RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 PARNO95453 639 aaKnown RBP16.12■□□□□ 0.17
PDE6D-204ENST00000477748 IQCF3P0C7M6 154 aa16.12■□□□□ 0.17
PDE6D-204ENST00000477748 ATP2A2P16615 1042 aaKnown RBP16.12■□□□□ 0.17
PDE6D-204ENST00000477748 ZNF76P36508 570 aa16.12■□□□□ 0.17
PDE6D-204ENST00000477748 SREBF1P36956 1147 aa16.12■□□□□ 0.17
PDE6D-204ENST00000477748 NEK4P51957 841 aa16.12■□□□□ 0.17
PDE6D-204ENST00000477748 SP4Q02446 784 aa16.12■□□□□ 0.17
PDE6D-204ENST00000477748 RBL2Q08999 1139 aa16.12■□□□□ 0.17
PDE6D-204ENST00000477748 SCRN1Q12765 414 aa16.12■□□□□ 0.17
PDE6D-204ENST00000477748 C8orf34Q49A92 452 aa16.12■□□□□ 0.17
PDE6D-204ENST00000477748 MCTP2Q6DN12 878 aa16.12■□□□□ 0.17
PDE6D-204ENST00000477748 DEFB128Q7Z7B8 93 aa16.12■□□□□ 0.17
PDE6D-204ENST00000477748 REXO1Q8N1G1 1221 aaKnown RBP16.12■□□□□ 0.17
PDE6D-204ENST00000477748 BICD2Q8TD16 824 aa16.12■□□□□ 0.17
PDE6D-204ENST00000477748 GPR20Q99678 358 aa16.12■□□□□ 0.17
PDE6D-204ENST00000477748 SLC28A3Q9HAS3 691 aa16.12■□□□□ 0.17
PDE6D-204ENST00000477748 SH3GLB2Q9NR46 395 aa16.12■□□□□ 0.17
PDE6D-204ENST00000477748 HDAC6Q9UBN7 1215 aa16.12■□□□□ 0.17
PDE6D-204ENST00000477748 PCDHA11Q9Y5I1 949 aa16.12■□□□□ 0.17
PDE6D-204ENST00000477748 HAS3O00219 553 aa16.11■□□□□ 0.17
PDE6D-204ENST00000477748 ADAMTS3O15072 1205 aa16.11■□□□□ 0.17
PDE6D-204ENST00000477748 PFKFB2O60825 505 aa16.11■□□□□ 0.17
PDE6D-204ENST00000477748 CDKL5O76039 1030 aa16.11■□□□□ 0.17
PDE6D-204ENST00000477748 LGALS2P05162 132 aa16.11■□□□□ 0.17
PDE6D-204ENST00000477748 KCNA2P16389 499 aa16.11■□□□□ 0.17
PDE6D-204ENST00000477748 NLRP5P59047 1200 aa16.11■□□□□ 0.17
PDE6D-204ENST00000477748 ARHGAP4P98171 946 aa16.11■□□□□ 0.17
PDE6D-204ENST00000477748 CEP55Q53EZ4 464 aa16.11■□□□□ 0.17
PDE6D-204ENST00000477748 GDF6Q6KF10 455 aaPredicted RBP16.11■□□□□ 0.17
PDE6D-204ENST00000477748 CYP2W1Q8TAV3 490 aa16.11■□□□□ 0.17
PDE6D-204ENST00000477748 SLC9A7Q96T83 725 aa16.11■□□□□ 0.17
PDE6D-204ENST00000477748 C16orf70Q9BSU1 422 aa16.11■□□□□ 0.17
PDE6D-204ENST00000477748 TANC1Q9C0D5 1861 aa16.11■□□□□ 0.17
PDE6D-204ENST00000477748 TRIP12Q14669 1992 aaPredicted RBP16.11■□□□□ 0.17
PDE6D-204ENST00000477748 H3BRB1 525 aa16.1■□□□□ 0.17
PDE6D-204ENST00000477748 BAIAP3O94812 1187 aa16.1■□□□□ 0.17
PDE6D-204ENST00000477748 SELPP16109 830 aa16.1■□□□□ 0.17
PDE6D-204ENST00000477748 UTP14CQ5TAP6 766 aaKnown RBP16.1■□□□□ 0.17
PDE6D-204ENST00000477748 PHOSPHO2Q8TCD6 241 aa16.1■□□□□ 0.17
PDE6D-204ENST00000477748 RASGRP4Q8TDF6 673 aa16.1■□□□□ 0.17
PDE6D-204ENST00000477748 CTAGE1Q96RT6 745 aa16.1■□□□□ 0.17
PDE6D-204ENST00000477748 FTOQ9C0B1 505 aaKnown RBP eCLIP16.1■□□□□ 0.17
PDE6D-204ENST00000477748 NKX2-4Q9H2Z4 354 aa16.1■□□□□ 0.17
PDE6D-204ENST00000477748 TUT1Q9H6E5 874 aaKnown RBP16.1■□□□□ 0.17
PDE6D-204ENST00000477748 KCNH7Q9NS40 1196 aa16.1■□□□□ 0.17
PDE6D-204ENST00000477748 YBX2Q9Y2T7 364 aaKnown RBP16.1■□□□□ 0.17
PDE6D-204ENST00000477748 TELO2Q9Y4R8 837 aa16.1■□□□□ 0.17
PDE6D-204ENST00000477748 ARP10275 920 aa16.09■□□□□ 0.17
PDE6D-204ENST00000477748 COL9A1P20849 921 aa16.09■□□□□ 0.17
PDE6D-204ENST00000477748 PPP2R2DQ66LE6 453 aa16.09■□□□□ 0.17
PDE6D-204ENST00000477748 LRRC8DQ7L1W4 858 aa16.09■□□□□ 0.17
PDE6D-204ENST00000477748 SEPT1Q8WYJ6 367 aa16.09■□□□□ 0.17
PDE6D-204ENST00000477748 AIFM3Q96NN9 605 aa16.09■□□□□ 0.17
PDE6D-204ENST00000477748 PRDM12Q9H4Q4 367 aa16.09■□□□□ 0.17
PDE6D-204ENST00000477748 KAT6AQ92794 2004 aa16.09■□□□□ 0.17
PDE6D-204ENST00000477748 MUC3AQ02505 3323 aa16.08■□□□□ 0.17
PDE6D-204ENST00000477748 MEIS1O00470 390 aa16.08■□□□□ 0.16
PDE6D-204ENST00000477748 CYP3A4P08684 503 aa16.08■□□□□ 0.16
PDE6D-204ENST00000477748 TCF7P36402 384 aaPredicted RBP16.08■□□□□ 0.16
PDE6D-204ENST00000477748 RABGGTBP53611 331 aa16.08■□□□□ 0.16
PDE6D-204ENST00000477748 PTK7Q13308 1070 aa16.08■□□□□ 0.16
PDE6D-204ENST00000477748 ME3Q16798 604 aa16.08■□□□□ 0.16
PDE6D-204ENST00000477748 NIPA1Q7RTP0 329 aa16.08■□□□□ 0.16
PDE6D-204ENST00000477748 PLA2G4DQ86XP0 818 aa16.08■□□□□ 0.16
PDE6D-204ENST00000477748 TRIM50Q86XT4 487 aa16.08■□□□□ 0.16
PDE6D-204ENST00000477748 NECAB1Q8N987 351 aa16.08■□□□□ 0.16
PDE6D-204ENST00000477748 DHX38Q92620 1227 aaKnown RBP16.08■□□□□ 0.16
PDE6D-204ENST00000477748 SDF4Q9BRK5 362 aa16.08■□□□□ 0.16
PDE6D-204ENST00000477748 AGO4Q9HCK5 861 aaKnown RBP16.08■□□□□ 0.16
PDE6D-204ENST00000477748 JPH1Q9HDC5 661 aaPredicted RBP16.08■□□□□ 0.16
PDE6D-204ENST00000477748 ZNF215Q9UL58 517 aaPredicted RBP16.08■□□□□ 0.16
PDE6D-204ENST00000477748 PCDHA4Q9UN74 947 aa16.08■□□□□ 0.16
PDE6D-204ENST00000477748 SCN5AQ14524 2016 aa16.07■□□□□ 0.16
PDE6D-204ENST00000477748 GSTTP1A0A1W2PQM5 241 aa16.07■□□□□ 0.16
PDE6D-204ENST00000477748 LARGE1O95461 756 aa16.07■□□□□ 0.16
PDE6D-204ENST00000477748 CKBP12277 381 aa16.07■□□□□ 0.16
PDE6D-204ENST00000477748 FAM177A1Q8N128 213 aaPredicted RBP16.07■□□□□ 0.16
PDE6D-204ENST00000477748 CRYGNQ8WXF5 182 aa16.07■□□□□ 0.16
PDE6D-204ENST00000477748 SLC9A2Q9UBY0 812 aa16.07■□□□□ 0.16
PDE6D-204ENST00000477748 NFASCO94856 1347 aa16.07■□□□□ 0.16
PDE6D-204ENST00000477748 STK36Q9NRP7 1315 aa16.07■□□□□ 0.16
PDE6D-204ENST00000477748 TRANK1O15050 2925 aa16.06■□□□□ 0.16
PDE6D-204ENST00000477748 C17orf102A2RUQ5 167 aa16.06■□□□□ 0.16
PDE6D-204ENST00000477748 KIF28PB7ZC32 967 aa16.06■□□□□ 0.16
PDE6D-204ENST00000477748 FAM86B1E9PN63 330 aa16.06■□□□□ 0.16
PDE6D-204ENST00000477748 DTNBO60941 627 aa16.06■□□□□ 0.16
PDE6D-204ENST00000477748 EFCAB14O75071 495 aa16.06■□□□□ 0.16
PDE6D-204ENST00000477748 CTDNEP1O95476 244 aa16.06■□□□□ 0.16
PDE6D-204ENST00000477748 CXCL10P02778 98 aa16.06■□□□□ 0.16
PDE6D-204ENST00000477748 FAM86B2P0C5J1 330 aa16.06■□□□□ 0.16
PDE6D-204ENST00000477748 SMIM10L2AP0DMW4 78 aa16.06■□□□□ 0.16
PDE6D-204ENST00000477748 SMIM10L2BP0DMW5 78 aa16.06■□□□□ 0.16
PDE6D-204ENST00000477748 XBP1P17861 261 aa16.06■□□□□ 0.16
PDE6D-204ENST00000477748 KCNJ6P48051 423 aa16.06■□□□□ 0.16
PDE6D-204ENST00000477748 ZNF200P98182 395 aaPredicted RBP16.06■□□□□ 0.16
PDE6D-204ENST00000477748 BLIDQ8IZY5 108 aa16.06■□□□□ 0.16
PDE6D-204ENST00000477748 GTF3C6Q969F1 213 aa16.06■□□□□ 0.16
PDE6D-204ENST00000477748 C22orf23Q9BZE7 217 aa16.06■□□□□ 0.16
PDE6D-204ENST00000477748 ORC3Q9UBD5 711 aaPredicted RBP16.06■□□□□ 0.16
PDE6D-204ENST00000477748 EMSYQ7Z589 1322 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms