 1137 aaKnown RBP23.48■■□□□ 1.35
PDLIM1-202ENST00000477757 CLEC1BQ9P126 229 aa23.48■■□□□ 1.35
PDLIM1-202ENST00000477757 PLAGL2Q9UPG8 496 aa23.48■■□□□ 1.35
PDLIM1-202ENST00000477757 GCOM1H8Y6P7 765 aaPredicted RBP23.47■■□□□ 1.35
PDLIM1-202ENST00000477757 POLR2MP0CAP2 368 aa23.47■■□□□ 1.35
PDLIM1-202ENST00000477757 MGAT3Q09327 533 aa23.47■■□□□ 1.35
PDLIM1-202ENST00000477757 COASYQ13057 564 aa23.47■■□□□ 1.35
PDLIM1-202ENST00000477757 LPIN1Q14693 890 aa23.47■■□□□ 1.35
PDLIM1-202ENST00000477757 CYFIP1Q7L576 1253 aa23.47■■□□□ 1.35
PDLIM1-202ENST00000477757 NRCAMQ92823 1304 aa23.47■■□□□ 1.35
PDLIM1-202ENST00000477757 KIAA1671Q9BY89 1806 aa23.47■■□□□ 1.35
PDLIM1-202ENST00000477757 TTC3P53804 2025 aa23.47■■□□□ 1.35
PDLIM1-202ENST00000477757 KLRF2D3W0D1 207 aa23.46■■□□□ 1.35
PDLIM1-202ENST00000477757 STAM2O75886 525 aa23.46■■□□□ 1.35
PDLIM1-202ENST00000477757 DGKIO75912 1065 aa23.46■■□□□ 1.35
PDLIM1-202ENST00000477757 MRPS9P82933 396 aaKnown RBP23.46■■□□□ 1.35
PDLIM1-202ENST00000477757 SEMA3FQ13275 785 aa23.46■■□□□ 1.35
PDLIM1-202ENST00000477757 NAALADL2Q58DX5 795 aa23.46■■□□□ 1.35
PDLIM1-202ENST00000477757 ANKRD45Q5TZF3 282 aa23.46■■□□□ 1.35
PDLIM1-202ENST00000477757 TAF2Q6P1X5 1199 aa23.46■■□□□ 1.35
PDLIM1-202ENST00000477757 ZSWIM5Q9P217 1185 aa23.46■■□□□ 1.35
PDLIM1-202ENST00000477757 SUPT16HQ9Y5B9 1047 aaKnown RBP23.46■■□□□ 1.35
PDLIM1-202ENST00000477757 DOCK5Q9H7D0 1870 aa23.45■■□□□ 1.35
PDLIM1-202ENST00000477757 SPATA31C2B4DYI2 1134 aa23.45■■□□□ 1.34
PDLIM1-202ENST00000477757 ENPP3O14638 875 aa23.45■■□□□ 1.34
PDLIM1-202ENST00000477757 GFRA3O60609 400 aa23.45■■□□□ 1.34
PDLIM1-202ENST00000477757 DNAJB1P25685 340 aa23.45■■□□□ 1.34
PDLIM1-202ENST00000477757 RRP1P56182 461 aaKnown RBP23.45■■□□□ 1.34
PDLIM1-202ENST00000477757 RUFY4Q6ZNE9 571 aa23.45■■□□□ 1.34
PDLIM1-202ENST00000477757 ADGRD2Q7Z7M1 963 aa23.45■■□□□ 1.34
PDLIM1-202ENST00000477757 FCHSD1Q86WN1 690 aa23.45■■□□□ 1.34
PDLIM1-202ENST00000477757 UBAC1Q9BSL1 405 aa23.45■■□□□ 1.34
PDLIM1-202ENST00000477757 MRPL42Q9Y6G3 142 aaKnown RBP23.45■■□□□ 1.34
PDLIM1-202ENST00000477757 FIBPO43427 364 aa23.44■■□□□ 1.34
PDLIM1-202ENST00000477757 ITGB1P05556 798 aa23.44■■□□□ 1.34
PDLIM1-202ENST00000477757 TRAF1Q13077 416 aa23.44■■□□□ 1.34
PDLIM1-202ENST00000477757 CMTR2Q8IYT2 770 aaKnown RBP23.44■■□□□ 1.34
PDLIM1-202ENST00000477757 MAD2L2Q9UI95 211 aa23.44■■□□□ 1.34
PDLIM1-202ENST00000477757 USP15Q9Y4E8 981 aaPredicted RBP23.44■■□□□ 1.34
PDLIM1-202ENST00000477757 GLP2RO95838 553 aa23.43■■□□□ 1.34
PDLIM1-202ENST00000477757 SIGLEC14Q08ET2 396 aa23.43■■□□□ 1.34
PDLIM1-202ENST00000477757 SLC35G1Q2M3R5 365 aa23.43■■□□□ 1.34
PDLIM1-202ENST00000477757 FBXO47Q5MNV8 452 aa23.43■■□□□ 1.34
PDLIM1-202ENST00000477757 IFIT1BQ5T764 474 aaKnown RBP23.43■■□□□ 1.34
PDLIM1-202ENST00000477757 UTP14CQ5TAP6 766 aaKnown RBP23.43■■□□□ 1.34
PDLIM1-202ENST00000477757 TSHZ1Q6ZSZ6 1077 aa23.43■■□□□ 1.34
PDLIM1-202ENST00000477757 HOMER1Q86YM7 354 aa23.43■■□□□ 1.34
PDLIM1-202ENST00000477757 SPPL3Q8TCT6 385 aa23.43■■□□□ 1.34
PDLIM1-202ENST00000477757 LINC01599Q8WXQ3 324 aa23.43■■□□□ 1.34
PDLIM1-202ENST00000477757 TELO2Q9Y4R8 837 aa23.43■■□□□ 1.34
PDLIM1-202ENST00000477757 PALM3A6NDB9 673 aaPredicted RBP23.42■■□□□ 1.34
PDLIM1-202ENST00000477757 RSPH3Q86UC2 560 aa23.42■■□□□ 1.34
PDLIM1-202ENST00000477757 CRIPAKQ8N1N5 446 aa23.42■■□□□ 1.34
PDLIM1-202ENST00000477757 KRT23Q9C075 422 aa23.42■■□□□ 1.34
PDLIM1-202ENST00000477757 FAM86C1Q9NVL1 165 aa23.42■■□□□ 1.34
PDLIM1-202ENST00000477757 BARX2Q9UMQ3 279 aaPredicted RBP23.42■■□□□ 1.34
PDLIM1-202ENST00000477757 SPTBN4Q9H254 2564 aa23.41■■□□□ 1.34
PDLIM1-202ENST00000477757 SDSP20132 328 aa23.41■■□□□ 1.34
PDLIM1-202ENST00000477757 NRIP1P48552 1158 aa23.41■■□□□ 1.34
PDLIM1-202ENST00000477757 VCPP55072 806 aaKnown RBP23.41■■□□□ 1.34
PDLIM1-202ENST00000477757 ASIC4Q96FT7 647 aa23.41■■□□□ 1.34
PDLIM1-202ENST00000477757 PIGSQ96S52 555 aa23.41■■□□□ 1.34
PDLIM1-202ENST00000477757 SENP7Q9BQF6 1050 aa23.41■■□□□ 1.34
PDLIM1-202ENST00000477757 PHF7Q9BWX1 381 aaPredicted RBP23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms