RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 SUPT20HL2P0C7V6 817 aa13.99□□□□□ -0.17
PRKD3-209ENST00000477132 FDPSP14324 419 aaKnown RBP13.99□□□□□ -0.17
PRKD3-209ENST00000477132 TCF7P36402 384 aaPredicted RBP13.99□□□□□ -0.17
PRKD3-209ENST00000477132 NLRP5P59047 1200 aa13.99□□□□□ -0.17
PRKD3-209ENST00000477132 UTP14CQ5TAP6 766 aaKnown RBP13.99□□□□□ -0.17
PRKD3-209ENST00000477132 CPLX2Q6PUV4 134 aaKnown RBP13.99□□□□□ -0.17
PRKD3-209ENST00000477132 TMEM199Q8N511 208 aa13.99□□□□□ -0.17
PRKD3-209ENST00000477132 C7orf31Q8N865 590 aa13.99□□□□□ -0.17
PRKD3-209ENST00000477132 GIMAP8Q8ND71 665 aaPredicted RBP13.99□□□□□ -0.17
PRKD3-209ENST00000477132 UIMC1Q96RL1 719 aa13.99□□□□□ -0.17
PRKD3-209ENST00000477132 TUT1Q9H6E5 874 aaKnown RBP13.99□□□□□ -0.17
PRKD3-209ENST00000477132 PCDHA4Q9UN74 947 aa13.99□□□□□ -0.17
PRKD3-209ENST00000477132 KCNJ14Q9UNX9 436 aa13.99□□□□□ -0.17
PRKD3-209ENST00000477132 PTPRSQ13332 1948 aa13.98□□□□□ -0.17
PRKD3-209ENST00000477132 MAFGO15525 162 aa13.98□□□□□ -0.17
PRKD3-209ENST00000477132 SMIM10L2AP0DMW4 78 aa13.98□□□□□ -0.17
PRKD3-209ENST00000477132 SMIM10L2BP0DMW5 78 aa13.98□□□□□ -0.17
PRKD3-209ENST00000477132 HOXC8P31273 242 aa13.98□□□□□ -0.17
PRKD3-209ENST00000477132 RBM25P49756 843 aaKnown RBP13.98□□□□□ -0.17
PRKD3-209ENST00000477132 PPIGQ13427 754 aaKnown RBP eCLIP13.98□□□□□ -0.17
PRKD3-209ENST00000477132 TMEM240Q5SV17 173 aa13.98□□□□□ -0.17
PRKD3-209ENST00000477132 NIPA1Q7RTP0 329 aa13.98□□□□□ -0.17
PRKD3-209ENST00000477132 LENG9Q96B70 501 aa13.98□□□□□ -0.17
PRKD3-209ENST00000477132 RNPC3Q96LT9 517 aaKnown RBP13.98□□□□□ -0.17
PRKD3-209ENST00000477132 PCYT2Q99447 389 aa13.98□□□□□ -0.17
PRKD3-209ENST00000477132 C22orf23Q9BZE7 217 aa13.98□□□□□ -0.17
PRKD3-209ENST00000477132 JPH1Q9HDC5 661 aaPredicted RBP13.98□□□□□ -0.17
PRKD3-209ENST00000477132 LAMA2P24043 3122 aaKnown RBP13.97□□□□□ -0.17
PRKD3-209ENST00000477132 NFASCO94856 1347 aa13.97□□□□□ -0.17
PRKD3-209ENST00000477132 JAK2O60674 1132 aa13.97□□□□□ -0.17
PRKD3-209ENST00000477132 CDKL5O76039 1030 aa13.97□□□□□ -0.17
PRKD3-209ENST00000477132 CD44P16070 742 aaKnown RBP13.97□□□□□ -0.17
PRKD3-209ENST00000477132 ZNF76P36508 570 aa13.97□□□□□ -0.17
PRKD3-209ENST00000477132 TRIM71Q2Q1W2 868 aaKnown RBP13.97□□□□□ -0.17
PRKD3-209ENST00000477132 ZNF365Q70YC5 407 aa13.97□□□□□ -0.17
PRKD3-209ENST00000477132 PLA2G4DQ86XP0 818 aa13.97□□□□□ -0.17
PRKD3-209ENST00000477132 BLIDQ8IZY5 108 aa13.97□□□□□ -0.17
PRKD3-209ENST00000477132 DAGLBQ8NCG7 672 aa13.97□□□□□ -0.17
PRKD3-209ENST00000477132 NSUN7Q8NE18 718 aaKnown RBP13.97□□□□□ -0.17
PRKD3-209ENST00000477132 BICD2Q8TD16 824 aa13.97□□□□□ -0.17
PRKD3-209ENST00000477132 SEPT1Q8WYJ6 367 aa13.97□□□□□ -0.17
PRKD3-209ENST00000477132 PHF20Q9BVI0 1012 aa13.97□□□□□ -0.17
PRKD3-209ENST00000477132 RNPEPQ9H4A4 650 aa13.97□□□□□ -0.17
PRKD3-209ENST00000477132 IL23AQ9NPF7 189 aa13.97□□□□□ -0.17
PRKD3-209ENST00000477132 SLC9A2Q9UBY0 812 aa13.97□□□□□ -0.17
PRKD3-209ENST00000477132 NOD1Q9Y239 953 aa13.97□□□□□ -0.17
PRKD3-209ENST00000477132 DDX39AO00148 427 aaKnown RBP13.96□□□□□ -0.17
PRKD3-209ENST00000477132 DHX15O43143 795 aaKnown RBP13.96□□□□□ -0.17
PRKD3-209ENST00000477132 CCNE2O96020 404 aa13.96□□□□□ -0.17
PRKD3-209ENST00000477132 IQCF3P0C7M6 154 aa13.96□□□□□ -0.17
PRKD3-209ENST00000477132 MARK3P27448 753 aa13.96□□□□□ -0.17
PRKD3-209ENST00000477132 CIITAP33076 1130 aa13.96□□□□□ -0.17
PRKD3-209ENST00000477132 ACTR2P61160 394 aa13.96□□□□□ -0.17
PRKD3-209ENST00000477132 RBL2Q08999 1139 aa13.96□□□□□ -0.17
PRKD3-209ENST00000477132 GPNMBQ14956 572 aa13.96□□□□□ -0.17
PRKD3-209ENST00000477132 RASIP1Q5U651 963 aa13.96□□□□□ -0.17
PRKD3-209ENST00000477132 MCTP2Q6DN12 878 aa13.96□□□□□ -0.17
PRKD3-209ENST00000477132 FAM109BQ6ICB4 259 aaPredicted RBP13.96□□□□□ -0.17
PRKD3-209ENST00000477132 TRAF7Q6Q0C0 670 aa13.96□□□□□ -0.17
PRKD3-209ENST00000477132 ORC3Q9UBD5 711 aaPredicted RBP13.96□□□□□ -0.17
PRKD3-209ENST00000477132 MYH9P35579 1960 aaKnown RBP13.96□□□□□ -0.18
PRKD3-209ENST00000477132 EMSYQ7Z589 1322 aa13.95□□□□□ -0.18
PRKD3-209ENST00000477132 TREHO43280 583 aa13.95□□□□□ -0.18
PRKD3-209ENST00000477132 LGR5O75473 907 aa13.95□□□□□ -0.18
PRKD3-209ENST00000477132 ADAM17P78536 824 aa13.95□□□□□ -0.18
PRKD3-209ENST00000477132 PTK7Q13308 1070 aa13.95□□□□□ -0.18
PRKD3-209ENST00000477132 BFSP2Q13515 415 aa13.95□□□□□ -0.18
PRKD3-209ENST00000477132 PRR16Q569H4 304 aa13.95□□□□□ -0.18
PRKD3-209ENST00000477132 PSRC1Q6PGN9 363 aaPredicted RBP13.95□□□□□ -0.18
PRKD3-209ENST00000477132 Q7L0L9 218 aa13.95□□□□□ -0.18
PRKD3-209ENST00000477132 DEFB128Q7Z7B8 93 aa13.95□□□□□ -0.18
PRKD3-209ENST00000477132 SERINC5Q86VE9 423 aa13.95□□□□□ -0.18
PRKD3-209ENST00000477132 OXER1Q8TDS5 423 aa13.95□□□□□ -0.18
PRKD3-209ENST00000477132 TBCKQ8TEA7 893 aa13.95□□□□□ -0.18
PRKD3-209ENST00000477132 LMBR1Q8WVP7 490 aa13.95□□□□□ -0.18
PRKD3-209ENST00000477132 SDF4Q9BRK5 362 aa13.95□□□□□ -0.18
PRKD3-209ENST00000477132 SETD4Q9NVD3 440 aa13.95□□□□□ -0.18
PRKD3-209ENST00000477132 CXXC1Q9P0U4 656 aaPredicted RBP13.95□□□□□ -0.18
PRKD3-209ENST00000477132 ZNF215Q9UL58 517 aaPredicted RBP13.95□□□□□ -0.18
PRKD3-209ENST00000477132 C17orf102A2RUQ5 167 aa13.94□□□□□ -0.18
PRKD3-209ENST00000477132 IPO5O00410 1097 aaKnown RBP13.94□□□□□ -0.18
PRKD3-209ENST00000477132 TDP2O95551 362 aa13.94□□□□□ -0.18
PRKD3-209ENST00000477132 CKBP12277 381 aa13.94□□□□□ -0.18
PRKD3-209ENST00000477132 SETQ01105 290 aaPredicted RBP13.94□□□□□ -0.18
PRKD3-209ENST00000477132 EARS2Q5JPH6 523 aaKnown RBP13.94□□□□□ -0.18
PRKD3-209ENST00000477132 LRRC8DQ7L1W4 858 aa13.94□□□□□ -0.18
PRKD3-209ENST00000477132 OTOP2Q7RTS6 562 aa13.94□□□□□ -0.18
PRKD3-209ENST00000477132 FAM177A1Q8N128 213 aaPredicted RBP13.94□□□□□ -0.18
PRKD3-209ENST00000477132 CAGE1Q8TC20 777 aa13.94□□□□□ -0.18
PRKD3-209ENST00000477132 HERVK_113Q902F9 699 aa13.94□□□□□ -0.18
PRKD3-209ENST00000477132 ATP6V0A1Q93050 837 aa13.94□□□□□ -0.18
PRKD3-209ENST00000477132 GJA10Q969M2 543 aa13.94□□□□□ -0.18
PRKD3-209ENST00000477132 ZNF577Q9BSK1 485 aa13.94□□□□□ -0.18
PRKD3-209ENST00000477132 LIMCH1Q9UPQ0 1083 aa13.94□□□□□ -0.18
PRKD3-209ENST00000477132 IGKV6D-21A0A0A0MT36 114 aa13.93□□□□□ -0.18
PRKD3-209ENST00000477132 FAM205CA6NFA0 338 aa13.93□□□□□ -0.18
PRKD3-209ENST00000477132 GRXCR1A8MXD5 290 aa13.93□□□□□ -0.18
PRKD3-209ENST00000477132 MSH4O15457 936 aa13.93□□□□□ -0.18
PRKD3-209ENST00000477132 NBNO60934 754 aa13.93□□□□□ -0.18
PRKD3-209ENST00000477132 ATG7O95352 703 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms